RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 CLMNQ96JQ2 1002 aa9.73□□□□□ -0.85
VPS13A-203ENST00000360280 KCNH2Q12809 1159 aa9.73□□□□□ -0.85
VPS13A-203ENST00000360280 SPATA4Q8NEY3 305 aa9.73□□□□□ -0.85
VPS13A-203ENST00000360280 ERP27Q96DN0 273 aa9.73□□□□□ -0.85
VPS13A-203ENST00000360280 PKP3Q9Y446 797 aa9.73□□□□□ -0.85
VPS13A-203ENST00000360280 MYH8P13535 1937 aa9.73□□□□□ -0.85
VPS13A-203ENST00000360280 CHL1O00533 1208 aa9.73□□□□□ -0.85
VPS13A-203ENST00000360280 DGKHQ86XP1 1220 aa9.73□□□□□ -0.85
VPS13A-203ENST00000360280 MDM1Q8TC05 714 aa9.73□□□□□ -0.85
VPS13A-203ENST00000360280 CARD14Q9BXL6 1004 aa9.73□□□□□ -0.85
VPS13A-203ENST00000360280 TJP2Q9UDY2 1190 aa9.73□□□□□ -0.85
VPS13A-203ENST00000360280 RPAP1Q9BWH6 1393 aaPredicted RBP9.73□□□□□ -0.85
VPS13A-203ENST00000360280 PRR23AA6NEV1 266 aa9.73□□□□□ -0.85
VPS13A-203ENST00000360280 CUL4AQ13619 759 aa9.73□□□□□ -0.85
VPS13A-203ENST00000360280 ZFRQ96KR1 1074 aaKnown RBP9.73□□□□□ -0.85
VPS13A-203ENST00000360280 XPO6Q96QU8 1125 aaKnown RBP9.73□□□□□ -0.85
VPS13A-203ENST00000360280 POLBP06746 335 aa9.72□□□□□ -0.85
VPS13A-203ENST00000360280 FLT3P36888 993 aa9.72□□□□□ -0.85
VPS13A-203ENST00000360280 GUCA1AP43080 201 aaPredicted RBP9.72□□□□□ -0.85
VPS13A-203ENST00000360280 CENPAP49450 140 aa9.72□□□□□ -0.85
VPS13A-203ENST00000360280 TRIM65Q6PJ69 517 aa9.72□□□□□ -0.85
VPS13A-203ENST00000360280 RBM15Q96T37 977 aaKnown RBP eCLIP9.72□□□□□ -0.85
VPS13A-203ENST00000360280 BHMT2Q9H2M3 363 aa9.72□□□□□ -0.85
VPS13A-203ENST00000360280 EIF2B2P49770 351 aaKnown RBP9.72□□□□□ -0.85
VPS13A-203ENST00000360280 NLRP10Q86W26 655 aa9.72□□□□□ -0.85
VPS13A-203ENST00000360280 HEATR4Q86WZ0 1026 aa9.72□□□□□ -0.85
VPS13A-203ENST00000360280 MLPHQ9BV36 600 aaPredicted RBP9.72□□□□□ -0.85
VPS13A-203ENST00000360280 DHX35Q9H5Z1 703 aaKnown RBP9.72□□□□□ -0.85
VPS13A-203ENST00000360280 LATS2Q9NRM7 1088 aa9.72□□□□□ -0.85
VPS13A-203ENST00000360280 BTG4Q9NY30 223 aa9.72□□□□□ -0.85
VPS13A-203ENST00000360280 ENOPH1Q9UHY7 261 aa9.72□□□□□ -0.85
VPS13A-203ENST00000360280 XPO7Q9UIA9 1087 aaKnown RBP9.72□□□□□ -0.85
VPS13A-203ENST00000360280 NCAPD2Q15021 1401 aa9.72□□□□□ -0.85
VPS13A-203ENST00000360280 PHF2O75151 1096 aa9.72□□□□□ -0.85
VPS13A-203ENST00000360280 SERPIND1P05546 499 aa9.72□□□□□ -0.85
VPS13A-203ENST00000360280 NPEPPSP55786 919 aa9.72□□□□□ -0.85
VPS13A-203ENST00000360280 BTKQ06187 659 aa9.72□□□□□ -0.85
VPS13A-203ENST00000360280 FBXO31Q5XUX0 539 aaPredicted RBP9.72□□□□□ -0.85
VPS13A-203ENST00000360280 ANKRD40Q6AI12 368 aa9.72□□□□□ -0.85
VPS13A-203ENST00000360280 ZBTB10Q96DT7 871 aa9.72□□□□□ -0.85
VPS13A-203ENST00000360280 CD274Q9NZQ7 290 aa9.72□□□□□ -0.85
VPS13A-203ENST00000360280 PLEKHG1Q9ULL1 1385 aa9.72□□□□□ -0.85
VPS13A-203ENST00000360280 PSTPIP1O43586 416 aa9.72□□□□□ -0.85
VPS13A-203ENST00000360280 SPANXN2Q5MJ10 180 aa9.72□□□□□ -0.85
VPS13A-203ENST00000360280 PMF1Q6P1K2 205 aa9.72□□□□□ -0.85
VPS13A-203ENST00000360280 GAS2L3Q86XJ1 694 aa9.72□□□□□ -0.85
VPS13A-203ENST00000360280 STK36Q9NRP7 1315 aa9.72□□□□□ -0.85
VPS13A-203ENST00000360280 AIM2O14862 343 aa9.72□□□□□ -0.85
VPS13A-203ENST00000360280 ZNF862O60290 1169 aa9.72□□□□□ -0.85
VPS13A-203ENST00000360280 ENKURQ8TC29 256 aa9.72□□□□□ -0.85
VPS13A-203ENST00000360280 RASGRP4Q8TDF6 673 aa9.72□□□□□ -0.85
VPS13A-203ENST00000360280 PPP1R14AQ96A00 147 aa9.72□□□□□ -0.85
VPS13A-203ENST00000360280 TSR3Q9UJK0 312 aaKnown RBP9.72□□□□□ -0.85
VPS13A-203ENST00000360280 SLC27A3Q5K4L6 730 aa9.72□□□□□ -0.85
VPS13A-203ENST00000360280 STAP2Q9UGK3 403 aa9.72□□□□□ -0.85
VPS13A-203ENST00000360280 FAM25AB3EWG3 89 aa9.72□□□□□ -0.85
VPS13A-203ENST00000360280 FAM25CB3EWG5 89 aa9.72□□□□□ -0.85
VPS13A-203ENST00000360280 FAM25GB3EWG6 89 aa9.72□□□□□ -0.85
VPS13A-203ENST00000360280 RGS2P41220 211 aa9.72□□□□□ -0.85
VPS13A-203ENST00000360280 CTTNQ14247 550 aaKnown RBP9.72□□□□□ -0.85
VPS13A-203ENST00000360280 PTPN21Q16825 1174 aa9.72□□□□□ -0.85
VPS13A-203ENST00000360280 COBLL1Q53SF7 1204 aa9.72□□□□□ -0.85
VPS13A-203ENST00000360280 SPRP35270 261 aaPredicted RBP9.72□□□□□ -0.85
VPS13A-203ENST00000360280 FAM83EQ2M2I3 478 aa9.72□□□□□ -0.85
VPS13A-203ENST00000360280 SHCBP1Q8NEM2 672 aa9.72□□□□□ -0.85
VPS13A-203ENST00000360280 ATP8B4Q8TF62 1192 aa9.72□□□□□ -0.85
VPS13A-203ENST00000360280 UNC13AQ9UPW8 1703 aa9.72□□□□□ -0.85
VPS13A-203ENST00000360280 RSBN1Q5VWQ0 802 aaPredicted RBP9.72□□□□□ -0.85
VPS13A-203ENST00000360280 KLHL17Q6TDP4 642 aa9.72□□□□□ -0.85
VPS13A-203ENST00000360280 CENPTQ96BT3 561 aa9.72□□□□□ -0.85
VPS13A-203ENST00000360280 C11orf70Q9BRQ4 267 aa9.72□□□□□ -0.85
VPS13A-203ENST00000360280 HDHD2Q9H0R4 259 aa9.72□□□□□ -0.85
VPS13A-203ENST00000360280 OSBPL5Q9H0X9 879 aaPredicted RBP9.72□□□□□ -0.85
VPS13A-203ENST00000360280 MYO3BQ8WXR4 1341 aa9.72□□□□□ -0.85
VPS13A-203ENST00000360280 DENND3A2RUS2 1198 aa9.72□□□□□ -0.85
VPS13A-203ENST00000360280 M0QYV0 167 aa9.72□□□□□ -0.85
VPS13A-203ENST00000360280 MAGEA10P43363 369 aaPredicted RBP9.72□□□□□ -0.85
VPS13A-203ENST00000360280 AVENQ9NQS1 362 aaPredicted RBP9.72□□□□□ -0.85
VPS13A-203ENST00000360280 POLIQ9UNA4 740 aa9.72□□□□□ -0.85
VPS13A-203ENST00000360280 ATP1A3P13637 1013 aa9.72□□□□□ -0.85
VPS13A-203ENST00000360280 ATP12AP54707 1039 aa9.72□□□□□ -0.85
VPS13A-203ENST00000360280 ALDH6A1Q02252 535 aaKnown RBP9.72□□□□□ -0.85
VPS13A-203ENST00000360280 DENND6AQ8IWF6 608 aa9.72□□□□□ -0.85
VPS13A-203ENST00000360280 ADGRA2Q96PE1 1338 aa9.72□□□□□ -0.85
VPS13A-203ENST00000360280 FAM83BQ5T0W9 1011 aa9.72□□□□□ -0.85
VPS13A-203ENST00000360280 PPP1R18Q6NYC8 613 aa9.72□□□□□ -0.85
VPS13A-203ENST00000360280 SCN4BQ8IWT1 228 aa9.72□□□□□ -0.85
VPS13A-203ENST00000360280 SNX31Q8N9S9 440 aa9.72□□□□□ -0.85
VPS13A-203ENST00000360280 PNMA3Q9UL41 463 aa9.72□□□□□ -0.85
VPS13A-203ENST00000360280 ERVV-2B6SEH9 535 aa9.71□□□□□ -0.85
VPS13A-203ENST00000360280 PGK2P07205 417 aa9.71□□□□□ -0.85
VPS13A-203ENST00000360280 ABCB1P08183 1280 aaPredicted RBP9.71□□□□□ -0.85
VPS13A-203ENST00000360280 PTK7Q13308 1070 aa9.71□□□□□ -0.85
VPS13A-203ENST00000360280 LRRC24Q50LG9 513 aa9.71□□□□□ -0.85
VPS13A-203ENST00000360280 ELMO2Q96JJ3 720 aa9.71□□□□□ -0.85
VPS13A-203ENST00000360280 MANSC1Q9H8J5 431 aa9.71□□□□□ -0.85
VPS13A-203ENST00000360280 HERC5Q9UII4 1024 aaKnown RBP9.71□□□□□ -0.85
VPS13A-203ENST00000360280 FYNP06241 537 aa9.71□□□□□ -0.85
VPS13A-203ENST00000360280 ITIH2P19823 946 aa9.71□□□□□ -0.85
VPS13A-203ENST00000360280 TCN1P20061 433 aaPredicted RBP9.71□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms