RNA–Protein interactions for RNA: ENST00000368690.7

CHTOP-203, Transcript of chromatin target of PRMT1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CHTOP, Length 2,165 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-203ENST00000368690 MSH4O15457 936 aa18.5■□□□□ 0.55
CHTOP-203ENST00000368690 RPS6KA3P51812 740 aa18.5■□□□□ 0.55
CHTOP-203ENST00000368690 RASA2Q15283 850 aa18.5■□□□□ 0.55
CHTOP-203ENST00000368690 GNPTABQ3T906 1256 aa18.5■□□□□ 0.55
CHTOP-203ENST00000368690 ARHGEF19Q8IW93 802 aa18.5■□□□□ 0.55
CHTOP-203ENST00000368690 AGBL3Q8NEM8 1001 aa18.5■□□□□ 0.55
CHTOP-203ENST00000368690 STRA6Q9BX79 667 aa18.5■□□□□ 0.55
CHTOP-203ENST00000368690 FAM198AQ9UFP1 575 aa18.5■□□□□ 0.55
CHTOP-203ENST00000368690 SPDYE2BA6NHP3 402 aa18.49■□□□□ 0.55
CHTOP-203ENST00000368690 SIGLEC16A6NMB1 481 aa18.49■□□□□ 0.55
CHTOP-203ENST00000368690 SFI1A8K8P3 1242 aa18.49■□□□□ 0.55
CHTOP-203ENST00000368690 FAM86B1E9PN63 330 aa18.49■□□□□ 0.55
CHTOP-203ENST00000368690 CYP3A4P08684 503 aa18.49■□□□□ 0.55
CHTOP-203ENST00000368690 FAM86B2P0C5J1 330 aa18.49■□□□□ 0.55
CHTOP-203ENST00000368690 SPDYE6P0CI01 402 aa18.49■□□□□ 0.55
CHTOP-203ENST00000368690 EPHB2P29323 1055 aa18.49■□□□□ 0.55
CHTOP-203ENST00000368690 ADCY8P40145 1251 aa18.49■□□□□ 0.55
CHTOP-203ENST00000368690 CYP4A11Q02928 519 aa18.49■□□□□ 0.55
CHTOP-203ENST00000368690 DNAJC3Q13217 504 aa18.49■□□□□ 0.55
CHTOP-203ENST00000368690 TNIP1Q15025 636 aa18.49■□□□□ 0.55
CHTOP-203ENST00000368690 ZRSR2Q15696 482 aaKnown RBP18.49■□□□□ 0.55
CHTOP-203ENST00000368690 SLC5A9Q2M3M2 681 aa18.49■□□□□ 0.55
CHTOP-203ENST00000368690 MUM1Q2TAK8 710 aa18.49■□□□□ 0.55
CHTOP-203ENST00000368690 KCTD1Q719H9 257 aa18.49■□□□□ 0.55
CHTOP-203ENST00000368690 MAEAQ7L5Y9 396 aa18.49■□□□□ 0.55
CHTOP-203ENST00000368690 FAM178BQ8IXR5 827 aa18.49■□□□□ 0.55
CHTOP-203ENST00000368690 CCDC89Q8N998 374 aa18.49■□□□□ 0.55
CHTOP-203ENST00000368690 CFAP57Q96MR6 1250 aa18.49■□□□□ 0.55
CHTOP-203ENST00000368690 GMLQ99445 158 aa18.49■□□□□ 0.55
CHTOP-203ENST00000368690 IKZF4Q9H2S9 585 aa18.49■□□□□ 0.55
CHTOP-203ENST00000368690 CHST7Q9NS84 486 aa18.49■□□□□ 0.55
CHTOP-203ENST00000368690 TBK1Q9UHD2 729 aa18.49■□□□□ 0.55
CHTOP-203ENST00000368690 TCP10L2B9ZVM9 353 aa18.49■□□□□ 0.55
CHTOP-203ENST00000368690 HGSO14964 777 aaPredicted RBP18.49■□□□□ 0.55
CHTOP-203ENST00000368690 AP1G2O75843 785 aa18.49■□□□□ 0.55
CHTOP-203ENST00000368690 TUBP50607 506 aa18.49■□□□□ 0.55
CHTOP-203ENST00000368690 OR52E8Q6IFG1 317 aa18.49■□□□□ 0.55
CHTOP-203ENST00000368690 NOP9Q86U38 636 aaKnown RBP18.49■□□□□ 0.55
CHTOP-203ENST00000368690 LRRC8CQ8TDW0 803 aa18.49■□□□□ 0.55
CHTOP-203ENST00000368690 DCAF4Q8WV16 495 aa18.49■□□□□ 0.55
CHTOP-203ENST00000368690 ZNF653Q96CK0 615 aa18.49■□□□□ 0.55
CHTOP-203ENST00000368690 PDHA1P08559 390 aa18.48■□□□□ 0.55
CHTOP-203ENST00000368690 SLURP2P0DP57 97 aa18.48■□□□□ 0.55
CHTOP-203ENST00000368690 SKIP12755 728 aa18.48■□□□□ 0.55
CHTOP-203ENST00000368690 PTP4A2Q12974 167 aa18.48■□□□□ 0.55
CHTOP-203ENST00000368690 ZNF746Q6NUN9 644 aaPredicted RBP18.48■□□□□ 0.55
CHTOP-203ENST00000368690 C4orf50Q6ZRC1 276 aa18.48■□□□□ 0.55
CHTOP-203ENST00000368690 SEPT14Q6ZU15 432 aa18.48■□□□□ 0.55
CHTOP-203ENST00000368690 CLEC10AQ8IUN9 316 aa18.48■□□□□ 0.55
CHTOP-203ENST00000368690 C12orf56Q8IXR9 622 aa18.48■□□□□ 0.55
CHTOP-203ENST00000368690 TTC25Q96NG3 672 aa18.48■□□□□ 0.55
CHTOP-203ENST00000368690 IDI2Q9BXS1 227 aa18.48■□□□□ 0.55
CHTOP-203ENST00000368690 SCOCQ9UIL1 159 aa18.48■□□□□ 0.55
CHTOP-203ENST00000368690 C2CD2Q9Y426 696 aa18.48■□□□□ 0.55
CHTOP-203ENST00000368690 LOXHD1Q8IVV2 1947 aa18.48■□□□□ 0.55
CHTOP-203ENST00000368690 EMSYQ7Z589 1322 aa18.48■□□□□ 0.55
CHTOP-203ENST00000368690 DDTLA6NHG4 134 aaPredicted RBP18.48■□□□□ 0.55
CHTOP-203ENST00000368690 FAM196BA6NMK8 535 aa18.48■□□□□ 0.55
CHTOP-203ENST00000368690 EML1O00423 815 aa18.48■□□□□ 0.55
CHTOP-203ENST00000368690 ZWINTO95229 277 aa18.48■□□□□ 0.55
CHTOP-203ENST00000368690 SGPL1O95470 568 aa18.48■□□□□ 0.55
CHTOP-203ENST00000368690 SLC1A1P43005 524 aa18.48■□□□□ 0.55
CHTOP-203ENST00000368690 MCCD1P59942 119 aaPredicted RBP18.48■□□□□ 0.55
CHTOP-203ENST00000368690 FMO1Q01740 532 aa18.48■□□□□ 0.55
CHTOP-203ENST00000368690 SNX1Q13596 522 aa18.48■□□□□ 0.55
CHTOP-203ENST00000368690 RASA3Q14644 834 aa18.48■□□□□ 0.55
CHTOP-203ENST00000368690 TMED2Q15363 201 aa18.48■□□□□ 0.55
CHTOP-203ENST00000368690 RBM26Q5T8P6 1007 aaKnown RBP18.48■□□□□ 0.55
CHTOP-203ENST00000368690 ANKS1BQ7Z6G8 1248 aa18.48■□□□□ 0.55
CHTOP-203ENST00000368690 ZCCHC9Q8N567 271 aaKnown RBP18.48■□□□□ 0.55
CHTOP-203ENST00000368690 TTC8Q8TAM2 541 aa18.48■□□□□ 0.55
CHTOP-203ENST00000368690 BICD1Q96G01 975 aa18.48■□□□□ 0.55
CHTOP-203ENST00000368690 P2RX7Q99572 595 aaKnown RBP18.48■□□□□ 0.55
CHTOP-203ENST00000368690 SSU72Q9NP77 194 aaKnown RBP18.48■□□□□ 0.55
CHTOP-203ENST00000368690 NMRK1Q9NWW6 199 aa18.48■□□□□ 0.55
CHTOP-203ENST00000368690 KCNG1Q9UIX4 513 aa18.48■□□□□ 0.55
CHTOP-203ENST00000368690 LTBP3Q9NS15 1303 aa18.47■□□□□ 0.55
CHTOP-203ENST00000368690 ATMINO43313 823 aaPredicted RBP18.47■□□□□ 0.55
CHTOP-203ENST00000368690 VAMP7P51809 220 aa18.47■□□□□ 0.55
CHTOP-203ENST00000368690 PRELPP51888 382 aa18.47■□□□□ 0.55
CHTOP-203ENST00000368690 SESTD1Q86VW0 696 aa18.47■□□□□ 0.55
CHTOP-203ENST00000368690 BTBD6Q96KE9 485 aa18.47■□□□□ 0.55
CHTOP-203ENST00000368690 RGL1Q9NZL6 768 aa18.47■□□□□ 0.55
CHTOP-203ENST00000368690 ZFP69BQ9UJL9 534 aa18.47■□□□□ 0.55
CHTOP-203ENST00000368690 CCDC22O60826 627 aa18.47■□□□□ 0.55
CHTOP-203ENST00000368690 ENTPD5O75356 428 aa18.47■□□□□ 0.55
CHTOP-203ENST00000368690 MAGEA4P43358 317 aa18.47■□□□□ 0.55
CHTOP-203ENST00000368690 CCNG2Q16589 344 aa18.47■□□□□ 0.55
CHTOP-203ENST00000368690 SYDE2Q5VT97 1194 aa18.47■□□□□ 0.55
CHTOP-203ENST00000368690 CPNE8Q86YQ8 564 aa18.47■□□□□ 0.55
CHTOP-203ENST00000368690 KIFAP3Q92845 792 aa18.47■□□□□ 0.55
CHTOP-203ENST00000368690 PAIP2Q9BPZ3 127 aaKnown RBP18.47■□□□□ 0.55
CHTOP-203ENST00000368690 FAM192AQ9GZU8 254 aa18.47■□□□□ 0.55
CHTOP-203ENST00000368690 TRABDQ9H4I3 376 aa18.47■□□□□ 0.55
CHTOP-203ENST00000368690 MYH11P35749 1972 aa18.46■□□□□ 0.55
CHTOP-203ENST00000368690 SLITRK3O94933 977 aa18.46■□□□□ 0.55
CHTOP-203ENST00000368690 CBX6O95503 412 aa18.46■□□□□ 0.55
CHTOP-203ENST00000368690 GCAP28676 217 aa18.46■□□□□ 0.55
CHTOP-203ENST00000368690 SHMT1P34896 483 aa18.46■□□□□ 0.55
CHTOP-203ENST00000368690 CDR2Q01850 454 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms