RNA–Protein interactions for RNA: ENST00000369984.4

HCFC1-202, Transcript of host cell factor C1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HCFC1, Length 8,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-202ENST00000369984 CYB5R4Q7L1T6 521 aa13.06□□□□□ -0.32
HCFC1-202ENST00000369984 KRT77Q7Z794 578 aa13.06□□□□□ -0.32
HCFC1-202ENST00000369984 INAQ16352 499 aa13.06□□□□□ -0.32
HCFC1-202ENST00000369984 BTBD8Q5XKL5 378 aa13.06□□□□□ -0.32
HCFC1-202ENST00000369984 SWSAP1Q6NVH7 229 aa13.06□□□□□ -0.32
HCFC1-202ENST00000369984 PRUNE1Q86TP1 453 aa13.06□□□□□ -0.32
HCFC1-202ENST00000369984 AGPAT1Q99943 283 aa13.06□□□□□ -0.32
HCFC1-202ENST00000369984 IL1RL2Q9HB29 575 aa13.06□□□□□ -0.32
HCFC1-202ENST00000369984 PIH1D3Q9NQM4 214 aaKnown RBP13.06□□□□□ -0.32
HCFC1-202ENST00000369984 ZC3H4Q9UPT8 1303 aaKnown RBP13.06□□□□□ -0.32
HCFC1-202ENST00000369984 STAT3P40763 770 aa13.05□□□□□ -0.32
HCFC1-202ENST00000369984 CDK17Q00537 523 aa13.05□□□□□ -0.32
HCFC1-202ENST00000369984 KCNK16Q96T55 309 aa13.05□□□□□ -0.32
HCFC1-202ENST00000369984 POLD4Q9HCU8 107 aa13.05□□□□□ -0.32
HCFC1-202ENST00000369984 A8MXQ7 604 aa13.05□□□□□ -0.32
HCFC1-202ENST00000369984 XPO1O14980 1071 aaKnown RBP13.05□□□□□ -0.32
HCFC1-202ENST00000369984 NCALDP61601 193 aa13.05□□□□□ -0.32
HCFC1-202ENST00000369984 ORC2Q13416 577 aaPredicted RBP13.05□□□□□ -0.32
HCFC1-202ENST00000369984 ADAM33Q9BZ11 813 aa13.05□□□□□ -0.32
HCFC1-202ENST00000369984 GABBR1Q9UBS5 961 aa13.05□□□□□ -0.32
HCFC1-202ENST00000369984 PLEKHG1Q9ULL1 1385 aa13.05□□□□□ -0.32
HCFC1-202ENST00000369984 NMT2O60551 498 aa13.05□□□□□ -0.32
HCFC1-202ENST00000369984 CENPAP49450 140 aa13.05□□□□□ -0.32
HCFC1-202ENST00000369984 TRIM25Q14258 630 aaKnown RBP13.05□□□□□ -0.32
HCFC1-202ENST00000369984 PPP1R18Q6NYC8 613 aa13.05□□□□□ -0.32
HCFC1-202ENST00000369984 MARCH10Q8NA82 808 aaPredicted RBP13.05□□□□□ -0.32
HCFC1-202ENST00000369984 ARHGEF26Q96DR7 871 aa13.05□□□□□ -0.32
HCFC1-202ENST00000369984 C19orf60Q96EN9 201 aa13.05□□□□□ -0.32
HCFC1-202ENST00000369984 SENP7Q9BQF6 1050 aa13.05□□□□□ -0.32
HCFC1-202ENST00000369984 BBS2Q9BXC9 721 aa13.05□□□□□ -0.32
HCFC1-202ENST00000369984 PARVBQ9HBI1 364 aa13.05□□□□□ -0.32
HCFC1-202ENST00000369984 BSDC1Q9NW68 430 aaPredicted RBP13.05□□□□□ -0.32
HCFC1-202ENST00000369984 ARHGEF38Q9NXL2 777 aa13.05□□□□□ -0.32
HCFC1-202ENST00000369984 ZC3H7BQ9UGR2 993 aaKnown RBP13.05□□□□□ -0.32
HCFC1-202ENST00000369984 TTLL4Q14679 1199 aa13.05□□□□□ -0.32
HCFC1-202ENST00000369984 ADGRF4Q8IZF3 695 aa13.05□□□□□ -0.32
HCFC1-202ENST00000369984 CXorf56Q9H5V9 222 aa13.05□□□□□ -0.32
HCFC1-202ENST00000369984 MAP3K20Q9NYL2 800 aaKnown RBP13.05□□□□□ -0.32
HCFC1-202ENST00000369984 AGO2Q9UKV8 859 aaKnown RBP13.05□□□□□ -0.32
HCFC1-202ENST00000369984 PKP3Q9Y446 797 aa13.05□□□□□ -0.32
HCFC1-202ENST00000369984 MYO3BQ8WXR4 1341 aa13.05□□□□□ -0.32
HCFC1-202ENST00000369984 SOX6P35712 828 aa13.05□□□□□ -0.32
HCFC1-202ENST00000369984 DSG1Q02413 1049 aa13.05□□□□□ -0.32
HCFC1-202ENST00000369984 CACNB2Q08289 660 aaPredicted RBP13.05□□□□□ -0.32
HCFC1-202ENST00000369984 SH2D3CQ8N5H7 860 aa13.05□□□□□ -0.32
HCFC1-202ENST00000369984 WDR24Q96S15 920 aa13.05□□□□□ -0.32
HCFC1-202ENST00000369984 HOXC10Q9NYD6 342 aa13.05□□□□□ -0.32
HCFC1-202ENST00000369984 TEX33O43247 280 aa13.05□□□□□ -0.32
HCFC1-202ENST00000369984 PPP1R37O75864 691 aa13.05□□□□□ -0.32
HCFC1-202ENST00000369984 GTF2H3Q13889 308 aa13.05□□□□□ -0.32
HCFC1-202ENST00000369984 GLYCTKQ8IVS8 523 aa13.05□□□□□ -0.32
HCFC1-202ENST00000369984 SLC30A5Q8TAD4 765 aa13.05□□□□□ -0.32
HCFC1-202ENST00000369984 RPRD1BQ9NQG5 326 aaKnown RBP13.05□□□□□ -0.32
HCFC1-202ENST00000369984 MRGBPQ9NV56 204 aa13.05□□□□□ -0.32
HCFC1-202ENST00000369984 NEU2Q9Y3R4 380 aa13.05□□□□□ -0.32
HCFC1-202ENST00000369984 PHF20L1A8MW92 1017 aa13.05□□□□□ -0.32
HCFC1-202ENST00000369984 RNF103O00237 685 aa13.05□□□□□ -0.32
HCFC1-202ENST00000369984 NDUFS3O75489 264 aa13.05□□□□□ -0.32
HCFC1-202ENST00000369984 KRT76Q01546 638 aa13.05□□□□□ -0.32
HCFC1-202ENST00000369984 DDX53Q86TM3 631 aaKnown RBP13.05□□□□□ -0.32
HCFC1-202ENST00000369984 TRIM69Q86WT6 500 aa13.05□□□□□ -0.32
HCFC1-202ENST00000369984 SNX31Q8N9S9 440 aa13.05□□□□□ -0.32
HCFC1-202ENST00000369984 TMC2Q8TDI7 906 aa13.05□□□□□ -0.32
HCFC1-202ENST00000369984 DNAJC9Q8WXX5 260 aa13.05□□□□□ -0.32
HCFC1-202ENST00000369984 HES6Q96HZ4 224 aa13.05□□□□□ -0.32
HCFC1-202ENST00000369984 CNDP1Q96KN2 507 aa13.05□□□□□ -0.32
HCFC1-202ENST00000369984 RAVER2Q9HCJ3 691 aaKnown RBP13.05□□□□□ -0.32
HCFC1-202ENST00000369984 RAB6BQ9NRW1 208 aa13.05□□□□□ -0.32
HCFC1-202ENST00000369984 BARHL2Q9NY43 387 aa13.05□□□□□ -0.32
HCFC1-202ENST00000369984 CD274Q9NZQ7 290 aa13.05□□□□□ -0.32
HCFC1-202ENST00000369984 SNX12Q9UMY4 172 aa13.05□□□□□ -0.32
HCFC1-202ENST00000369984 MTO1Q9Y2Z2 717 aaKnown RBP13.05□□□□□ -0.32
HCFC1-202ENST00000369984 V9GYQ6 96 aa13.05□□□□□ -0.32
HCFC1-202ENST00000369984 PSMD3O43242 534 aa13.04□□□□□ -0.32
HCFC1-202ENST00000369984 UBTFL6P0CB48 400 aaPredicted RBP13.04□□□□□ -0.32
HCFC1-202ENST00000369984 RAD51Q06609 339 aa13.04□□□□□ -0.32
HCFC1-202ENST00000369984 SKIV2LQ15477 1246 aaKnown RBP13.04□□□□□ -0.32
HCFC1-202ENST00000369984 MEI1Q5TIA1 1274 aa13.04□□□□□ -0.32
HCFC1-202ENST00000369984 ARHGAP17Q68EM7 881 aa13.04□□□□□ -0.32
HCFC1-202ENST00000369984 SNRNP48Q6IEG0 339 aaKnown RBP13.04□□□□□ -0.32
HCFC1-202ENST00000369984 ATPAF2Q8N5M1 289 aa13.04□□□□□ -0.32
HCFC1-202ENST00000369984 SPATA33Q96N06 139 aa13.04□□□□□ -0.32
HCFC1-202ENST00000369984 RBM15Q96T37 977 aaKnown RBP eCLIP13.04□□□□□ -0.322e-7■■■■□ 25.3
HCFC1-202ENST00000369984 OLFML3Q9NRN5 406 aa13.04□□□□□ -0.32
HCFC1-202ENST00000369984 C3orf70A6NLC5 250 aaPredicted RBP13.04□□□□□ -0.32
HCFC1-202ENST00000369984 GOLGA8TH3BQL2 631 aa13.04□□□□□ -0.32
HCFC1-202ENST00000369984 SRP72O76094 671 aaKnown RBP13.04□□□□□ -0.32
HCFC1-202ENST00000369984 LSP1P33241 339 aa13.04□□□□□ -0.32
HCFC1-202ENST00000369984 CCDC81Q6ZN84 652 aa13.04□□□□□ -0.32
HCFC1-202ENST00000369984 APPL2Q8NEU8 664 aa13.04□□□□□ -0.32
HCFC1-202ENST00000369984 PLEKHA5Q9HAU0 1116 aa13.04□□□□□ -0.32
HCFC1-202ENST00000369984 C3orf62Q6ZUJ4 267 aa13.04□□□□□ -0.32
HCFC1-202ENST00000369984 CPA5Q8WXQ8 436 aa13.04□□□□□ -0.32
HCFC1-202ENST00000369984 TMEM260Q9NX78 707 aa13.04□□□□□ -0.32
HCFC1-202ENST00000369984 CDH16O75309 829 aa13.04□□□□□ -0.32
HCFC1-202ENST00000369984 HIST1H2AGP0C0S8 130 aaPredicted RBP13.04□□□□□ -0.32
HCFC1-202ENST00000369984 HIST1H2ADP20671 130 aa13.04□□□□□ -0.32
HCFC1-202ENST00000369984 IFNEQ86WN2 208 aa13.04□□□□□ -0.32
HCFC1-202ENST00000369984 FOXP4Q8IVH2 680 aaPredicted RBP13.04□□□□□ -0.32
HCFC1-202ENST00000369984 HIST1H2AHQ96KK5 128 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms