RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 TMEM191CA6NGB0 347 aa5.95□□□□□ -1.46
RNU4-28P-201ENST00000364739 B3GALT2O43825 422 aa5.95□□□□□ -1.46
RNU4-28P-201ENST00000364739 ERN1O75460 977 aaKnown RBP5.95□□□□□ -1.46
RNU4-28P-201ENST00000364739 ALDH1L1O75891 902 aa5.95□□□□□ -1.46
RNU4-28P-201ENST00000364739 PDGFRBP09619 1106 aa5.95□□□□□ -1.46
RNU4-28P-201ENST00000364739 ITGAMP11215 1152 aa5.95□□□□□ -1.46
RNU4-28P-201ENST00000364739 MTHFD1P11586 935 aaKnown RBP5.95□□□□□ -1.46
RNU4-28P-201ENST00000364739 MALP21145 153 aa5.95□□□□□ -1.46
RNU4-28P-201ENST00000364739 PHKA1P46020 1223 aa5.95□□□□□ -1.46
RNU4-28P-201ENST00000364739 CXADRP78310 365 aa5.95□□□□□ -1.46
RNU4-28P-201ENST00000364739 SPDYE7PQ495Y7 208 aa5.95□□□□□ -1.46
RNU4-28P-201ENST00000364739 PPP4R3AQ6IN85 833 aa5.95□□□□□ -1.46
RNU4-28P-201ENST00000364739 GPR149Q86SP6 731 aa5.95□□□□□ -1.46
RNU4-28P-201ENST00000364739 IL17RDQ8NFM7 739 aa5.95□□□□□ -1.46
RNU4-28P-201ENST00000364739 HSPBAP1Q96EW2 488 aa5.95□□□□□ -1.46
RNU4-28P-201ENST00000364739 PRRX2Q99811 253 aa5.95□□□□□ -1.46
RNU4-28P-201ENST00000364739 CYP4F11Q9HBI6 524 aa5.95□□□□□ -1.46
RNU4-28P-201ENST00000364739 NOX1Q9Y5S8 564 aa5.95□□□□□ -1.46
RNU4-28P-201ENST00000364739 WDR33Q9C0J8 1336 aaKnown RBP5.95□□□□□ -1.46
RNU4-28P-201ENST00000364739 F2RL2O00254 374 aa5.94□□□□□ -1.46
RNU4-28P-201ENST00000364739 HAUS5O94927 633 aa5.94□□□□□ -1.46
RNU4-28P-201ENST00000364739 GCP02774 474 aa5.94□□□□□ -1.46
RNU4-28P-201ENST00000364739 POU2F2P09086 479 aa5.94□□□□□ -1.46
RNU4-28P-201ENST00000364739 PROZP22891 400 aa5.94□□□□□ -1.46
RNU4-28P-201ENST00000364739 PLA2G5P39877 138 aa5.94□□□□□ -1.46
RNU4-28P-201ENST00000364739 SCAPQ12770 1279 aa5.94□□□□□ -1.46
RNU4-28P-201ENST00000364739 RAB39AQ14964 217 aa5.94□□□□□ -1.46
RNU4-28P-201ENST00000364739 CYP2A13Q16696 494 aa5.94□□□□□ -1.46
RNU4-28P-201ENST00000364739 ATP2B3Q16720 1220 aa5.94□□□□□ -1.46
RNU4-28P-201ENST00000364739 FOXR2Q6PJQ5 311 aa5.94□□□□□ -1.46
RNU4-28P-201ENST00000364739 Q6YL49 198 aa5.94□□□□□ -1.46
RNU4-28P-201ENST00000364739 TTC7BQ86TV6 843 aa5.94□□□□□ -1.46
RNU4-28P-201ENST00000364739 SLC17A8Q8NDX2 589 aa5.94□□□□□ -1.46
RNU4-28P-201ENST00000364739 NLGN4YQ8NFZ3 816 aaPredicted RBP5.94□□□□□ -1.46
RNU4-28P-201ENST00000364739 NUP133Q8WUM0 1156 aa5.94□□□□□ -1.46
RNU4-28P-201ENST00000364739 KLHL32Q96NJ5 620 aa5.94□□□□□ -1.46
RNU4-28P-201ENST00000364739 CDYLQ9Y232 598 aa5.94□□□□□ -1.46
RNU4-28P-201ENST00000364739 CFAP20Q9Y6A4 193 aaKnown RBP5.94□□□□□ -1.46
RNU4-28P-201ENST00000364739 PIPSLA2A3N6 862 aa5.93□□□□□ -1.46
RNU4-28P-201ENST00000364739 PPFIA4O75335 1185 aa5.93□□□□□ -1.46
RNU4-28P-201ENST00000364739 SLC43A1O75387 559 aa5.93□□□□□ -1.46
RNU4-28P-201ENST00000364739 FOSP01100 380 aaPredicted RBP5.93□□□□□ -1.46
RNU4-28P-201ENST00000364739 PF4V1P10720 104 aa5.93□□□□□ -1.46
RNU4-28P-201ENST00000364739 EGR2P11161 476 aaPredicted RBP5.93□□□□□ -1.46
RNU4-28P-201ENST00000364739 COL10A1Q03692 680 aa5.93□□□□□ -1.46
RNU4-28P-201ENST00000364739 TTF1Q15361 905 aaPredicted RBP5.93□□□□□ -1.46
RNU4-28P-201ENST00000364739 GEN1Q17RS7 908 aa5.93□□□□□ -1.46
RNU4-28P-201ENST00000364739 HECTD2Q5U5R9 776 aa5.93□□□□□ -1.46
RNU4-28P-201ENST00000364739 USP45Q70EL2 814 aa5.93□□□□□ -1.46
RNU4-28P-201ENST00000364739 PRR18Q8N4B5 295 aa5.93□□□□□ -1.46
RNU4-28P-201ENST00000364739 SH2D3CQ8N5H7 860 aa5.93□□□□□ -1.46
RNU4-28P-201ENST00000364739 TMIEQ8NEW7 156 aa5.93□□□□□ -1.46
RNU4-28P-201ENST00000364739 PNKPQ96T60 521 aa5.93□□□□□ -1.46
RNU4-28P-201ENST00000364739 C1orf43Q9BWL3 253 aa5.93□□□□□ -1.46
RNU4-28P-201ENST00000364739 PACSIN1Q9BY11 444 aa5.93□□□□□ -1.46
RNU4-28P-201ENST00000364739 GTPBP4Q9BZE4 634 aaKnown RBP5.93□□□□□ -1.46
RNU4-28P-201ENST00000364739 IMPG2Q9BZV3 1241 aa5.93□□□□□ -1.46
RNU4-28P-201ENST00000364739 SLAMF7Q9NQ25 335 aa5.93□□□□□ -1.46
RNU4-28P-201ENST00000364739 CALCOCO1Q9P1Z2 691 aa5.93□□□□□ -1.46
RNU4-28P-201ENST00000364739 TESQ9UGI8 421 aaKnown RBP5.93□□□□□ -1.46
RNU4-28P-201ENST00000364739 EPN1Q9Y6I3 576 aaPredicted RBP5.93□□□□□ -1.46
RNU4-28P-201ENST00000364739 NT5C1B-RDH14C9J2C7 533 aa5.92□□□□□ -1.46
RNU4-28P-201ENST00000364739 FOXI1Q12951 378 aa5.92□□□□□ -1.46
RNU4-28P-201ENST00000364739 RAVER1Q8IY67 606 aaKnown RBP5.92□□□□□ -1.46
RNU4-28P-201ENST00000364739 SLC44A3Q8N4M1 653 aa5.92□□□□□ -1.46
RNU4-28P-201ENST00000364739 Q8NA96 180 aa5.92□□□□□ -1.46
RNU4-28P-201ENST00000364739 C3orf20Q8ND61 904 aa5.92□□□□□ -1.46
RNU4-28P-201ENST00000364739 FBXO41Q8TF61 875 aa5.92□□□□□ -1.46
RNU4-28P-201ENST00000364739 CAVIN3Q969G5 261 aa5.92□□□□□ -1.46
RNU4-28P-201ENST00000364739 LRIG1Q96JA1 1093 aa5.92□□□□□ -1.46
RNU4-28P-201ENST00000364739 Q96MF0 132 aa5.92□□□□□ -1.46
RNU4-28P-201ENST00000364739 SYBUQ9NX95 663 aa5.92□□□□□ -1.46
RNU4-28P-201ENST00000364739 JKAMPQ9P055 326 aa5.92□□□□□ -1.46
RNU4-28P-201ENST00000364739 SALL3Q9BXA9 1300 aa5.92□□□□□ -1.46
RNU4-28P-201ENST00000364739 PRSS29PA6NIE9 313 aa5.91□□□□□ -1.46
RNU4-28P-201ENST00000364739 RPLP2P05387 115 aaKnown RBP5.91□□□□□ -1.46
RNU4-28P-201ENST00000364739 SMARCA1P28370 1054 aa5.91□□□□□ -1.46
RNU4-28P-201ENST00000364739 RAB27AP51159 221 aa5.91□□□□□ -1.46
RNU4-28P-201ENST00000364739 USP14P54578 494 aa5.91□□□□□ -1.46
RNU4-28P-201ENST00000364739 PSMC1P62191 440 aaKnown RBP5.91□□□□□ -1.46
RNU4-28P-201ENST00000364739 MXRA7P84157 204 aa5.91□□□□□ -1.46
RNU4-28P-201ENST00000364739 MCL1Q07820 350 aa5.91□□□□□ -1.46
RNU4-28P-201ENST00000364739 CCDC93Q567U6 631 aa5.91□□□□□ -1.46
RNU4-28P-201ENST00000364739 TMEM240Q5SV17 173 aa5.91□□□□□ -1.46
RNU4-28P-201ENST00000364739 SLC4A10Q6U841 1118 aa5.91□□□□□ -1.46
RNU4-28P-201ENST00000364739 PDPRQ8NCN5 879 aa5.91□□□□□ -1.46
RNU4-28P-201ENST00000364739 BOD1Q96IK1 185 aa5.91□□□□□ -1.46
RNU4-28P-201ENST00000364739 UNKLQ9H9P5 680 aaKnown RBP5.91□□□□□ -1.46
RNU4-28P-201ENST00000364739 GALNT9Q9HCQ5 603 aa5.91□□□□□ -1.46
RNU4-28P-201ENST00000364739 MRPS18AQ9NVS2 196 aaKnown RBP5.91□□□□□ -1.46
RNU4-28P-201ENST00000364739 C11orf21Q9P2W6 132 aa5.91□□□□□ -1.46
RNU4-28P-201ENST00000364739 KCNE5Q9UJ90 142 aa5.91□□□□□ -1.46
RNU4-28P-201ENST00000364739 PACSIN3Q9UKS6 424 aa5.91□□□□□ -1.46
RNU4-28P-201ENST00000364739 FTLP02792 175 aaPredicted RBP5.9□□□□□ -1.46
RNU4-28P-201ENST00000364739 MAP2K6P52564 334 aa5.9□□□□□ -1.46
RNU4-28P-201ENST00000364739 ZNF267Q14586 743 aaPredicted RBP5.9□□□□□ -1.46
RNU4-28P-201ENST00000364739 KRTAP15-1Q3LI76 137 aa5.9□□□□□ -1.46
RNU4-28P-201ENST00000364739 CD300EQ496F6 205 aaPredicted RBP5.9□□□□□ -1.46
RNU4-28P-201ENST00000364739 ABHD17BQ5VST6 288 aa5.9□□□□□ -1.46
RNU4-28P-201ENST00000364739 ZNF365Q70YC5 407 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms