RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 GNG11P61952 73 aa7.39□□□□□ -1.23
CSDE1-204ENST00000369530 GNGT1P63211 74 aa7.39□□□□□ -1.23
CSDE1-204ENST00000369530 APBA1Q02410 837 aa7.39□□□□□ -1.23
CSDE1-204ENST00000369530 ITIH3Q06033 890 aa7.39□□□□□ -1.23
CSDE1-204ENST00000369530 NNTQ13423 1086 aa7.39□□□□□ -1.23
CSDE1-204ENST00000369530 NONOQ15233 471 aaKnown RBP eCLIP7.39□□□□□ -1.232e-6■■□□□ 12.7
CSDE1-204ENST00000369530 INF2Q27J81 1249 aa7.39□□□□□ -1.23
CSDE1-204ENST00000369530 ALS2CLQ60I27 953 aa7.39□□□□□ -1.23
CSDE1-204ENST00000369530 SCARA3Q6AZY7 606 aa7.39□□□□□ -1.23
CSDE1-204ENST00000369530 TMEM199Q8N511 208 aa7.39□□□□□ -1.23
CSDE1-204ENST00000369530 NSMCE1Q8WV22 266 aa7.39□□□□□ -1.23
CSDE1-204ENST00000369530 AZIN2Q96A70 460 aa7.39□□□□□ -1.23
CSDE1-204ENST00000369530 JAKMIP2Q96AA8 810 aa7.39□□□□□ -1.23
CSDE1-204ENST00000369530 FBXL18Q96ME1 805 aa7.39□□□□□ -1.23
CSDE1-204ENST00000369530 TRAPPC9Q96Q05 1148 aa7.39□□□□□ -1.23
CSDE1-204ENST00000369530 ZNF577Q9BSK1 485 aa7.39□□□□□ -1.23
CSDE1-204ENST00000369530 GOLPH3LQ9H4A5 285 aa7.39□□□□□ -1.23
CSDE1-204ENST00000369530 TMEM134Q9H6X4 195 aa7.39□□□□□ -1.23
CSDE1-204ENST00000369530 RXFP1Q9HBX9 757 aa7.39□□□□□ -1.23
CSDE1-204ENST00000369530 DISC1Q9NRI5 854 aa7.39□□□□□ -1.23
CSDE1-204ENST00000369530 KBTBD4Q9NVX7 518 aa7.39□□□□□ -1.23
CSDE1-204ENST00000369530 ITGB1BP2Q9UKP3 347 aa7.39□□□□□ -1.23
CSDE1-204ENST00000369530 PCDHA7Q9UN72 937 aa7.39□□□□□ -1.23
CSDE1-204ENST00000369530 ARIH1Q9Y4X5 557 aaPredicted RBP7.39□□□□□ -1.23
CSDE1-204ENST00000369530 CDY2AQ9Y6F7 541 aa7.39□□□□□ -1.23
CSDE1-204ENST00000369530 PCDH15Q96QU1 1955 aa7.39□□□□□ -1.23
CSDE1-204ENST00000369530 ZNF106Q9H2Y7 1883 aaKnown RBP7.39□□□□□ -1.23
CSDE1-204ENST00000369530 GOLGA6L10A6NI86 522 aa7.39□□□□□ -1.23
CSDE1-204ENST00000369530 E2F6O75461 281 aa7.39□□□□□ -1.23
CSDE1-204ENST00000369530 ECM2O94769 699 aaPredicted RBP7.39□□□□□ -1.23
CSDE1-204ENST00000369530 PAEPP09466 180 aa7.39□□□□□ -1.23
CSDE1-204ENST00000369530 IGFBP6P24592 240 aaPredicted RBP7.39□□□□□ -1.23
CSDE1-204ENST00000369530 GGCXP38435 758 aa7.39□□□□□ -1.23
CSDE1-204ENST00000369530 RFC5P40937 340 aa7.39□□□□□ -1.23
CSDE1-204ENST00000369530 STAT5BP51692 787 aa7.39□□□□□ -1.23
CSDE1-204ENST00000369530 AFF1P51825 1210 aaKnown RBP7.39□□□□□ -1.23
CSDE1-204ENST00000369530 ELF3P78545 371 aaPredicted RBP7.39□□□□□ -1.23
CSDE1-204ENST00000369530 ENPEPQ07075 957 aa7.39□□□□□ -1.23
CSDE1-204ENST00000369530 IKQ13123 557 aaPredicted RBP7.39□□□□□ -1.23
CSDE1-204ENST00000369530 LRRC23Q53EV4 343 aaPredicted RBP7.39□□□□□ -1.23
CSDE1-204ENST00000369530 KLHL10Q6JEL2 608 aa7.39□□□□□ -1.23
CSDE1-204ENST00000369530 LILRA6Q6PI73 481 aa7.39□□□□□ -1.23
CSDE1-204ENST00000369530 COLGALT2Q8IYK4 626 aa7.39□□□□□ -1.23
CSDE1-204ENST00000369530 GBP7Q8N8V2 638 aaPredicted RBP7.39□□□□□ -1.23
CSDE1-204ENST00000369530 CCDC12Q8WUD4 166 aaPredicted RBP7.39□□□□□ -1.23
CSDE1-204ENST00000369530 NAP1L4Q99733 375 aaKnown RBP7.39□□□□□ -1.23
CSDE1-204ENST00000369530 NAA15Q9BXJ9 866 aaKnown RBP7.39□□□□□ -1.23
CSDE1-204ENST00000369530 ZNF302Q9NR11 478 aa7.39□□□□□ -1.23
CSDE1-204ENST00000369530 HOOK1Q9UJC3 728 aaKnown RBP7.39□□□□□ -1.23
CSDE1-204ENST00000369530 SPEGQ15772 3267 aa7.39□□□□□ -1.23
CSDE1-204ENST00000369530 PTGESO14684 152 aa7.39□□□□□ -1.23
CSDE1-204ENST00000369530 ZNF268Q14587 947 aaPredicted RBP7.39□□□□□ -1.23
CSDE1-204ENST00000369530 POSTNQ15063 836 aa7.39□□□□□ -1.23
CSDE1-204ENST00000369530 ACCSLQ4AC99 568 aa7.39□□□□□ -1.23
CSDE1-204ENST00000369530 XKR3Q5GH77 459 aa7.39□□□□□ -1.23
CSDE1-204ENST00000369530 FOXR2Q6PJQ5 311 aa7.39□□□□□ -1.23
CSDE1-204ENST00000369530 ZNF662Q6ZS27 426 aa7.39□□□□□ -1.23
CSDE1-204ENST00000369530 NPAS4Q8IUM7 802 aa7.39□□□□□ -1.23
CSDE1-204ENST00000369530 AOPEPQ8N6M6 819 aa7.39□□□□□ -1.23
CSDE1-204ENST00000369530 ACRBPQ8NEB7 543 aa7.39□□□□□ -1.23
CSDE1-204ENST00000369530 NDST4Q9H3R1 872 aa7.39□□□□□ -1.23
CSDE1-204ENST00000369530 NOD2Q9HC29 1040 aa7.39□□□□□ -1.23
CSDE1-204ENST00000369530 DOCK6Q96HP0 2047 aa7.38□□□□□ -1.23
CSDE1-204ENST00000369530 P4HBP07237 508 aaKnown RBP7.38□□□□□ -1.23
CSDE1-204ENST00000369530 EIF4BP23588 611 aaKnown RBP7.38□□□□□ -1.23
CSDE1-204ENST00000369530 SYKP43405 635 aa7.38□□□□□ -1.23
CSDE1-204ENST00000369530 WNT7BP56706 349 aa7.38□□□□□ -1.23
CSDE1-204ENST00000369530 PSMC5P62195 406 aa7.38□□□□□ -1.23
CSDE1-204ENST00000369530 FAM160A1Q05DH4 1040 aa7.38□□□□□ -1.23
CSDE1-204ENST00000369530 DBN1Q16643 649 aa7.38□□□□□ -1.23
CSDE1-204ENST00000369530 KBTBD12Q3ZCT8 623 aa7.38□□□□□ -1.23
CSDE1-204ENST00000369530 APBB1IPQ7Z5R6 666 aaPredicted RBP7.38□□□□□ -1.23
CSDE1-204ENST00000369530 LRRC43Q8N309 656 aa7.38□□□□□ -1.23
CSDE1-204ENST00000369530 OLIG1Q8TAK6 271 aa7.38□□□□□ -1.23
CSDE1-204ENST00000369530 SPIRE2Q8WWL2 714 aa7.38□□□□□ -1.23
CSDE1-204ENST00000369530 PIK3R5Q8WYR1 880 aa7.38□□□□□ -1.23
CSDE1-204ENST00000369530 PPP2R3CQ969Q6 453 aa7.38□□□□□ -1.23
CSDE1-204ENST00000369530 CCDC114Q96M63 670 aa7.38□□□□□ -1.23
CSDE1-204ENST00000369530 PANX2Q96RD6 677 aa7.38□□□□□ -1.23
CSDE1-204ENST00000369530 KCND2Q9NZV8 630 aa7.38□□□□□ -1.23
CSDE1-204ENST00000369530 IFNKQ9P0W0 207 aa7.38□□□□□ -1.23
CSDE1-204ENST00000369530 NME7Q9Y5B8 376 aa7.38□□□□□ -1.23
CSDE1-204ENST00000369530 MRPL42Q9Y6G3 142 aaKnown RBP7.38□□□□□ -1.23
CSDE1-204ENST00000369530 A0A1W2PQ27 194 aa7.38□□□□□ -1.23
CSDE1-204ENST00000369530 A0A1W2PQ64 194 aa7.38□□□□□ -1.23
CSDE1-204ENST00000369530 A0A1W2PQD8 194 aa7.38□□□□□ -1.23
CSDE1-204ENST00000369530 MEIS3P2A8K0S8 358 aa7.38□□□□□ -1.23
CSDE1-204ENST00000369530 MARCH6O60337 910 aa7.38□□□□□ -1.23
CSDE1-204ENST00000369530 PQBP1O60828 265 aaKnown RBP7.38□□□□□ -1.23
CSDE1-204ENST00000369530 WFS1O76024 890 aa7.38□□□□□ -1.23
CSDE1-204ENST00000369530 EOMESO95936 686 aa7.38□□□□□ -1.23
CSDE1-204ENST00000369530 ALDH3A1P30838 453 aa7.38□□□□□ -1.23
CSDE1-204ENST00000369530 ABL2P42684 1182 aa7.38□□□□□ -1.23
CSDE1-204ENST00000369530 BTG3Q14201 252 aaPredicted RBP7.38□□□□□ -1.23
CSDE1-204ENST00000369530 SMYD5Q6GMV2 418 aa7.38□□□□□ -1.23
CSDE1-204ENST00000369530 LCA5Q86VQ0 697 aa7.38□□□□□ -1.23
CSDE1-204ENST00000369530 SLFN12Q8IYM2 578 aa7.38□□□□□ -1.23
CSDE1-204ENST00000369530 CAVIN3Q969G5 261 aa7.38□□□□□ -1.23
CSDE1-204ENST00000369530 TSC22D3Q99576 134 aa7.38□□□□□ -1.23
CSDE1-204ENST00000369530 LRRC3Q9BY71 257 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms