RNA–Protein interactions for RNA: ENST00000368530.6

TPM3-210, Transcript of tropomyosin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TPM3, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-210ENST00000368530 MAEAQ7L5Y9 396 aa10.84□□□□□ -0.67
TPM3-210ENST00000368530 SRGAP1Q7Z6B7 1085 aa10.84□□□□□ -0.67
TPM3-210ENST00000368530 FAM114A1Q8IWE2 563 aa10.84□□□□□ -0.67
TPM3-210ENST00000368530 MYCT1Q8N699 235 aa10.84□□□□□ -0.67
TPM3-210ENST00000368530 CPLX3Q8WVH0 158 aa10.84□□□□□ -0.67
TPM3-210ENST00000368530 SCFD1Q8WVM8 642 aa10.84□□□□□ -0.67
TPM3-210ENST00000368530 PGBD4Q96DM1 585 aa10.84□□□□□ -0.67
TPM3-210ENST00000368530 CCDC43Q96MW1 224 aaKnown RBP10.84□□□□□ -0.67
TPM3-210ENST00000368530 TMEM175Q9BSA9 504 aa10.84□□□□□ -0.67
TPM3-210ENST00000368530 SFXN1Q9H9B4 322 aa10.84□□□□□ -0.67
TPM3-210ENST00000368530 MRPL44Q9H9J2 332 aaKnown RBP10.84□□□□□ -0.67
TPM3-210ENST00000368530 RSAD1Q9HA92 442 aa10.84□□□□□ -0.67
TPM3-210ENST00000368530 KCNK12Q9HB15 430 aa10.84□□□□□ -0.67
TPM3-210ENST00000368530 RYDENQ9NUL5 291 aaKnown RBP10.84□□□□□ -0.67
TPM3-210ENST00000368530 MIOSQ9NXC5 875 aa10.84□□□□□ -0.67
TPM3-210ENST00000368530 PPP1R37O75864 691 aa10.84□□□□□ -0.67
TPM3-210ENST00000368530 PRPF6O94906 941 aaKnown RBP10.84□□□□□ -0.67
TPM3-210ENST00000368530 AOC1P19801 751 aa10.84□□□□□ -0.67
TPM3-210ENST00000368530 KLRC2P26717 231 aa10.84□□□□□ -0.67
TPM3-210ENST00000368530 UBXN1Q04323 297 aa10.84□□□□□ -0.67
TPM3-210ENST00000368530 DSC1Q08554 894 aa10.84□□□□□ -0.67
TPM3-210ENST00000368530 LAMTOR4Q0VGL1 99 aa10.84□□□□□ -0.67
TPM3-210ENST00000368530 TBX2Q13207 712 aaPredicted RBP10.84□□□□□ -0.67
TPM3-210ENST00000368530 TDGQ13569 410 aa10.84□□□□□ -0.67
TPM3-210ENST00000368530 KIAA0319Q5VV43 1072 aa10.84□□□□□ -0.67
TPM3-210ENST00000368530 PADI6Q6TGC4 694 aa10.84□□□□□ -0.67
TPM3-210ENST00000368530 OTOP3Q7RTS5 596 aa10.84□□□□□ -0.67
TPM3-210ENST00000368530 C4orf19Q8IY42 314 aa10.84□□□□□ -0.67
TPM3-210ENST00000368530 COLGALT2Q8IYK4 626 aa10.84□□□□□ -0.67
TPM3-210ENST00000368530 KCTD17Q8N5Z5 321 aa10.84□□□□□ -0.67
TPM3-210ENST00000368530 CMASQ8NFW8 434 aaPredicted RBP10.84□□□□□ -0.67
TPM3-210ENST00000368530 KIAA1524Q8TCG1 905 aa10.84□□□□□ -0.67
TPM3-210ENST00000368530 TMEM143Q96AN5 459 aa10.84□□□□□ -0.67
TPM3-210ENST00000368530 JPH2Q9BR39 696 aaPredicted RBP10.84□□□□□ -0.67
TPM3-210ENST00000368530 EMILIN2Q9BXX0 1053 aa10.84□□□□□ -0.67
TPM3-210ENST00000368530 RHOBTB2Q9BYZ6 727 aa10.84□□□□□ -0.67
TPM3-210ENST00000368530 RXFP1Q9HBX9 757 aa10.84□□□□□ -0.67
TPM3-210ENST00000368530 KANSL3Q9P2N6 904 aa10.84□□□□□ -0.67
TPM3-210ENST00000368530 DUSP12Q9UNI6 340 aa10.84□□□□□ -0.67
TPM3-210ENST00000368530 FAN1Q9Y2M0 1017 aa10.84□□□□□ -0.67
TPM3-210ENST00000368530 DCHS1Q96JQ0 3298 aa10.83□□□□□ -0.68
TPM3-210ENST00000368530 WDR87Q6ZQQ6 2873 aa10.83□□□□□ -0.68
TPM3-210ENST00000368530 CNTNAP2Q9UHC6 1331 aa10.83□□□□□ -0.68
TPM3-210ENST00000368530 F8W810 466 aa10.83□□□□□ -0.68
TPM3-210ENST00000368530 NARSO43776 548 aaKnown RBP10.83□□□□□ -0.68
TPM3-210ENST00000368530 USO1O60763 962 aaKnown RBP10.83□□□□□ -0.68
TPM3-210ENST00000368530 HIP1RO75146 1068 aa10.83□□□□□ -0.68
TPM3-210ENST00000368530 GCNT3O95395 438 aa10.83□□□□□ -0.68
TPM3-210ENST00000368530 POMCP01189 267 aa10.83□□□□□ -0.68
TPM3-210ENST00000368530 SOD2P04179 222 aa10.83□□□□□ -0.68
TPM3-210ENST00000368530 TPM2P07951 284 aa10.83□□□□□ -0.68
TPM3-210ENST00000368530 SRGAP2CP0DJJ0 459 aa10.83□□□□□ -0.68
TPM3-210ENST00000368530 GAP43P17677 238 aa10.83□□□□□ -0.68
TPM3-210ENST00000368530 NMT1P30419 496 aaKnown RBP10.83□□□□□ -0.68
TPM3-210ENST00000368530 YWHABP31946 246 aaKnown RBP10.83□□□□□ -0.68
TPM3-210ENST00000368530 PBX1P40424 430 aa10.83□□□□□ -0.68
TPM3-210ENST00000368530 ADKP55263 362 aaKnown RBP10.83□□□□□ -0.68
TPM3-210ENST00000368530 LRRC63Q05C16 580 aa10.83□□□□□ -0.68
TPM3-210ENST00000368530 NOLC1Q14978 699 aaKnown RBP eCLIP10.83□□□□□ -0.68
TPM3-210ENST00000368530 CEP135Q66GS9 1140 aa10.83□□□□□ -0.68
TPM3-210ENST00000368530 CCDC149Q6ZUS6 474 aa10.83□□□□□ -0.68
TPM3-210ENST00000368530 FRMD5Q7Z6J6 570 aa10.83□□□□□ -0.68
TPM3-210ENST00000368530 GSTCDQ8NEC7 633 aa10.83□□□□□ -0.68
TPM3-210ENST00000368530 ACSF2Q96CM8 615 aaPredicted RBP10.83□□□□□ -0.68
TPM3-210ENST00000368530 CEP170P1Q96L14 293 aa10.83□□□□□ -0.68
TPM3-210ENST00000368530 RPS6KC1Q96S38 1066 aa10.83□□□□□ -0.68
TPM3-210ENST00000368530 TUBGCP2Q9BSJ2 902 aa10.83□□□□□ -0.68
TPM3-210ENST00000368530 XPNPEP1Q9NQW7 623 aa10.83□□□□□ -0.68
TPM3-210ENST00000368530 MRPL17Q9NRX2 175 aaKnown RBP10.83□□□□□ -0.68
TPM3-210ENST00000368530 CHST7Q9NS84 486 aa10.83□□□□□ -0.68
TPM3-210ENST00000368530 STK39Q9UEW8 545 aa10.83□□□□□ -0.68
TPM3-210ENST00000368530 PPME1Q9Y570 386 aa10.83□□□□□ -0.68
TPM3-210ENST00000368530 KRBA1A5PL33 1030 aa10.82□□□□□ -0.68
TPM3-210ENST00000368530 LRRC10BA6NIK2 292 aa10.82□□□□□ -0.68
TPM3-210ENST00000368530 LGALS16A8MUM7 142 aa10.82□□□□□ -0.68
TPM3-210ENST00000368530 TEX28O15482 410 aa10.82□□□□□ -0.68
TPM3-210ENST00000368530 KIF20AO95235 890 aa10.82□□□□□ -0.68
TPM3-210ENST00000368530 FGFR1OPO95684 399 aaKnown RBP10.82□□□□□ -0.68
TPM3-210ENST00000368530 RFC5P40937 340 aa10.82□□□□□ -0.68
TPM3-210ENST00000368530 RARRES1P49788 294 aa10.82□□□□□ -0.68
TPM3-210ENST00000368530 AMHR2Q16671 573 aa10.82□□□□□ -0.68
TPM3-210ENST00000368530 XKR9Q5GH70 373 aa10.82□□□□□ -0.68
TPM3-210ENST00000368530 CCDC105Q8IYK2 499 aa10.82□□□□□ -0.68
TPM3-210ENST00000368530 FLCNQ8NFG4 579 aa10.82□□□□□ -0.68
TPM3-210ENST00000368530 URGCPQ8TCY9 931 aa10.82□□□□□ -0.68
TPM3-210ENST00000368530 PSPC1Q8WXF1 523 aaKnown RBP10.82□□□□□ -0.68
TPM3-210ENST00000368530 RSAD2Q8WXG1 361 aa10.82□□□□□ -0.68
TPM3-210ENST00000368530 SLC7A3Q8WY07 619 aa10.82□□□□□ -0.68
TPM3-210ENST00000368530 ZNF707Q96C28 371 aaPredicted RBP10.82□□□□□ -0.68
TPM3-210ENST00000368530 HERC2P3Q9BVR0 1158 aa10.82□□□□□ -0.68
TPM3-210ENST00000368530 EIF2AQ9BY44 585 aaKnown RBP10.82□□□□□ -0.68
TPM3-210ENST00000368530 PARVGQ9HBI0 331 aa10.82□□□□□ -0.68
TPM3-210ENST00000368530 WDR6Q9NNW5 1121 aaKnown RBP10.82□□□□□ -0.68
TPM3-210ENST00000368530 IGSF9Q9P2J2 1179 aa10.82□□□□□ -0.68
TPM3-210ENST00000368530 IPPQ9Y573 584 aa10.82□□□□□ -0.68
TPM3-210ENST00000368530 GVINP1Q7Z2Y8 2422 aa10.82□□□□□ -0.68
TPM3-210ENST00000368530 FAM186AA6NE01 2351 aa10.81□□□□□ -0.68
TPM3-210ENST00000368530 CCDC195A0A1B0GUA6 201 aa10.81□□□□□ -0.68
TPM3-210ENST00000368530 ARL5CA6NH57 179 aa10.81□□□□□ -0.68
TPM3-210ENST00000368530 C2CD2LO14523 706 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms