RNA–Protein interactions for RNA: ENST00000367178.7

SCAF8-201, Transcript of SR-related CTD associated factor 8, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SCAF8, Length 5,057 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-201ENST00000367178 NUDCD3Q8IVD9 361 aa17.39■□□□□ 0.37
SCAF8-201ENST00000367178 AGAP3Q96P47 875 aa17.39■□□□□ 0.37
SCAF8-201ENST00000367178 DDX50Q9BQ39 737 aaKnown RBP17.39■□□□□ 0.37
SCAF8-201ENST00000367178 RAB6BQ9NRW1 208 aa17.39■□□□□ 0.37
SCAF8-201ENST00000367178 OLA1Q9NTK5 396 aaKnown RBP17.39■□□□□ 0.37
SCAF8-201ENST00000367178 HACD3Q9P035 362 aa17.39■□□□□ 0.37
SCAF8-201ENST00000367178 CD44P16070 742 aaKnown RBP17.39■□□□□ 0.37
SCAF8-201ENST00000367178 ACADSBP45954 432 aa17.39■□□□□ 0.37
SCAF8-201ENST00000367178 DEUP1Q05D60 604 aa17.39■□□□□ 0.37
SCAF8-201ENST00000367178 LRRC14Q15048 493 aa17.39■□□□□ 0.37
SCAF8-201ENST00000367178 ANKS1AQ92625 1134 aa17.39■□□□□ 0.37
SCAF8-201ENST00000367178 DCTN4Q9UJW0 460 aa17.39■□□□□ 0.37
SCAF8-201ENST00000367178 PLAGL2Q9UPG8 496 aa17.39■□□□□ 0.37
SCAF8-201ENST00000367178 CCDC195A0A1B0GUA6 201 aa17.39■□□□□ 0.37
SCAF8-201ENST00000367178 MDM2Q00987 491 aaPredicted RBP17.39■□□□□ 0.37
SCAF8-201ENST00000367178 P3H1Q32P28 736 aa17.39■□□□□ 0.37
SCAF8-201ENST00000367178 CYTH2Q99418 400 aa17.39■□□□□ 0.37
SCAF8-201ENST00000367178 PDCD2LQ9BRP1 358 aa17.39■□□□□ 0.37
SCAF8-201ENST00000367178 MMTAG2Q9BU76 263 aaKnown RBP17.39■□□□□ 0.37
SCAF8-201ENST00000367178 TRPV6Q9H1D0 765 aa17.39■□□□□ 0.37
SCAF8-201ENST00000367178 ORC6Q9Y5N6 252 aa17.39■□□□□ 0.37
SCAF8-201ENST00000367178 C3orf70A6NLC5 250 aaPredicted RBP17.38■□□□□ 0.37
SCAF8-201ENST00000367178 ITGB3P05106 788 aa17.38■□□□□ 0.37
SCAF8-201ENST00000367178 KITP10721 976 aa17.38■□□□□ 0.37
SCAF8-201ENST00000367178 CBWD2Q8IUF1 395 aa17.38■□□□□ 0.37
SCAF8-201ENST00000367178 GPBP1L1Q9HC44 474 aaPredicted RBP17.38■□□□□ 0.37
SCAF8-201ENST00000367178 RFC1P35251 1148 aaPredicted RBP17.38■□□□□ 0.37
SCAF8-201ENST00000367178 GCLCP48506 637 aaPredicted RBP17.38■□□□□ 0.37
SCAF8-201ENST00000367178 GIT2Q14161 759 aa17.38■□□□□ 0.37
SCAF8-201ENST00000367178 UBA3Q8TBC4 463 aa17.38■□□□□ 0.37
SCAF8-201ENST00000367178 TGS1Q96RS0 853 aaKnown RBP17.38■□□□□ 0.37
SCAF8-201ENST00000367178 EPHX2P34913 555 aa17.38■□□□□ 0.37
SCAF8-201ENST00000367178 CLCN3P51790 818 aa17.38■□□□□ 0.37
SCAF8-201ENST00000367178 SYTL5Q8TDW5 730 aaPredicted RBP17.38■□□□□ 0.37
SCAF8-201ENST00000367178 ASAP3Q8TDY4 903 aa17.38■□□□□ 0.37
SCAF8-201ENST00000367178 RBM15Q96T37 977 aaKnown RBP eCLIP17.38■□□□□ 0.371e-7■■■□□ 18.3
SCAF8-201ENST00000367178 TMEM106CQ9BVX2 250 aa17.38■□□□□ 0.37
SCAF8-201ENST00000367178 INTUQ9ULD6 942 aa17.38■□□□□ 0.37
SCAF8-201ENST00000367178 PPME1Q9Y570 386 aa17.38■□□□□ 0.37
SCAF8-201ENST00000367178 GYG2O15488 501 aa17.38■□□□□ 0.37
SCAF8-201ENST00000367178 ITIH2P19823 946 aa17.38■□□□□ 0.37
SCAF8-201ENST00000367178 NPTX2P47972 431 aa17.38■□□□□ 0.37
SCAF8-201ENST00000367178 Q4G0T1 1027 aa17.38■□□□□ 0.37
SCAF8-201ENST00000367178 SEZ6Q53EL9 994 aa17.38■□□□□ 0.37
SCAF8-201ENST00000367178 TRIM65Q6PJ69 517 aa17.38■□□□□ 0.37
SCAF8-201ENST00000367178 DCP1BQ8IZD4 617 aaKnown RBP17.38■□□□□ 0.37
SCAF8-201ENST00000367178 MTIF3Q9H2K0 278 aaKnown RBP17.38■□□□□ 0.37
SCAF8-201ENST00000367178 IL17RBQ9NRM6 502 aa17.38■□□□□ 0.37
SCAF8-201ENST00000367178 BRD2P25440 801 aaKnown RBP17.37■□□□□ 0.37
SCAF8-201ENST00000367178 GNL1P36915 607 aaPredicted RBP17.37■□□□□ 0.37
SCAF8-201ENST00000367178 RGS2P41220 211 aa17.37■□□□□ 0.37
SCAF8-201ENST00000367178 NAMPTP43490 491 aa17.37■□□□□ 0.37
SCAF8-201ENST00000367178 RASIP1Q5U651 963 aa17.37■□□□□ 0.37
SCAF8-201ENST00000367178 TAS2R42Q7RTR8 314 aa17.37■□□□□ 0.37
SCAF8-201ENST00000367178 PLEKHH3Q7Z736 793 aa17.37■□□□□ 0.37
SCAF8-201ENST00000367178 RBM12Q9NTZ6 932 aaKnown RBP17.37■□□□□ 0.37
SCAF8-201ENST00000367178 UBQLN1Q9UMX0 589 aaKnown RBP17.37■□□□□ 0.37
SCAF8-201ENST00000367178 CFAP69A5D8W1 941 aa17.37■□□□□ 0.37
SCAF8-201ENST00000367178 GUCY2CP25092 1073 aa17.37■□□□□ 0.37
SCAF8-201ENST00000367178 OR1G1P47890 313 aa17.37■□□□□ 0.37
SCAF8-201ENST00000367178 TAF6P49848 677 aa17.37■□□□□ 0.37
SCAF8-201ENST00000367178 ZNF484Q5JVG2 852 aa17.37■□□□□ 0.37
SCAF8-201ENST00000367178 PCNX4Q63HM2 1172 aa17.37■□□□□ 0.37
SCAF8-201ENST00000367178 KDELC2Q7Z4H8 507 aa17.37■□□□□ 0.37
SCAF8-201ENST00000367178 RNF135Q8IUD6 432 aa17.37■□□□□ 0.37
SCAF8-201ENST00000367178 BTBD6Q96KE9 485 aa17.37■□□□□ 0.37
SCAF8-201ENST00000367178 ZNF512Q96ME7 567 aaPredicted RBP17.37■□□□□ 0.37
SCAF8-201ENST00000367178 SENP1Q9P0U3 644 aa17.37■□□□□ 0.37
SCAF8-201ENST00000367178 PPP2R3BQ9Y5P8 575 aa17.37■□□□□ 0.37
SCAF8-201ENST00000367178 VWDEQ8N2E2 1590 aa17.37■□□□□ 0.37
SCAF8-201ENST00000367178 PPLO60437 1756 aa17.37■□□□□ 0.37
SCAF8-201ENST00000367178 HMBSP08397 361 aa17.37■□□□□ 0.37
SCAF8-201ENST00000367178 PNPLA4P41247 253 aa17.37■□□□□ 0.37
SCAF8-201ENST00000367178 SYCP2LQ5T4T6 812 aa17.37■□□□□ 0.37
SCAF8-201ENST00000367178 ARHGEF26Q96DR7 871 aa17.37■□□□□ 0.37
SCAF8-201ENST00000367178 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.37■□□□□ 0.372e-9■■□□□ 11.5
SCAF8-201ENST00000367178 MROH2AA6NES4 1674 aa17.37■□□□□ 0.37
SCAF8-201ENST00000367178 SPAG7O75391 227 aa17.37■□□□□ 0.37
SCAF8-201ENST00000367178 FCGRTP55899 365 aa17.37■□□□□ 0.37
SCAF8-201ENST00000367178 CUL2Q13617 745 aa17.37■□□□□ 0.37
SCAF8-201ENST00000367178 BYSLQ13895 437 aaKnown RBP17.37■□□□□ 0.37
SCAF8-201ENST00000367178 DCAF4L1Q3SXM0 396 aa17.37■□□□□ 0.37
SCAF8-201ENST00000367178 FASTKD1Q53R41 847 aaKnown RBP17.37■□□□□ 0.37
SCAF8-201ENST00000367178 TTI2Q6NXR4 508 aa17.37■□□□□ 0.37
SCAF8-201ENST00000367178 CBWD1Q9BRT8 395 aa17.37■□□□□ 0.37
SCAF8-201ENST00000367178 PXMP2Q9NR77 195 aa17.37■□□□□ 0.37
SCAF8-201ENST00000367178 ZFP69BQ9UJL9 534 aa17.37■□□□□ 0.37
SCAF8-201ENST00000367178 GTF3C4Q9UKN8 822 aa17.37■□□□□ 0.37
SCAF8-201ENST00000367178 C17orf102A2RUQ5 167 aa17.36■□□□□ 0.37
SCAF8-201ENST00000367178 CYBBP04839 570 aa17.36■□□□□ 0.37
SCAF8-201ENST00000367178 GOLGA7BQ2TAP0 167 aa17.36■□□□□ 0.37
SCAF8-201ENST00000367178 FAM117BQ6P1L5 589 aa17.36■□□□□ 0.37
SCAF8-201ENST00000367178 RNF180Q86T96 592 aa17.36■□□□□ 0.37
SCAF8-201ENST00000367178 FBXO16Q8IX29 292 aaPredicted RBP17.36■□□□□ 0.37
SCAF8-201ENST00000367178 HIPK4Q8NE63 616 aa17.36■□□□□ 0.37
SCAF8-201ENST00000367178 FEZF2Q8TBJ5 459 aa17.36■□□□□ 0.37
SCAF8-201ENST00000367178 ATXN7L3BQ96GX2 97 aa17.36■□□□□ 0.37
SCAF8-201ENST00000367178 C9orf72Q96LT7 481 aa17.36■□□□□ 0.37
SCAF8-201ENST00000367178 EGFL8Q99944 293 aa17.36■□□□□ 0.37
SCAF8-201ENST00000367178 SMARCAL1Q9NZC9 954 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms