RNA–Protein interactions for RNA: ENST00000368311.5

SSR2-202, Transcript of signal sequence receptor subunit 2, humanhuman

TSL 1 (best)

Gene SSR2, Length 5,166 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR2-202ENST00000368311 TLE2Q04725 743 aa8.79□□□□□ -1
SSR2-202ENST00000368311 SULT2A1Q06520 285 aa8.79□□□□□ -1
SSR2-202ENST00000368311 TROAPQ12815 778 aa8.79□□□□□ -1
SSR2-202ENST00000368311 LRMPQ12912 555 aa8.79□□□□□ -1
SSR2-202ENST00000368311 CUL4AQ13619 759 aa8.79□□□□□ -1
SSR2-202ENST00000368311 CDH18Q13634 790 aa8.79□□□□□ -1
SSR2-202ENST00000368311 SMARCD1Q96GM5 515 aa8.79□□□□□ -1
SSR2-202ENST00000368311 HPDLQ96IR7 371 aa8.79□□□□□ -1
SSR2-202ENST00000368311 NIFKQ9BYG3 293 aaKnown RBP8.79□□□□□ -1
SSR2-202ENST00000368311 ZNF518BQ9C0D4 1074 aa8.79□□□□□ -1
SSR2-202ENST00000368311 TNFSF13BQ9Y275 285 aa8.79□□□□□ -1
SSR2-202ENST00000368311 SNX9Q9Y5X1 595 aa8.79□□□□□ -1
SSR2-202ENST00000368311 ARHGAP42A6NI28 874 aa8.79□□□□□ -1
SSR2-202ENST00000368311 GMNNO75496 209 aa8.79□□□□□ -1
SSR2-202ENST00000368311 APODP05090 189 aa8.79□□□□□ -1
SSR2-202ENST00000368311 CHKAP35790 457 aa8.79□□□□□ -1
SSR2-202ENST00000368311 PAPOLAP51003 745 aaKnown RBP8.79□□□□□ -1
SSR2-202ENST00000368311 CCL23P55773 120 aa8.79□□□□□ -1
SSR2-202ENST00000368311 OR8K1Q8NGG5 319 aa8.79□□□□□ -1
SSR2-202ENST00000368311 SPPL2BQ8TCT7 592 aa8.79□□□□□ -1
SSR2-202ENST00000368311 CYP3A7-CYP3A51PA0A087WV96 503 aa8.79□□□□□ -1
SSR2-202ENST00000368311 CSPG5O95196 566 aa8.79□□□□□ -1
SSR2-202ENST00000368311 CYP3A7P24462 503 aa8.79□□□□□ -1
SSR2-202ENST00000368311 U2AF2P26368 475 aaKnown RBP eCLIP8.79□□□□□ -1
SSR2-202ENST00000368311 CDC27P30260 824 aa8.79□□□□□ -1
SSR2-202ENST00000368311 DNA2P51530 1060 aa8.79□□□□□ -1
SSR2-202ENST00000368311 BCAT1P54687 386 aa8.79□□□□□ -1
SSR2-202ENST00000368311 HLTFQ14527 1009 aaKnown RBP eCLIP8.79□□□□□ -1
SSR2-202ENST00000368311 FAM171A1Q5VUB5 890 aa8.79□□□□□ -1
SSR2-202ENST00000368311 MOB2Q70IA6 237 aa8.79□□□□□ -1
SSR2-202ENST00000368311 PEX26Q7Z412 305 aa8.79□□□□□ -1
SSR2-202ENST00000368311 UNC93AQ86WB7 457 aa8.79□□□□□ -1
SSR2-202ENST00000368311 DCUN1D1Q96GG9 259 aa8.79□□□□□ -1
SSR2-202ENST00000368311 PAWRQ96IZ0 340 aaKnown RBP8.79□□□□□ -1
SSR2-202ENST00000368311 CFAP57Q96MR6 1250 aa8.79□□□□□ -1
SSR2-202ENST00000368311 MTMR6Q9Y217 621 aa8.79□□□□□ -1
SSR2-202ENST00000368311 NFE2L3Q9Y4A8 694 aa8.79□□□□□ -1
SSR2-202ENST00000368311 A0A1W2PQ45 241 aaPredicted RBP8.79□□□□□ -1
SSR2-202ENST00000368311 A0A1W2PQY0 241 aa8.79□□□□□ -1
SSR2-202ENST00000368311 C1QTNF3-AMACRE9PGA6 284 aa8.79□□□□□ -1
SSR2-202ENST00000368311 ZNF263O14978 683 aa8.79□□□□□ -1
SSR2-202ENST00000368311 HMGB3O15347 200 aaKnown RBP8.79□□□□□ -1
SSR2-202ENST00000368311 VDRP11473 427 aa8.79□□□□□ -1
SSR2-202ENST00000368311 GNSP15586 552 aa8.79□□□□□ -1
SSR2-202ENST00000368311 USP4Q13107 963 aa8.79□□□□□ -1
SSR2-202ENST00000368311 PSMD5Q16401 504 aa8.79□□□□□ -1
SSR2-202ENST00000368311 FBXO47Q5MNV8 452 aa8.79□□□□□ -1
SSR2-202ENST00000368311 ARHGEF18Q6ZSZ5 1173 aa8.79□□□□□ -1
SSR2-202ENST00000368311 CENPKQ9BS16 269 aa8.79□□□□□ -1
SSR2-202ENST00000368311 PCDHA7Q9UN72 937 aa8.79□□□□□ -1
SSR2-202ENST00000368311 UTP11Q9Y3A2 253 aaKnown RBP8.79□□□□□ -1
SSR2-202ENST00000368311 PODXLO00592 558 aa8.78□□□□□ -1
SSR2-202ENST00000368311 MAPK13O15264 365 aa8.78□□□□□ -1
SSR2-202ENST00000368311 HSPA8P11142 646 aaKnown RBP8.78□□□□□ -1
SSR2-202ENST00000368311 PTPN2P17706 415 aa8.78□□□□□ -1
SSR2-202ENST00000368311 C21orf59P57076 290 aa8.78□□□□□ -1
SSR2-202ENST00000368311 ENPEPQ07075 957 aa8.78□□□□□ -1
SSR2-202ENST00000368311 KIZQ2M2Z5 673 aa8.78□□□□□ -1
SSR2-202ENST00000368311 C10orf120Q5SQS8 335 aa8.78□□□□□ -1
SSR2-202ENST00000368311 ERAP2Q6P179 960 aa8.78□□□□□ -1
SSR2-202ENST00000368311 KIRREL3Q8IZU9 778 aa8.78□□□□□ -1
SSR2-202ENST00000368311 KCTD6Q8NC69 237 aa8.78□□□□□ -1
SSR2-202ENST00000368311 C18orf25Q96B23 403 aaPredicted RBP8.78□□□□□ -1
SSR2-202ENST00000368311 ARHGEF26Q96DR7 871 aa8.78□□□□□ -1
SSR2-202ENST00000368311 NELL2Q99435 816 aa8.78□□□□□ -1
SSR2-202ENST00000368311 CACNA1FO60840 1977 aa8.78□□□□□ -1
SSR2-202ENST00000368311 POTEFA5A3E0 1075 aa8.78□□□□□ -1
SSR2-202ENST00000368311 POTEMA6NI47 508 aa8.78□□□□□ -1
SSR2-202ENST00000368311 POTEIP0CG38 1075 aa8.78□□□□□ -1
SSR2-202ENST00000368311 NCOA4Q13772 614 aa8.78□□□□□ -1
SSR2-202ENST00000368311 RPS6KA1Q15418 735 aa8.78□□□□□ -1
SSR2-202ENST00000368311 POTEGQ6S5H5 508 aa8.78□□□□□ -1
SSR2-202ENST00000368311 POTEEQ6S8J3 1075 aa8.78□□□□□ -1
SSR2-202ENST00000368311 LRRC71Q8N4P6 559 aa8.78□□□□□ -1
SSR2-202ENST00000368311 TRIM58Q8NG06 486 aa8.78□□□□□ -1
SSR2-202ENST00000368311 PAGE5Q96GU1 130 aa8.78□□□□□ -1
SSR2-202ENST00000368311 USP28Q96RU2 1077 aa8.78□□□□□ -1
SSR2-202ENST00000368311 OSMRQ99650 979 aa8.78□□□□□ -1
SSR2-202ENST00000368311 TTPALQ9BTX7 342 aa8.78□□□□□ -1
SSR2-202ENST00000368311 TRIM54Q9BYV2 358 aa8.78□□□□□ -1
SSR2-202ENST00000368311 UBXN6Q9BZV1 441 aa8.78□□□□□ -1
SSR2-202ENST00000368311 TRIM45Q9H8W5 580 aaPredicted RBP8.78□□□□□ -1
SSR2-202ENST00000368311 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.78□□□□□ -1
SSR2-202ENST00000368311 BARX2Q9UMQ3 279 aaPredicted RBP8.78□□□□□ -1
SSR2-202ENST00000368311 ERBB2P04626 1255 aa8.78□□□□□ -1
SSR2-202ENST00000368311 CYP2C18P33260 490 aa8.78□□□□□ -1
SSR2-202ENST00000368311 LONRF3Q496Y0 759 aa8.78□□□□□ -1
SSR2-202ENST00000368311 RWDD4Q6NW29 188 aaKnown RBP8.78□□□□□ -1
SSR2-202ENST00000368311 MAMDC4Q6UXC1 1216 aa8.78□□□□□ -1
SSR2-202ENST00000368311 SLC39A5Q6ZMH5 540 aa8.78□□□□□ -1
SSR2-202ENST00000368311 RRAGAQ7L523 313 aa8.78□□□□□ -1
SSR2-202ENST00000368311 NSRP1Q9H0G5 558 aaKnown RBP8.78□□□□□ -1
SSR2-202ENST00000368311 CDH9Q9ULB4 789 aa8.78□□□□□ -1
SSR2-202ENST00000368311 STRCP1A6NGW2 1772 aa8.78□□□□□ -1
SSR2-202ENST00000368311 A0A1W2PQ67 120 aa8.78□□□□□ -1
SSR2-202ENST00000368311 A0A1W2PRG0 241 aa8.78□□□□□ -1
SSR2-202ENST00000368311 GOLGA8JA6NMD2 632 aa8.78□□□□□ -1
SSR2-202ENST00000368311 E9PMD0 336 aa8.78□□□□□ -1
SSR2-202ENST00000368311 TIMP1P01033 207 aa8.78□□□□□ -1
SSR2-202ENST00000368311 SERPING1P05155 500 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms