RNA–Protein interactions for RNA: ENST00000368210.7

PTPRK-204, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRK, Length 5,025 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-204ENST00000368210 NDE1Q9NXR1 346 aa13.98□□□□□ -0.17
PTPRK-204ENST00000368210 E7ENQ6 273 aa13.97□□□□□ -0.17
PTPRK-204ENST00000368210 NVLO15381 856 aaKnown RBP13.97□□□□□ -0.17
PTPRK-204ENST00000368210 FAM107AO95990 144 aa13.97□□□□□ -0.17
PTPRK-204ENST00000368210 ARP10275 920 aa13.97□□□□□ -0.17
PTPRK-204ENST00000368210 COMTP21964 271 aa13.97□□□□□ -0.17
PTPRK-204ENST00000368210 ADORA2BP29275 332 aa13.97□□□□□ -0.17
PTPRK-204ENST00000368210 LSP1P33241 339 aa13.97□□□□□ -0.17
PTPRK-204ENST00000368210 AP2B1P63010 937 aa13.97□□□□□ -0.17
PTPRK-204ENST00000368210 HEATR6Q6AI08 1181 aaKnown RBP13.97□□□□□ -0.17
PTPRK-204ENST00000368210 PPM1NQ8N819 430 aa13.97□□□□□ -0.17
PTPRK-204ENST00000368210 USP38Q8NB14 1042 aa13.97□□□□□ -0.17
PTPRK-204ENST00000368210 ATP11CQ8NB49 1132 aa13.97□□□□□ -0.17
PTPRK-204ENST00000368210 CHST13Q8NET6 341 aa13.97□□□□□ -0.17
PTPRK-204ENST00000368210 FAM163AQ96GL9 167 aaPredicted RBP13.97□□□□□ -0.17
PTPRK-204ENST00000368210 C17orf75Q9HAS0 396 aa13.97□□□□□ -0.17
PTPRK-204ENST00000368210 NDUFA13Q9P0J0 144 aa13.97□□□□□ -0.17
PTPRK-204ENST00000368210 EPS15L1Q9UBC2 864 aa13.97□□□□□ -0.17
PTPRK-204ENST00000368210 CHMP2BQ9UQN3 213 aa13.97□□□□□ -0.17
PTPRK-204ENST00000368210 RAD51CO43502 376 aa13.97□□□□□ -0.17
PTPRK-204ENST00000368210 SLC4A1P02730 911 aa13.97□□□□□ -0.17
PTPRK-204ENST00000368210 FGFR4P22455 802 aa13.97□□□□□ -0.17
PTPRK-204ENST00000368210 ROR1Q01973 937 aa13.97□□□□□ -0.17
PTPRK-204ENST00000368210 MMGT1Q8N4V1 131 aa13.97□□□□□ -0.17
PTPRK-204ENST00000368210 TARS2Q9BW92 718 aaKnown RBP13.97□□□□□ -0.17
PTPRK-204ENST00000368210 HACL1Q9UJ83 578 aa13.97□□□□□ -0.17
PTPRK-204ENST00000368210 A0A0G2JND7 137 aa13.97□□□□□ -0.17
PTPRK-204ENST00000368210 ANP32DO95626 131 aa13.97□□□□□ -0.17
PTPRK-204ENST00000368210 CCDC159P0C7I6 412 aa13.97□□□□□ -0.17
PTPRK-204ENST00000368210 PON1P27169 355 aa13.97□□□□□ -0.17
PTPRK-204ENST00000368210 PDZD8Q8NEN9 1154 aa13.97□□□□□ -0.17
PTPRK-204ENST00000368210 ZNF560Q96MR9 790 aa13.97□□□□□ -0.17
PTPRK-204ENST00000368210 KIFC3Q9BVG8 833 aa13.97□□□□□ -0.17
PTPRK-204ENST00000368210 TMEM117Q9H0C3 514 aa13.97□□□□□ -0.17
PTPRK-204ENST00000368210 LZTS1Q9Y250 596 aa13.97□□□□□ -0.17
PTPRK-204ENST00000368210 DUSP10Q9Y6W6 482 aa13.97□□□□□ -0.17
PTPRK-204ENST00000368210 WTIPA6NIX2 430 aaPredicted RBP13.97□□□□□ -0.17
PTPRK-204ENST00000368210 AHCYL1O43865 530 aa13.97□□□□□ -0.17
PTPRK-204ENST00000368210 MUTP22033 750 aa13.97□□□□□ -0.17
PTPRK-204ENST00000368210 Q4G0T1 1027 aa13.97□□□□□ -0.17
PTPRK-204ENST00000368210 SENP7Q9BQF6 1050 aa13.97□□□□□ -0.17
PTPRK-204ENST00000368210 WDR35Q9P2L0 1181 aa13.97□□□□□ -0.17
PTPRK-204ENST00000368210 TBX20Q9UMR3 447 aa13.97□□□□□ -0.17
PTPRK-204ENST00000368210 FAM200BP0CF97 657 aa13.96□□□□□ -0.17
PTPRK-204ENST00000368210 YY1P25490 414 aa13.96□□□□□ -0.17
PTPRK-204ENST00000368210 CARSP49589 748 aaKnown RBP13.96□□□□□ -0.17
PTPRK-204ENST00000368210 CASP4P49662 377 aa13.96□□□□□ -0.17
PTPRK-204ENST00000368210 STX1BP61266 288 aa13.96□□□□□ -0.17
PTPRK-204ENST00000368210 BYSLQ13895 437 aaKnown RBP13.96□□□□□ -0.17
PTPRK-204ENST00000368210 ANO5Q75V66 913 aa13.96□□□□□ -0.17
PTPRK-204ENST00000368210 SH2D3CQ8N5H7 860 aa13.96□□□□□ -0.17
PTPRK-204ENST00000368210 FAM81AQ8TBF8 368 aa13.96□□□□□ -0.17
PTPRK-204ENST00000368210 SCFD1Q8WVM8 642 aa13.96□□□□□ -0.17
PTPRK-204ENST00000368210 RIN2Q8WYP3 895 aaPredicted RBP13.96□□□□□ -0.17
PTPRK-204ENST00000368210 TRIM56Q9BRZ2 755 aaKnown RBP13.96□□□□□ -0.17
PTPRK-204ENST00000368210 EFHD1Q9BUP0 239 aa13.96□□□□□ -0.17
PTPRK-204ENST00000368210 LACRTQ9GZZ8 138 aa13.96□□□□□ -0.17
PTPRK-204ENST00000368210 KLHL11Q9NVR0 708 aa13.96□□□□□ -0.17
PTPRK-204ENST00000368210 RBP5P82980 135 aa13.96□□□□□ -0.17
PTPRK-204ENST00000368210 SYDE1Q6ZW31 735 aaPredicted RBP13.96□□□□□ -0.17
PTPRK-204ENST00000368210 CRLF3Q8IUI8 442 aa13.96□□□□□ -0.17
PTPRK-204ENST00000368210 SCN4BQ8IWT1 228 aa13.96□□□□□ -0.17
PTPRK-204ENST00000368210 RCOR2Q8IZ40 523 aa13.96□□□□□ -0.17
PTPRK-204ENST00000368210 SKA2Q8WVK7 121 aaPredicted RBP13.96□□□□□ -0.17
PTPRK-204ENST00000368210 LRGUKQ96M69 825 aa13.96□□□□□ -0.17
PTPRK-204ENST00000368210 FNDC3AQ9Y2H6 1198 aaKnown RBP13.96□□□□□ -0.17
PTPRK-204ENST00000368210 MAGEB2O15479 319 aa13.96□□□□□ -0.18
PTPRK-204ENST00000368210 EXTL3O43909 919 aa13.96□□□□□ -0.18
PTPRK-204ENST00000368210 ADCY3O60266 1144 aa13.96□□□□□ -0.18
PTPRK-204ENST00000368210 CDK17Q00537 523 aa13.96□□□□□ -0.18
PTPRK-204ENST00000368210 TSPY1Q01534 308 aa13.96□□□□□ -0.18
PTPRK-204ENST00000368210 PREPLQ4J6C6 727 aaPredicted RBP13.96□□□□□ -0.18
PTPRK-204ENST00000368210 OLFML1Q6UWY5 402 aa13.96□□□□□ -0.18
PTPRK-204ENST00000368210 TRAPPC11Q7Z392 1133 aa13.96□□□□□ -0.18
PTPRK-204ENST00000368210 VPS39Q96JC1 886 aa13.96□□□□□ -0.18
PTPRK-204ENST00000368210 LRRC37BQ96QE4 947 aa13.96□□□□□ -0.18
PTPRK-204ENST00000368210 SIKE1Q9BRV8 207 aa13.96□□□□□ -0.18
PTPRK-204ENST00000368210 PI4K2AQ9BTU6 479 aa13.96□□□□□ -0.18
PTPRK-204ENST00000368210 SLC25A27O95847 323 aa13.96□□□□□ -0.18
PTPRK-204ENST00000368210 PMS1P54277 932 aaKnown RBP13.96□□□□□ -0.18
PTPRK-204ENST00000368210 ACTR2P61160 394 aa13.96□□□□□ -0.18
PTPRK-204ENST00000368210 CDR2Q01850 454 aa13.96□□□□□ -0.18
PTPRK-204ENST00000368210 R3HDM1Q15032 1099 aaKnown RBP13.96□□□□□ -0.18
PTPRK-204ENST00000368210 LRRC14Q15048 493 aa13.96□□□□□ -0.18
PTPRK-204ENST00000368210 C3orf20Q8ND61 904 aa13.96□□□□□ -0.18
PTPRK-204ENST00000368210 CLMNQ96JQ2 1002 aa13.96□□□□□ -0.18
PTPRK-204ENST00000368210 TRAIPQ9BWF2 469 aa13.96□□□□□ -0.18
PTPRK-204ENST00000368210 HPCAL4Q9UM19 191 aa13.96□□□□□ -0.18
PTPRK-204ENST00000368210 SNX9Q9Y5X1 595 aa13.96□□□□□ -0.18
PTPRK-204ENST00000368210 A0A087X0B3 334 aa13.95□□□□□ -0.18
PTPRK-204ENST00000368210 MRPS15P82914 257 aaKnown RBP13.95□□□□□ -0.18
PTPRK-204ENST00000368210 EZH2Q15910 746 aaKnown RBP13.95□□□□□ -0.18
PTPRK-204ENST00000368210 JADE1Q6IE81 842 aa13.95□□□□□ -0.18
PTPRK-204ENST00000368210 NANOGNBQ7Z5D8 188 aa13.95□□□□□ -0.18
PTPRK-204ENST00000368210 CARD9Q9H257 536 aa13.95□□□□□ -0.18
PTPRK-204ENST00000368210 TUBA8Q9NY65 449 aaPredicted RBP13.95□□□□□ -0.18
PTPRK-204ENST00000368210 FOXP2O15409 715 aa13.95□□□□□ -0.18
PTPRK-204ENST00000368210 ATMINO43313 823 aaPredicted RBP13.95□□□□□ -0.18
PTPRK-204ENST00000368210 CYTH3O43739 400 aa13.95□□□□□ -0.18
PTPRK-204ENST00000368210 EFHC2Q5JST6 749 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms