RNA–Protein interactions for RNA: ENST00000362006.11

CCDC7-203, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC7, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-203ENST00000362006 PRKCIP41743 596 aa19.37■□□□□ 0.69
CCDC7-203ENST00000362006 CUL2Q13617 745 aa19.37■□□□□ 0.69
CCDC7-203ENST00000362006 ZNF667Q5HYK9 610 aa19.37■□□□□ 0.69
CCDC7-203ENST00000362006 LRRC52Q8N7C0 313 aa19.37■□□□□ 0.69
CCDC7-203ENST00000362006 SCLYQ96I15 445 aa19.37■□□□□ 0.69
CCDC7-203ENST00000362006 KREMEN1Q96MU8 473 aa19.37■□□□□ 0.69
CCDC7-203ENST00000362006 PPP1R10Q96QC0 940 aaKnown RBP19.37■□□□□ 0.69
CCDC7-203ENST00000362006 GAD1Q99259 594 aa19.37■□□□□ 0.69
CCDC7-203ENST00000362006 NIF3L1Q9GZT8 377 aa19.37■□□□□ 0.69
CCDC7-203ENST00000362006 FAM124BQ9H5Z6 455 aaPredicted RBP19.37■□□□□ 0.69
CCDC7-203ENST00000362006 APOBEC3GQ9HC16 384 aaKnown RBP19.37■□□□□ 0.69
CCDC7-203ENST00000362006 NUB1Q9Y5A7 615 aa19.37■□□□□ 0.69
CCDC7-203ENST00000362006 SSU72P8A0A1W2PR75 194 aa19.37■□□□□ 0.69
CCDC7-203ENST00000362006 ARL5CA6NH57 179 aa19.37■□□□□ 0.69
CCDC7-203ENST00000362006 ENPP3O14638 875 aa19.37■□□□□ 0.69
CCDC7-203ENST00000362006 INPPL1O15357 1258 aa19.37■□□□□ 0.69
CCDC7-203ENST00000362006 TIMP1P01033 207 aa19.37■□□□□ 0.69
CCDC7-203ENST00000362006 EN2P19622 333 aaPredicted RBP19.37■□□□□ 0.69
CCDC7-203ENST00000362006 YWHAEP62258 255 aaKnown RBP19.37■□□□□ 0.69
CCDC7-203ENST00000362006 GLRA4Q5JXX5 417 aa19.37■□□□□ 0.69
CCDC7-203ENST00000362006 IRF2BP2Q7Z5L9 587 aa19.37■□□□□ 0.69
CCDC7-203ENST00000362006 LPPQ93052 612 aa19.37■□□□□ 0.69
CCDC7-203ENST00000362006 HPDLQ96IR7 371 aa19.37■□□□□ 0.69
CCDC7-203ENST00000362006 GPR88Q9GZN0 384 aa19.37■□□□□ 0.69
CCDC7-203ENST00000362006 CXCL16Q9H2A7 254 aa19.37■□□□□ 0.69
CCDC7-203ENST00000362006 TMEM161AQ9NX61 479 aa19.37■□□□□ 0.69
CCDC7-203ENST00000362006 FOXN3O00409 490 aaPredicted RBP19.36■□□□□ 0.69
CCDC7-203ENST00000362006 PTGESO14684 152 aa19.36■□□□□ 0.69
CCDC7-203ENST00000362006 MSNP26038 577 aaKnown RBP19.36■□□□□ 0.69
CCDC7-203ENST00000362006 ANXA13P27216 316 aa19.36■□□□□ 0.69
CCDC7-203ENST00000362006 CYLC1P35663 651 aaPredicted RBP19.36■□□□□ 0.69
CCDC7-203ENST00000362006 MLH1P40692 756 aa19.36■□□□□ 0.69
CCDC7-203ENST00000362006 PNPLA4P41247 253 aa19.36■□□□□ 0.69
CCDC7-203ENST00000362006 KLHL30Q0D2K2 578 aa19.36■□□□□ 0.69
CCDC7-203ENST00000362006 MAPK8IP2Q13387 824 aaPredicted RBP19.36■□□□□ 0.69
CCDC7-203ENST00000362006 SPOPLQ6IQ16 392 aa19.36■□□□□ 0.69
CCDC7-203ENST00000362006 FAM71AQ8IYT1 594 aa19.36■□□□□ 0.69
CCDC7-203ENST00000362006 RNF169Q8NCN4 708 aa19.36■□□□□ 0.69
CCDC7-203ENST00000362006 LINC01599Q8WXQ3 324 aa19.36■□□□□ 0.69
CCDC7-203ENST00000362006 CCDC42Q96M95 316 aa19.36■□□□□ 0.69
CCDC7-203ENST00000362006 CHP1Q99653 195 aa19.36■□□□□ 0.69
CCDC7-203ENST00000362006 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.36■□□□□ 0.69
CCDC7-203ENST00000362006 ANO9A1A5B4 782 aa19.36■□□□□ 0.69
CCDC7-203ENST00000362006 LRPAP1P30533 357 aa19.36■□□□□ 0.69
CCDC7-203ENST00000362006 E4F1Q66K89 784 aaPredicted RBP19.36■□□□□ 0.69
CCDC7-203ENST00000362006 HGSNATQ68CP4 663 aa19.36■□□□□ 0.69
CCDC7-203ENST00000362006 GSTCDQ8NEC7 633 aa19.36■□□□□ 0.69
CCDC7-203ENST00000362006 RSPH1Q8WYR4 309 aa19.36■□□□□ 0.69
CCDC7-203ENST00000362006 C18orf25Q96B23 403 aaPredicted RBP19.36■□□□□ 0.69
CCDC7-203ENST00000362006 ZFP42Q96MM3 310 aa19.36■□□□□ 0.69
CCDC7-203ENST00000362006 ZNF560Q96MR9 790 aa19.36■□□□□ 0.69
CCDC7-203ENST00000362006 NHEJ1Q9H9Q4 299 aaPredicted RBP19.36■□□□□ 0.69
CCDC7-203ENST00000362006 TUBGCP4Q9UGJ1 667 aa19.36■□□□□ 0.69
CCDC7-203ENST00000362006 SCN5AQ14524 2016 aa19.35■□□□□ 0.69
CCDC7-203ENST00000362006 SOWAHDA6NJG2 315 aa19.35■□□□□ 0.69
CCDC7-203ENST00000362006 MEIS3P2A8K0S8 358 aa19.35■□□□□ 0.69
CCDC7-203ENST00000362006 GFPT2O94808 682 aa19.35■□□□□ 0.69
CCDC7-203ENST00000362006 C9orf57Q5W0N0 161 aa19.35■□□□□ 0.69
CCDC7-203ENST00000362006 CNKSR3Q6P9H4 555 aa19.35■□□□□ 0.69
CCDC7-203ENST00000362006 GLB1LQ6UWU2 654 aa19.35■□□□□ 0.69
CCDC7-203ENST00000362006 TTC39CQ8N584 583 aa19.35■□□□□ 0.69
CCDC7-203ENST00000362006 KIAA1524Q8TCG1 905 aa19.35■□□□□ 0.69
CCDC7-203ENST00000362006 KAT5Q92993 513 aa19.35■□□□□ 0.69
CCDC7-203ENST00000362006 CYP3A43Q9HB55 503 aa19.35■□□□□ 0.69
CCDC7-203ENST00000362006 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.35■□□□□ 0.69
CCDC7-203ENST00000362006 ARHGAP20Q9P2F6 1191 aa19.35■□□□□ 0.69
CCDC7-203ENST00000362006 PYCARDQ9ULZ3 195 aa19.35■□□□□ 0.69
CCDC7-203ENST00000362006 PIRO00625 290 aa19.34■□□□□ 0.69
CCDC7-203ENST00000362006 EVI5O60447 810 aa19.34■□□□□ 0.69
CCDC7-203ENST00000362006 RAG1P15918 1043 aa19.34■□□□□ 0.69
CCDC7-203ENST00000362006 GUCY2FP51841 1108 aa19.34■□□□□ 0.69
CCDC7-203ENST00000362006 BPIFB4P59827 614 aa19.34■□□□□ 0.69
CCDC7-203ENST00000362006 ARID5AQ03989 594 aa19.34■□□□□ 0.69
CCDC7-203ENST00000362006 GRIK3Q13003 919 aa19.34■□□□□ 0.69
CCDC7-203ENST00000362006 WDR72Q3MJ13 1102 aa19.34■□□□□ 0.69
CCDC7-203ENST00000362006 TDRD12Q587J7 1177 aaKnown RBP19.34■□□□□ 0.69
CCDC7-203ENST00000362006 VPS36Q86VN1 386 aa19.34■□□□□ 0.69
CCDC7-203ENST00000362006 DEF6Q9H4E7 631 aa19.34■□□□□ 0.69
CCDC7-203ENST00000362006 KANSL3Q9P2N6 904 aa19.34■□□□□ 0.69
CCDC7-203ENST00000362006 PCDHB7Q9Y5E2 793 aa19.34■□□□□ 0.69
CCDC7-203ENST00000362006 EPN1Q9Y6I3 576 aaPredicted RBP19.34■□□□□ 0.69
CCDC7-203ENST00000362006 CCP110O43303 1012 aa19.34■□□□□ 0.69
CCDC7-203ENST00000362006 HOXA2O43364 376 aa19.34■□□□□ 0.69
CCDC7-203ENST00000362006 OFD1O75665 1012 aa19.34■□□□□ 0.69
CCDC7-203ENST00000362006 RPL9P32969 192 aaKnown RBP19.34■□□□□ 0.69
CCDC7-203ENST00000362006 IKBKEQ14164 716 aa19.34■□□□□ 0.69
CCDC7-203ENST00000362006 RPUSD2Q8IZ73 545 aaKnown RBP19.34■□□□□ 0.69
CCDC7-203ENST00000362006 TMEM199Q8N511 208 aa19.34■□□□□ 0.69
CCDC7-203ENST00000362006 PRDM5Q9NQX1 630 aaPredicted RBP19.34■□□□□ 0.69
CCDC7-203ENST00000362006 CNTN6Q9UQ52 1028 aa19.34■□□□□ 0.69
CCDC7-203ENST00000362006 BRCA2P51587 3418 aa19.34■□□□□ 0.69
CCDC7-203ENST00000362006 IPO7O95373 1038 aaKnown RBP19.33■□□□□ 0.69
CCDC7-203ENST00000362006 PFKMP08237 780 aa19.33■□□□□ 0.69
CCDC7-203ENST00000362006 PAX3P23760 479 aa19.33■□□□□ 0.69
CCDC7-203ENST00000362006 EIF4A3P38919 411 aaKnown RBP19.33■□□□□ 0.69
CCDC7-203ENST00000362006 USP8P40818 1118 aa19.33■□□□□ 0.69
CCDC7-203ENST00000362006 SCARA3Q6AZY7 606 aa19.33■□□□□ 0.69
CCDC7-203ENST00000362006 RAD9BQ6WBX8 426 aa19.33■□□□□ 0.69
CCDC7-203ENST00000362006 DEFB128Q7Z7B8 93 aa19.33■□□□□ 0.69
CCDC7-203ENST00000362006 TET1Q8NFU7 2136 aa19.33■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms