RNA–Protein interactions for RNA: ENST00000363904.1

RNU6-478P-201, Transcript of RNA, U6 small nuclear 478, pseudogene, humanhuman

BASIC

Gene RNU6-478P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-478P-201ENST00000363904 DSC2Q02487 901 aa0.61□□□□□ -2.31
RNU6-478P-201ENST00000363904 POU5F1BQ06416 359 aa0.61□□□□□ -2.31
RNU6-478P-201ENST00000363904 SRSF1Q07955 248 aaKnown RBP eCLIP0.61□□□□□ -2.31
RNU6-478P-201ENST00000363904 TRIM25Q14258 630 aaKnown RBP0.61□□□□□ -2.31
RNU6-478P-201ENST00000363904 C14orf177Q52M58 125 aa0.61□□□□□ -2.31
RNU6-478P-201ENST00000363904 PRAMEF9Q5VWM5 478 aa0.61□□□□□ -2.31
RNU6-478P-201ENST00000363904 PMS2CLQ68D20 193 aa0.61□□□□□ -2.31
RNU6-478P-201ENST00000363904 HS2ST1Q7LGA3 356 aa0.61□□□□□ -2.31
RNU6-478P-201ENST00000363904 TMC4Q7Z404 712 aa0.61□□□□□ -2.31
RNU6-478P-201ENST00000363904 ZNF804AQ7Z570 1209 aa0.61□□□□□ -2.31
RNU6-478P-201ENST00000363904 RTN4RL1Q86UN2 441 aaPredicted RBP0.61□□□□□ -2.31
RNU6-478P-201ENST00000363904 ANKRD13BQ86YJ7 626 aa0.61□□□□□ -2.31
RNU6-478P-201ENST00000363904 ZZZ3Q8IYH5 903 aa0.61□□□□□ -2.31
RNU6-478P-201ENST00000363904 OR6P1Q8NGX9 317 aa0.61□□□□□ -2.31
RNU6-478P-201ENST00000363904 MYCBPAPQ8TBZ2 947 aa0.61□□□□□ -2.31
RNU6-478P-201ENST00000363904 TBC1D5Q92609 795 aa0.61□□□□□ -2.31
RNU6-478P-201ENST00000363904 TMEM125Q96AQ2 219 aa0.61□□□□□ -2.31
RNU6-478P-201ENST00000363904 NLRP4Q96MN2 994 aa0.61□□□□□ -2.31
RNU6-478P-201ENST00000363904 MYLK2Q9H1R3 596 aa0.61□□□□□ -2.31
RNU6-478P-201ENST00000363904 KLC4Q9NSK0 619 aa0.61□□□□□ -2.31
RNU6-478P-201ENST00000363904 NCKIPSDQ9NZQ3 722 aa0.61□□□□□ -2.31
RNU6-478P-201ENST00000363904 TNPO3Q9Y5L0 923 aaKnown RBP0.61□□□□□ -2.31
RNU6-478P-201ENST00000363904 PRRC2AP48634 2157 aaKnown RBP0.6□□□□□ -2.31
RNU6-478P-201ENST00000363904 ZNF561-AS1K7EIQ3 104 aa0.6□□□□□ -2.31
RNU6-478P-201ENST00000363904 HIP1RO75146 1068 aa0.6□□□□□ -2.31
RNU6-478P-201ENST00000363904 GJB6O95452 261 aa0.6□□□□□ -2.31
RNU6-478P-201ENST00000363904 SYF2O95926 243 aaKnown RBP0.6□□□□□ -2.31
RNU6-478P-201ENST00000363904 PAK4O96013 591 aaPredicted RBP0.6□□□□□ -2.31
RNU6-478P-201ENST00000363904 DNAH10OSP0CZ25 163 aa0.6□□□□□ -2.31
RNU6-478P-201ENST00000363904 RNF224P0DH78 156 aa0.6□□□□□ -2.31
RNU6-478P-201ENST00000363904 PKMP14618 531 aaKnown RBP0.6□□□□□ -2.31
RNU6-478P-201ENST00000363904 MYF6P23409 242 aa0.6□□□□□ -2.31
RNU6-478P-201ENST00000363904 CRIP2P52943 208 aaPredicted RBP0.6□□□□□ -2.31
RNU6-478P-201ENST00000363904 NXPH1P58417 271 aa0.6□□□□□ -2.31
RNU6-478P-201ENST00000363904 RAP2BP61225 183 aa0.6□□□□□ -2.31
RNU6-478P-201ENST00000363904 LMAN2Q12907 356 aa0.6□□□□□ -2.31
RNU6-478P-201ENST00000363904 BFSP2Q13515 415 aa0.6□□□□□ -2.31
RNU6-478P-201ENST00000363904 ZNF718Q3SXZ3 478 aa0.6□□□□□ -2.31
RNU6-478P-201ENST00000363904 KIAA1755Q5JYT7 1200 aa0.6□□□□□ -2.31
RNU6-478P-201ENST00000363904 CATSPEREQ5SY80 951 aa0.6□□□□□ -2.31
RNU6-478P-201ENST00000363904 PDZD4Q76G19 769 aaPredicted RBP0.6□□□□□ -2.31
RNU6-478P-201ENST00000363904 RBM23Q86U06 439 aaKnown RBP0.6□□□□□ -2.31
RNU6-478P-201ENST00000363904 HAPLN4Q86UW8 402 aa0.6□□□□□ -2.31
RNU6-478P-201ENST00000363904 SUGP2Q8IX01 1082 aaKnown RBP eCLIP0.6□□□□□ -2.31
RNU6-478P-201ENST00000363904 B3GALNT2Q8NCR0 500 aa0.6□□□□□ -2.31
RNU6-478P-201ENST00000363904 MIB2Q96AX9 1013 aa0.6□□□□□ -2.31
RNU6-478P-201ENST00000363904 FOXRED1Q96CU9 486 aaPredicted RBP0.6□□□□□ -2.31
RNU6-478P-201ENST00000363904 MAML3Q96JK9 1138 aa0.6□□□□□ -2.31
RNU6-478P-201ENST00000363904 PBKQ96KB5 322 aa0.6□□□□□ -2.31
RNU6-478P-201ENST00000363904 HIST1H2AHQ96KK5 128 aa0.6□□□□□ -2.31
RNU6-478P-201ENST00000363904 HIST1H2AJQ99878 128 aa0.6□□□□□ -2.31
RNU6-478P-201ENST00000363904 IER2Q9BTL4 223 aa0.6□□□□□ -2.31
RNU6-478P-201ENST00000363904 IGLV5-39A0A0G2JS06 123 aa0.59□□□□□ -2.31
RNU6-478P-201ENST00000363904 UBA6A0AVT1 1052 aaPredicted RBP0.59□□□□□ -2.31
RNU6-478P-201ENST00000363904 DLX3O60479 287 aa0.59□□□□□ -2.31
RNU6-478P-201ENST00000363904 USP1O94782 785 aa0.59□□□□□ -2.31
RNU6-478P-201ENST00000363904 GCSHP23434 173 aa0.59□□□□□ -2.31
RNU6-478P-201ENST00000363904 ID2Q02363 134 aa0.59□□□□□ -2.31
RNU6-478P-201ENST00000363904 POU3F1Q03052 451 aaPredicted RBP0.59□□□□□ -2.31
RNU6-478P-201ENST00000363904 FPGSQ05932 587 aa0.59□□□□□ -2.31
RNU6-478P-201ENST00000363904 ITIH3Q06033 890 aa0.59□□□□□ -2.31
RNU6-478P-201ENST00000363904 PDE4CQ08493 712 aa0.59□□□□□ -2.31
RNU6-478P-201ENST00000363904 TM4SF20Q53R12 229 aa0.59□□□□□ -2.31
RNU6-478P-201ENST00000363904 XKR6Q5GH73 641 aa0.59□□□□□ -2.31
RNU6-478P-201ENST00000363904 FAM47CQ5HY64 1035 aa0.59□□□□□ -2.31
RNU6-478P-201ENST00000363904 TTC38Q5R3I4 469 aa0.59□□□□□ -2.31
RNU6-478P-201ENST00000363904 CC2D1AQ6P1N0 951 aaPredicted RBP0.59□□□□□ -2.31
RNU6-478P-201ENST00000363904 DSTYKQ6XUX3 929 aa0.59□□□□□ -2.31
RNU6-478P-201ENST00000363904 SLC39A5Q6ZMH5 540 aa0.59□□□□□ -2.31
RNU6-478P-201ENST00000363904 B4GALNT4Q76KP1 1039 aa0.59□□□□□ -2.31
RNU6-478P-201ENST00000363904 Q7L0L9 218 aa0.59□□□□□ -2.31
RNU6-478P-201ENST00000363904 C16orf59Q7L2K0 433 aa0.59□□□□□ -2.31
RNU6-478P-201ENST00000363904 DPH6Q7L8W6 267 aa0.59□□□□□ -2.31
RNU6-478P-201ENST00000363904 TAS1R1Q7RTX1 841 aa0.59□□□□□ -2.31
RNU6-478P-201ENST00000363904 DAAM2Q86T65 1068 aa0.59□□□□□ -2.31
RNU6-478P-201ENST00000363904 MTDHQ86UE4 582 aaKnown RBP0.59□□□□□ -2.31
RNU6-478P-201ENST00000363904 MMP21Q8N119 569 aa0.59□□□□□ -2.31
RNU6-478P-201ENST00000363904 WDSUB1Q8N9V3 476 aa0.59□□□□□ -2.31
RNU6-478P-201ENST00000363904 MPLKIPQ8TAP9 179 aa0.59□□□□□ -2.31
RNU6-478P-201ENST00000363904 MDM1Q8TC05 714 aa0.59□□□□□ -2.31
RNU6-478P-201ENST00000363904 MED15Q96RN5 788 aa0.59□□□□□ -2.31
RNU6-478P-201ENST00000363904 TUBGCP5Q96RT8 1024 aa0.59□□□□□ -2.31
RNU6-478P-201ENST00000363904 NODALQ96S42 347 aa0.59□□□□□ -2.31
RNU6-478P-201ENST00000363904 NOL10Q9BSC4 688 aaKnown RBP0.59□□□□□ -2.31
RNU6-478P-201ENST00000363904 GNEQ9Y223 722 aaKnown RBP0.59□□□□□ -2.31
RNU6-478P-201ENST00000363904 WDR27A2RRH5 827 aa0.58□□□□□ -2.32
RNU6-478P-201ENST00000363904 AGRPO00253 132 aa0.58□□□□□ -2.32
RNU6-478P-201ENST00000363904 QSOX1O00391 747 aa0.58□□□□□ -2.32
RNU6-478P-201ENST00000363904 PJA2O43164 708 aa0.58□□□□□ -2.32
RNU6-478P-201ENST00000363904 IGLV2-11P01706 119 aa0.58□□□□□ -2.32
RNU6-478P-201ENST00000363904 APOHP02749 345 aaPredicted RBP0.58□□□□□ -2.32
RNU6-478P-201ENST00000363904 SNRPA1P09661 255 aaKnown RBP0.58□□□□□ -2.32
RNU6-478P-201ENST00000363904 SRGAP2CP0DJJ0 459 aa0.58□□□□□ -2.32
RNU6-478P-201ENST00000363904 ZFXP17010 805 aaPredicted RBP0.58□□□□□ -2.32
RNU6-478P-201ENST00000363904 ITGAEP38570 1179 aa0.58□□□□□ -2.32
RNU6-478P-201ENST00000363904 MLH1P40692 756 aa0.58□□□□□ -2.32
RNU6-478P-201ENST00000363904 GRIA2P42262 883 aa0.58□□□□□ -2.32
RNU6-478P-201ENST00000363904 DNM2P50570 870 aa0.58□□□□□ -2.32
RNU6-478P-201ENST00000363904 FXR1P51114 621 aaKnown RBP eCLIP0.58□□□□□ -2.32
RNU6-478P-201ENST00000363904 DSCR9P59020 149 aa0.58□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms