RNA–Protein interactions for RNA: ENST00000368687.1

CHTOP-202, Transcript of chromatin target of PRMT1, humanhuman

TSL 1 (best) BASIC

Gene CHTOP, Length 1,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-202ENST00000368687 C3orf58Q8NDZ4 430 aa20.06■□□□□ 0.8
CHTOP-202ENST00000368687 TMEM174Q8WUU8 243 aa20.06■□□□□ 0.8
CHTOP-202ENST00000368687 SAAL1Q96ER3 474 aa20.06■□□□□ 0.8
CHTOP-202ENST00000368687 SUSD3Q96L08 255 aa20.06■□□□□ 0.8
CHTOP-202ENST00000368687 NECTIN4Q96NY8 510 aa20.06■□□□□ 0.8
CHTOP-202ENST00000368687 OXCT2Q9BYC2 517 aaPredicted RBP20.06■□□□□ 0.8
CHTOP-202ENST00000368687 PLEKHA4Q9H4M7 779 aa20.06■□□□□ 0.8
CHTOP-202ENST00000368687 SFXN1Q9H9B4 322 aa20.06■□□□□ 0.8
CHTOP-202ENST00000368687 HSPBP1Q9NZL4 362 aa20.06■□□□□ 0.8
CHTOP-202ENST00000368687 BACE2Q9Y5Z0 518 aa20.06■□□□□ 0.8
CHTOP-202ENST00000368687 SPDYE4A6NLX3 237 aa20.05■□□□□ 0.8
CHTOP-202ENST00000368687 H7C4K7 107 aa20.05■□□□□ 0.8
CHTOP-202ENST00000368687 KINO60870 393 aaKnown RBP20.05■□□□□ 0.8
CHTOP-202ENST00000368687 SMC2O95347 1197 aa20.05■□□□□ 0.8
CHTOP-202ENST00000368687 NFICP08651 508 aa20.05■□□□□ 0.8
CHTOP-202ENST00000368687 HOXD13P35453 343 aa20.05■□□□□ 0.8
CHTOP-202ENST00000368687 PNPLA4P41247 253 aa20.05■□□□□ 0.8
CHTOP-202ENST00000368687 STK4Q13043 487 aa20.05■□□□□ 0.8
CHTOP-202ENST00000368687 SNW1Q13573 536 aaKnown RBP20.05■□□□□ 0.8
CHTOP-202ENST00000368687 CYP26C1Q6V0L0 522 aa20.05■□□□□ 0.8
CHTOP-202ENST00000368687 NELFCDQ8IXH7 590 aa20.05■□□□□ 0.8
CHTOP-202ENST00000368687 KIAA0895Q8NCT3 520 aa20.05■□□□□ 0.8
CHTOP-202ENST00000368687 ENGASEQ8NFI3 743 aa20.05■□□□□ 0.8
CHTOP-202ENST00000368687 FBXL18Q96ME1 805 aa20.05■□□□□ 0.8
CHTOP-202ENST00000368687 GSDMAQ96QA5 445 aa20.05■□□□□ 0.8
CHTOP-202ENST00000368687 IKZF4Q9H2S9 585 aa20.05■□□□□ 0.8
CHTOP-202ENST00000368687 TGFB1I1O43294 461 aa20.04■□□□□ 0.8
CHTOP-202ENST00000368687 PRPF40AO75400 957 aaKnown RBP20.04■□□□□ 0.8
CHTOP-202ENST00000368687 IL9P15248 144 aa20.04■□□□□ 0.8
CHTOP-202ENST00000368687 AARSP49588 968 aaKnown RBP eCLIP20.04■□□□□ 0.8
CHTOP-202ENST00000368687 SPAG1Q07617 926 aa20.04■□□□□ 0.8
CHTOP-202ENST00000368687 MYBPC2Q14324 1141 aa20.04■□□□□ 0.8
CHTOP-202ENST00000368687 CD300LGQ6UXG3 332 aa20.04■□□□□ 0.8
CHTOP-202ENST00000368687 RTL10Q7L3V2 364 aa20.04■□□□□ 0.8
CHTOP-202ENST00000368687 XXYLT1Q8NBI6 393 aa20.04■□□□□ 0.8
CHTOP-202ENST00000368687 LNX1Q8TBB1 728 aaPredicted RBP20.04■□□□□ 0.8
CHTOP-202ENST00000368687 ZNF560Q96MR9 790 aa20.04■□□□□ 0.8
CHTOP-202ENST00000368687 PCIF1Q9H4Z3 704 aa20.04■□□□□ 0.8
CHTOP-202ENST00000368687 MTRRQ9UBK8 725 aa20.04■□□□□ 0.8
CHTOP-202ENST00000368687 PCDHB8Q9UN66 801 aa20.04■□□□□ 0.8
CHTOP-202ENST00000368687 M0QZQ0 153 aa20.03■□□□□ 0.8
CHTOP-202ENST00000368687 PDXKO00764 312 aa20.03■□□□□ 0.8
CHTOP-202ENST00000368687 EPCAMP16422 314 aa20.03■□□□□ 0.8
CHTOP-202ENST00000368687 CLUL1Q15846 466 aa20.03■□□□□ 0.8
CHTOP-202ENST00000368687 SNRNP35Q16560 246 aaKnown RBP20.03■□□□□ 0.8
CHTOP-202ENST00000368687 C9orf57Q5W0N0 161 aa20.03■□□□□ 0.8
CHTOP-202ENST00000368687 C15orf39Q6ZRI6 1047 aa20.03■□□□□ 0.8
CHTOP-202ENST00000368687 SLC9A9Q8IVB4 645 aa20.03■□□□□ 0.8
CHTOP-202ENST00000368687 CMASQ8NFW8 434 aaPredicted RBP20.03■□□□□ 0.8
CHTOP-202ENST00000368687 NOC3LQ8WTT2 800 aaKnown RBP20.03■□□□□ 0.8
CHTOP-202ENST00000368687 B3GALT6Q96L58 329 aa20.03■□□□□ 0.8
CHTOP-202ENST00000368687 RIPOR3Q96MK2 946 aa20.03■□□□□ 0.8
CHTOP-202ENST00000368687 RHOBTB2Q9BYZ6 727 aa20.03■□□□□ 0.8
CHTOP-202ENST00000368687 ADAM7Q9H2U9 754 aa20.03■□□□□ 0.8
CHTOP-202ENST00000368687 DPP3Q9NY33 737 aa20.03■□□□□ 0.8
CHTOP-202ENST00000368687 ITGA11Q9UKX5 1188 aa20.03■□□□□ 0.8
CHTOP-202ENST00000368687 R3HCC1Q9Y3T6 440 aaKnown RBP20.03■□□□□ 0.8
CHTOP-202ENST00000368687 PLXNA3P51805 1871 aa20.03■□□□□ 0.8
CHTOP-202ENST00000368687 ANO9A1A5B4 782 aa20.02■□□□□ 0.8
CHTOP-202ENST00000368687 PIRO00625 290 aa20.02■□□□□ 0.8
CHTOP-202ENST00000368687 CALUO43852 315 aaPredicted RBP20.02■□□□□ 0.8
CHTOP-202ENST00000368687 PRR29P0C7W0 189 aa20.02■□□□□ 0.8
CHTOP-202ENST00000368687 TKTP29401 623 aaKnown RBP20.02■□□□□ 0.8
CHTOP-202ENST00000368687 MTHFRP42898 656 aa20.02■□□□□ 0.8
CHTOP-202ENST00000368687 BRCC3P46736 316 aa20.02■□□□□ 0.8
CHTOP-202ENST00000368687 UBE2HP62256 183 aa20.02■□□□□ 0.8
CHTOP-202ENST00000368687 RBM10P98175 930 aaKnown RBP20.02■□□□□ 0.8
CHTOP-202ENST00000368687 VARS2Q5ST30 1063 aaKnown RBP20.02■□□□□ 0.8
CHTOP-202ENST00000368687 ZNF280DQ6N043 979 aa20.02■□□□□ 0.8
CHTOP-202ENST00000368687 SYCE2Q6PIF2 218 aa20.02■□□□□ 0.8
CHTOP-202ENST00000368687 PRSS55Q6UWB4 352 aaPredicted RBP20.02■□□□□ 0.8
CHTOP-202ENST00000368687 ADHFE1Q8IWW8 467 aa20.02■□□□□ 0.8
CHTOP-202ENST00000368687 GUF1Q8N442 669 aaKnown RBP20.02■□□□□ 0.8
CHTOP-202ENST00000368687 SUSD6Q92537 303 aa20.02■□□□□ 0.8
CHTOP-202ENST00000368687 S1PR5Q9H228 398 aa20.02■□□□□ 0.8
CHTOP-202ENST00000368687 CD320Q9NPF0 282 aa20.02■□□□□ 0.8
CHTOP-202ENST00000368687 MAN1C1Q9NR34 630 aa20.02■□□□□ 0.8
CHTOP-202ENST00000368687 ZDHHC7Q9NXF8 308 aa20.02■□□□□ 0.8
CHTOP-202ENST00000368687 DSEQ9UL01 958 aa20.02■□□□□ 0.8
CHTOP-202ENST00000368687 USP15Q9Y4E8 981 aaPredicted RBP20.02■□□□□ 0.8
CHTOP-202ENST00000368687 C5orf42Q9H799 3197 aa20.01■□□□□ 0.79
CHTOP-202ENST00000368687 GOLGA8IPA6NC78 632 aa20.01■□□□□ 0.79
CHTOP-202ENST00000368687 GOLGA8JA6NMD2 632 aa20.01■□□□□ 0.79
CHTOP-202ENST00000368687 TMEM191BP0C7N4 346 aa20.01■□□□□ 0.79
CHTOP-202ENST00000368687 ODC1P11926 461 aa20.01■□□□□ 0.79
CHTOP-202ENST00000368687 TYMPP19971 482 aa20.01■□□□□ 0.79
CHTOP-202ENST00000368687 TAF6P49848 677 aa20.01■□□□□ 0.79
CHTOP-202ENST00000368687 LILRA4P59901 499 aa20.01■□□□□ 0.79
CHTOP-202ENST00000368687 TFAMQ00059 246 aaKnown RBP20.01■□□□□ 0.79
CHTOP-202ENST00000368687 RAB33AQ14088 237 aa20.01■□□□□ 0.79
CHTOP-202ENST00000368687 CBX2Q14781 532 aaPredicted RBP20.01■□□□□ 0.79
CHTOP-202ENST00000368687 SV2CQ496J9 727 aa20.01■□□□□ 0.79
CHTOP-202ENST00000368687 LIN9Q5TKA1 542 aa20.01■□□□□ 0.79
CHTOP-202ENST00000368687 SLC8B1Q6J4K2 584 aa20.01■□□□□ 0.79
CHTOP-202ENST00000368687 DSTYKQ6XUX3 929 aa20.01■□□□□ 0.79
CHTOP-202ENST00000368687 USP37Q86T82 979 aa20.01■□□□□ 0.79
CHTOP-202ENST00000368687 WDR49Q8IV35 697 aa20.01■□□□□ 0.79
CHTOP-202ENST00000368687 EFCAB13Q8IY85 973 aa20.01■□□□□ 0.79
CHTOP-202ENST00000368687 ANKRD36BP1Q96IX9 119 aa20.01■□□□□ 0.79
CHTOP-202ENST00000368687 FNBP1Q96RU3 617 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms