RNA–Protein interactions for RNA: ENST00000367621.1

VTA1-201, Transcript of vesicle trafficking 1, humanhuman

TSL 5 BASIC

Gene VTA1, Length 1,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-201ENST00000367621 CACNA2D4Q7Z3S7 1137 aa10.24□□□□□ -0.77
VTA1-201ENST00000367621 REXO1L1PQ8IX06 675 aa10.24□□□□□ -0.77
VTA1-201ENST00000367621 ATRIPQ8WXE1 791 aa10.24□□□□□ -0.77
VTA1-201ENST00000367621 ACAP3Q96P50 834 aa10.24□□□□□ -0.77
VTA1-201ENST00000367621 DESI2Q9BSY9 194 aa10.24□□□□□ -0.77
VTA1-201ENST00000367621 SYT11Q9BT88 431 aa10.24□□□□□ -0.77
VTA1-201ENST00000367621 PI4K2AQ9BTU6 479 aa10.24□□□□□ -0.77
VTA1-201ENST00000367621 MTMR12Q9C0I1 747 aa10.24□□□□□ -0.77
VTA1-201ENST00000367621 NUCKS1Q9H1E3 243 aaKnown RBP10.24□□□□□ -0.77
VTA1-201ENST00000367621 NHEJ1Q9H9Q4 299 aaPredicted RBP10.24□□□□□ -0.77
VTA1-201ENST00000367621 UBE2TQ9NPD8 197 aaPredicted RBP10.24□□□□□ -0.77
VTA1-201ENST00000367621 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.24□□□□□ -0.77
VTA1-201ENST00000367621 SNTG2Q9NY99 539 aa10.24□□□□□ -0.77
VTA1-201ENST00000367621 SIX4Q9UIU6 781 aa10.24□□□□□ -0.77
VTA1-201ENST00000367621 PIN4Q9Y237 131 aaKnown RBP10.24□□□□□ -0.77
VTA1-201ENST00000367621 HES2Q9Y543 173 aa10.24□□□□□ -0.77
VTA1-201ENST00000367621 EPN1Q9Y6I3 576 aaPredicted RBP10.24□□□□□ -0.77
VTA1-201ENST00000367621 FOXN3O00409 490 aaPredicted RBP10.23□□□□□ -0.77
VTA1-201ENST00000367621 ZC3H11AO75152 810 aaKnown RBP eCLIP10.23□□□□□ -0.77
VTA1-201ENST00000367621 CAND2O75155 1236 aa10.23□□□□□ -0.77
VTA1-201ENST00000367621 RPS6KA5O75582 802 aa10.23□□□□□ -0.77
VTA1-201ENST00000367621 CKBP12277 381 aa10.23□□□□□ -0.77
VTA1-201ENST00000367621 RFX1P22670 979 aa10.23□□□□□ -0.77
VTA1-201ENST00000367621 MSNP26038 577 aaKnown RBP10.23□□□□□ -0.77
VTA1-201ENST00000367621 CD52P31358 61 aa10.23□□□□□ -0.77
VTA1-201ENST00000367621 SOX5P35711 763 aa10.23□□□□□ -0.77
VTA1-201ENST00000367621 EIF4A3P38919 411 aaKnown RBP10.23□□□□□ -0.77
VTA1-201ENST00000367621 PRKCIP41743 596 aa10.23□□□□□ -0.77
VTA1-201ENST00000367621 LBX1P52954 281 aa10.23□□□□□ -0.77
VTA1-201ENST00000367621 NCBP1Q09161 790 aaKnown RBP10.23□□□□□ -0.77
VTA1-201ENST00000367621 CETN1Q12798 172 aa10.23□□□□□ -0.77
VTA1-201ENST00000367621 RAPGEF1Q13905 1077 aa10.23□□□□□ -0.77
VTA1-201ENST00000367621 GPNMBQ14956 572 aa10.23□□□□□ -0.77
VTA1-201ENST00000367621 ZBTB6Q15916 424 aa10.23□□□□□ -0.77
VTA1-201ENST00000367621 DUOXA2Q1HG44 320 aa10.23□□□□□ -0.77
VTA1-201ENST00000367621 JADE1Q6IE81 842 aa10.23□□□□□ -0.77
VTA1-201ENST00000367621 SPOPLQ6IQ16 392 aa10.23□□□□□ -0.77
VTA1-201ENST00000367621 FBXO46Q6PJ61 603 aaPredicted RBP10.23□□□□□ -0.77
VTA1-201ENST00000367621 FAM126BQ8IXS8 530 aa10.23□□□□□ -0.77
VTA1-201ENST00000367621 UBR7Q8N806 425 aa10.23□□□□□ -0.77
VTA1-201ENST00000367621 C1orf127Q8N9H9 656 aa10.23□□□□□ -0.77
VTA1-201ENST00000367621 ACRBPQ8NEB7 543 aa10.23□□□□□ -0.77
VTA1-201ENST00000367621 SNX27Q96L92 541 aa10.23□□□□□ -0.77
VTA1-201ENST00000367621 ZMAT2Q96NC0 199 aaKnown RBP10.23□□□□□ -0.77
VTA1-201ENST00000367621 ADPGKQ9BRR6 497 aa10.23□□□□□ -0.77
VTA1-201ENST00000367621 SEZ6LQ9BYH1 1024 aa10.23□□□□□ -0.77
VTA1-201ENST00000367621 XYLT2Q9H1B5 865 aa10.23□□□□□ -0.77
VTA1-201ENST00000367621 NXF3Q9H4D5 531 aaKnown RBP10.23□□□□□ -0.77
VTA1-201ENST00000367621 ASB7Q9H672 318 aa10.23□□□□□ -0.77
VTA1-201ENST00000367621 PLEKHA5Q9HAU0 1116 aa10.23□□□□□ -0.77
VTA1-201ENST00000367621 CHST12Q9NRB3 414 aa10.23□□□□□ -0.77
VTA1-201ENST00000367621 PADI3Q9ULW8 664 aa10.23□□□□□ -0.77
VTA1-201ENST00000367621 NENFQ9UMX5 172 aa10.23□□□□□ -0.77
VTA1-201ENST00000367621 PPP2R2CQ9Y2T4 447 aa10.23□□□□□ -0.77
VTA1-201ENST00000367621 NUB1Q9Y5A7 615 aa10.23□□□□□ -0.77
VTA1-201ENST00000367621 UMODL1Q5DID0 1318 aa10.23□□□□□ -0.77
VTA1-201ENST00000367621 EVPLQ92817 2033 aa10.23□□□□□ -0.77
VTA1-201ENST00000367621 SSU72P8A0A1W2PR75 194 aa10.22□□□□□ -0.77
VTA1-201ENST00000367621 M0QZ92 97 aa10.22□□□□□ -0.77
VTA1-201ENST00000367621 MGEA5O60502 916 aa10.22□□□□□ -0.77
VTA1-201ENST00000367621 NDUFA10O95299 355 aa10.22□□□□□ -0.77
VTA1-201ENST00000367621 LCA5LO95447 670 aa10.22□□□□□ -0.77
VTA1-201ENST00000367621 SGPL1O95470 568 aa10.22□□□□□ -0.77
VTA1-201ENST00000367621 ADH1BP00325 375 aa10.22□□□□□ -0.77
VTA1-201ENST00000367621 ASS1P00966 412 aaKnown RBP10.22□□□□□ -0.77
VTA1-201ENST00000367621 SERPING1P05155 500 aa10.22□□□□□ -0.77
VTA1-201ENST00000367621 GHRP10912 638 aa10.22□□□□□ -0.77
VTA1-201ENST00000367621 COL6A1P12109 1028 aa10.22□□□□□ -0.77
VTA1-201ENST00000367621 ACO1P21399 889 aaKnown RBP10.22□□□□□ -0.77
VTA1-201ENST00000367621 STAT1P42224 750 aa10.22□□□□□ -0.77
VTA1-201ENST00000367621 GUCY2FP51841 1108 aa10.22□□□□□ -0.77
VTA1-201ENST00000367621 MYL6P60660 151 aa10.22□□□□□ -0.77
VTA1-201ENST00000367621 TFAMQ00059 246 aaKnown RBP10.22□□□□□ -0.77
VTA1-201ENST00000367621 GCNT1Q02742 428 aa10.22□□□□□ -0.77
VTA1-201ENST00000367621 BIRC3Q13489 604 aa10.22□□□□□ -0.77
VTA1-201ENST00000367621 NCOA4Q13772 614 aa10.22□□□□□ -0.77
VTA1-201ENST00000367621 ASIC2Q16515 512 aa10.22□□□□□ -0.77
VTA1-201ENST00000367621 ARHGAP44Q17R89 818 aa10.22□□□□□ -0.77
VTA1-201ENST00000367621 ZNF571Q7Z3V5 609 aaPredicted RBP10.22□□□□□ -0.77
VTA1-201ENST00000367621 MRPL10Q7Z7H8 261 aaKnown RBP10.22□□□□□ -0.77
VTA1-201ENST00000367621 FAM71AQ8IYT1 594 aa10.22□□□□□ -0.77
VTA1-201ENST00000367621 CCDC170Q8IYT3 715 aa10.22□□□□□ -0.77
VTA1-201ENST00000367621 U2AF1L4Q8WU68 220 aaKnown RBP10.22□□□□□ -0.77
VTA1-201ENST00000367621 SHC3Q92529 594 aa10.22□□□□□ -0.77
VTA1-201ENST00000367621 PPP1R13BQ96KQ4 1090 aa10.22□□□□□ -0.77
VTA1-201ENST00000367621 NT5C1BQ96P26 610 aa10.22□□□□□ -0.77
VTA1-201ENST00000367621 ARID3AQ99856 593 aa10.22□□□□□ -0.77
VTA1-201ENST00000367621 TRAIPQ9BWF2 469 aa10.22□□□□□ -0.77
VTA1-201ENST00000367621 ZNHIT6Q9NWK9 470 aaKnown RBP10.22□□□□□ -0.77
VTA1-201ENST00000367621 TRMT1Q9NXH9 659 aaKnown RBP10.22□□□□□ -0.77
VTA1-201ENST00000367621 CNTN3Q9P232 1028 aa10.22□□□□□ -0.77
VTA1-201ENST00000367621 C2CD2Q9Y426 696 aa10.22□□□□□ -0.77
VTA1-201ENST00000367621 IPPQ9Y573 584 aa10.22□□□□□ -0.77
VTA1-201ENST00000367621 SQORQ9Y6N5 450 aa10.22□□□□□ -0.77
VTA1-201ENST00000367621 RCCD1A6NED2 376 aa10.21□□□□□ -0.77
VTA1-201ENST00000367621 MEIS3P2A8K0S8 358 aa10.21□□□□□ -0.77
VTA1-201ENST00000367621 EIF3CLB5ME19 914 aaKnown RBP10.21□□□□□ -0.77
VTA1-201ENST00000367621 GPR182O15218 404 aa10.21□□□□□ -0.77
VTA1-201ENST00000367621 NRDCO43847 1150 aa10.21□□□□□ -0.77
VTA1-201ENST00000367621 RECQL4O94761 1208 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms