RNA–Protein interactions for RNA: ENST00000358763.6

SYN3-202, Transcript of synapsin III, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SYN3, Length 3,126 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-202ENST00000358763 NIF3L1Q9GZT8 377 aa12.84□□□□□ -0.35
SYN3-202ENST00000358763 ATMINO43313 823 aaPredicted RBP12.83□□□□□ -0.36
SYN3-202ENST00000358763 TADA3O75528 432 aa12.83□□□□□ -0.36
SYN3-202ENST00000358763 WEE2P0C1S8 567 aa12.83□□□□□ -0.36
SYN3-202ENST00000358763 CXCR5P32302 372 aa12.83□□□□□ -0.36
SYN3-202ENST00000358763 ZNF394Q53GI3 561 aa12.83□□□□□ -0.36
SYN3-202ENST00000358763 TAF2Q6P1X5 1199 aa12.83□□□□□ -0.36
SYN3-202ENST00000358763 KIF12Q96FN5 646 aa12.83□□□□□ -0.36
SYN3-202ENST00000358763 TSKSQ9UJT2 592 aa12.83□□□□□ -0.36
SYN3-202ENST00000358763 PCDHGC5Q9Y5F6 944 aa12.83□□□□□ -0.36
SYN3-202ENST00000358763 TRIP11Q15643 1979 aa12.83□□□□□ -0.36
SYN3-202ENST00000358763 BTNL10A8MVZ5 291 aa12.83□□□□□ -0.36
SYN3-202ENST00000358763 TMEM253P0C7T8 217 aa12.83□□□□□ -0.36
SYN3-202ENST00000358763 RAP1GAPP47736 663 aa12.83□□□□□ -0.36
SYN3-202ENST00000358763 CRYBB1P53674 252 aaPredicted RBP12.83□□□□□ -0.36
SYN3-202ENST00000358763 GLRA4Q5JXX5 417 aa12.83□□□□□ -0.36
SYN3-202ENST00000358763 KLHDC9Q8NEP7 349 aa12.83□□□□□ -0.36
SYN3-202ENST00000358763 ASB7Q9H672 318 aa12.83□□□□□ -0.36
SYN3-202ENST00000358763 INTUQ9ULD6 942 aa12.83□□□□□ -0.36
SYN3-202ENST00000358763 CDY2AQ9Y6F7 541 aa12.83□□□□□ -0.36
SYN3-202ENST00000358763 CFHP08603 1231 aa12.82□□□□□ -0.36
SYN3-202ENST00000358763 AKAP5P24588 427 aa12.82□□□□□ -0.36
SYN3-202ENST00000358763 POLR2BP30876 1174 aaKnown RBP12.82□□□□□ -0.36
SYN3-202ENST00000358763 MRPS6P82932 125 aaKnown RBP12.82□□□□□ -0.36
SYN3-202ENST00000358763 KYAT1Q16773 422 aa12.82□□□□□ -0.36
SYN3-202ENST00000358763 TEX35Q5T0J7 233 aa12.82□□□□□ -0.36
SYN3-202ENST00000358763 MAP3K21Q5TCX8 1036 aa12.82□□□□□ -0.36
SYN3-202ENST00000358763 PASD1Q8IV76 773 aa12.82□□□□□ -0.36
SYN3-202ENST00000358763 TLR10Q9BXR5 811 aa12.82□□□□□ -0.36
SYN3-202ENST00000358763 CELF4Q9BZC1 486 aaKnown RBP12.82□□□□□ -0.36
SYN3-202ENST00000358763 DDX20Q9UHI6 824 aaKnown RBP12.82□□□□□ -0.36
SYN3-202ENST00000358763 SNX12Q9UMY4 172 aa12.82□□□□□ -0.36
SYN3-202ENST00000358763 PCDHB2Q9Y5E7 798 aa12.82□□□□□ -0.36
SYN3-202ENST00000358763 ANKRD62A6NC57 917 aa12.82□□□□□ -0.36
SYN3-202ENST00000358763 GNA15P30679 374 aa12.82□□□□□ -0.36
SYN3-202ENST00000358763 ASPAP45381 313 aa12.82□□□□□ -0.36
SYN3-202ENST00000358763 CCSAPQ6IQ19 270 aaPredicted RBP12.82□□□□□ -0.36
SYN3-202ENST00000358763 FAM228AQ86W67 206 aa12.82□□□□□ -0.36
SYN3-202ENST00000358763 NME8Q8N427 588 aa12.82□□□□□ -0.36
SYN3-202ENST00000358763 TPCN2Q8NHX9 752 aa12.82□□□□□ -0.36
SYN3-202ENST00000358763 SLC35G2Q8TBE7 412 aa12.82□□□□□ -0.36
SYN3-202ENST00000358763 ZNF296Q8WUU4 475 aaPredicted RBP12.82□□□□□ -0.36
SYN3-202ENST00000358763 RFFLQ8WZ73 363 aa12.82□□□□□ -0.36
SYN3-202ENST00000358763 ISCUQ9H1K1 167 aa12.82□□□□□ -0.36
SYN3-202ENST00000358763 CISHQ9NSE2 258 aa12.82□□□□□ -0.36
SYN3-202ENST00000358763 NOC2LQ9Y3T9 749 aaKnown RBP12.82□□□□□ -0.36
SYN3-202ENST00000358763 GRIN2DO15399 1336 aa12.82□□□□□ -0.36
SYN3-202ENST00000358763 RTN2O75298 545 aa12.82□□□□□ -0.36
SYN3-202ENST00000358763 RECQL4O94761 1208 aa12.82□□□□□ -0.36
SYN3-202ENST00000358763 WHAMMP3Q1A5X7 153 aa12.82□□□□□ -0.36
SYN3-202ENST00000358763 WDR72Q3MJ13 1102 aa12.82□□□□□ -0.36
SYN3-202ENST00000358763 COG1Q8WTW3 980 aa12.82□□□□□ -0.36
SYN3-202ENST00000358763 ZMAT2Q96NC0 199 aaKnown RBP12.82□□□□□ -0.36
SYN3-202ENST00000358763 PDCL3Q9H2J4 239 aa12.82□□□□□ -0.36
SYN3-202ENST00000358763 KLK14Q9P0G3 267 aa12.82□□□□□ -0.36
SYN3-202ENST00000358763 NCANO14594 1321 aa12.81□□□□□ -0.36
SYN3-202ENST00000358763 ATP8B3O60423 1300 aa12.81□□□□□ -0.36
SYN3-202ENST00000358763 M0QZ92 97 aa12.81□□□□□ -0.36
SYN3-202ENST00000358763 INHAP05111 366 aa12.81□□□□□ -0.36
SYN3-202ENST00000358763 NKX3-2P78367 333 aa12.81□□□□□ -0.36
SYN3-202ENST00000358763 RBM10P98175 930 aaKnown RBP12.81□□□□□ -0.36
SYN3-202ENST00000358763 ZNF667Q5HYK9 610 aa12.81□□□□□ -0.36
SYN3-202ENST00000358763 APBB1IPQ7Z5R6 666 aaPredicted RBP12.81□□□□□ -0.36
SYN3-202ENST00000358763 UBR7Q8N806 425 aa12.81□□□□□ -0.36
SYN3-202ENST00000358763 CXorf38Q8TB03 319 aa12.81□□□□□ -0.36
SYN3-202ENST00000358763 SNX27Q96L92 541 aa12.81□□□□□ -0.36
SYN3-202ENST00000358763 EPC1Q9H2F5 836 aa12.81□□□□□ -0.36
SYN3-202ENST00000358763 DPP3Q9NY33 737 aa12.81□□□□□ -0.36
SYN3-202ENST00000358763 AGAP1Q9UPQ3 857 aa12.81□□□□□ -0.36
SYN3-202ENST00000358763 HYOU1Q9Y4L1 999 aa12.81□□□□□ -0.36
SYN3-202ENST00000358763 A0A0A6YYK5 440 aaPredicted RBP12.81□□□□□ -0.36
SYN3-202ENST00000358763 THAP12O43422 761 aa12.81□□□□□ -0.36
SYN3-202ENST00000358763 YARSP54577 528 aaKnown RBP12.81□□□□□ -0.36
SYN3-202ENST00000358763 CDH8P55286 799 aa12.81□□□□□ -0.36
SYN3-202ENST00000358763 SERINC5Q86VE9 423 aa12.81□□□□□ -0.36
SYN3-202ENST00000358763 ZNF710Q8N1W2 664 aa12.81□□□□□ -0.36
SYN3-202ENST00000358763 UBXN4Q92575 508 aa12.81□□□□□ -0.36
SYN3-202ENST00000358763 OSBPL9Q96SU4 736 aa12.81□□□□□ -0.36
SYN3-202ENST00000358763 RNF39Q9H2S5 420 aa12.81□□□□□ -0.36
SYN3-202ENST00000358763 SMYD3Q9H7B4 428 aa12.81□□□□□ -0.36
SYN3-202ENST00000358763 SMARCAL1Q9NZC9 954 aa12.81□□□□□ -0.36
SYN3-202ENST00000358763 EHD2Q9NZN4 543 aa12.81□□□□□ -0.36
SYN3-202ENST00000358763 COG5Q9UP83 839 aa12.81□□□□□ -0.36
SYN3-202ENST00000358763 TRPV2Q9Y5S1 764 aa12.81□□□□□ -0.36
SYN3-202ENST00000358763 FKTNO75072 461 aa12.8□□□□□ -0.36
SYN3-202ENST00000358763 BPIFB4P59827 614 aa12.8□□□□□ -0.36
SYN3-202ENST00000358763 NFX1Q12986 1120 aaKnown RBP12.8□□□□□ -0.36
SYN3-202ENST00000358763 ORC1Q13415 861 aa12.8□□□□□ -0.36
SYN3-202ENST00000358763 TUBB2AQ13885 445 aa12.8□□□□□ -0.36
SYN3-202ENST00000358763 PCBP1Q15365 356 aaKnown RBP eCLIP12.8□□□□□ -0.36
SYN3-202ENST00000358763 IFI16Q16666 785 aaKnown RBP12.8□□□□□ -0.36
SYN3-202ENST00000358763 CLEC16AQ2KHT3 1053 aa12.8□□□□□ -0.36
SYN3-202ENST00000358763 C2CD6Q53TS8 623 aa12.8□□□□□ -0.36
SYN3-202ENST00000358763 UBXN11Q5T124 520 aa12.8□□□□□ -0.36
SYN3-202ENST00000358763 TWF2Q6IBS0 349 aaKnown RBP12.8□□□□□ -0.36
SYN3-202ENST00000358763 CEP112Q8N8E3 955 aa12.8□□□□□ -0.36
SYN3-202ENST00000358763 LRRC57Q8N9N7 239 aa12.8□□□□□ -0.36
SYN3-202ENST00000358763 CAGE1Q8TC20 777 aa12.8□□□□□ -0.36
SYN3-202ENST00000358763 CPA5Q8WXQ8 436 aa12.8□□□□□ -0.36
SYN3-202ENST00000358763 MMS19Q96T76 1030 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms