RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 CDC26Q8NHZ8 85 aa9.19□□□□□ -0.94
COL6A6-201ENST00000358511 STRBPQ96SI9 672 aaKnown RBP9.19□□□□□ -0.94
COL6A6-201ENST00000358511 C7orf25Q9BPX7 421 aa9.19□□□□□ -0.94
COL6A6-201ENST00000358511 INTS2Q9H0H0 1204 aaKnown RBP9.19□□□□□ -0.94
COL6A6-201ENST00000358511 BFARQ9NZS9 450 aa9.19□□□□□ -0.94
COL6A6-201ENST00000358511 TBKBP1A7MCY6 615 aa9.19□□□□□ -0.94
COL6A6-201ENST00000358511 LDHAP00338 332 aaKnown RBP9.19□□□□□ -0.94
COL6A6-201ENST00000358511 TRIM49P0CI25 452 aa9.19□□□□□ -0.94
COL6A6-201ENST00000358511 TRIM49CP0CI26 452 aa9.19□□□□□ -0.94
COL6A6-201ENST00000358511 RFC5P40937 340 aa9.19□□□□□ -0.94
COL6A6-201ENST00000358511 GALCP54803 685 aa9.19□□□□□ -0.94
COL6A6-201ENST00000358511 BCAR1P56945 870 aa9.19□□□□□ -0.94
COL6A6-201ENST00000358511 ATP1A4Q13733 1029 aa9.19□□□□□ -0.94
COL6A6-201ENST00000358511 DGKHQ86XP1 1220 aa9.19□□□□□ -0.94
COL6A6-201ENST00000358511 TPCN2Q8NHX9 752 aa9.19□□□□□ -0.94
COL6A6-201ENST00000358511 AENQ8WTP8 325 aaKnown RBP9.19□□□□□ -0.94
COL6A6-201ENST00000358511 AGBL1Q96MI9 1066 aa9.19□□□□□ -0.94
COL6A6-201ENST00000358511 ARHGEF37A1IGU5 675 aa9.19□□□□□ -0.94
COL6A6-201ENST00000358511 ALAS1P13196 640 aa9.19□□□□□ -0.94
COL6A6-201ENST00000358511 KCNQ4P56696 695 aa9.19□□□□□ -0.94
COL6A6-201ENST00000358511 RPS6P62753 249 aaKnown RBP9.19□□□□□ -0.94
COL6A6-201ENST00000358511 MICU2Q8IYU8 434 aa9.19□□□□□ -0.94
COL6A6-201ENST00000358511 MSL3Q8N5Y2 521 aaKnown RBP9.19□□□□□ -0.94
COL6A6-201ENST00000358511 ENGASEQ8NFI3 743 aa9.19□□□□□ -0.94
COL6A6-201ENST00000358511 ACTRT1Q8TDG2 376 aa9.19□□□□□ -0.94
COL6A6-201ENST00000358511 ARHGEF26Q96DR7 871 aa9.19□□□□□ -0.94
COL6A6-201ENST00000358511 OMA1Q96E52 524 aa9.19□□□□□ -0.94
COL6A6-201ENST00000358511 F8W8V4 182 aa9.19□□□□□ -0.94
COL6A6-201ENST00000358511 CENPCQ03188 943 aa9.19□□□□□ -0.94
COL6A6-201ENST00000358511 ZNF699Q32M78 642 aa9.19□□□□□ -0.94
COL6A6-201ENST00000358511 ZNF507Q8TCN5 953 aa9.19□□□□□ -0.94
COL6A6-201ENST00000358511 GLMNQ92990 594 aa9.19□□□□□ -0.94
COL6A6-201ENST00000358511 MMADHCQ9H3L0 296 aaPredicted RBP9.19□□□□□ -0.94
COL6A6-201ENST00000358511 LRRC4Q9HBW1 653 aa9.19□□□□□ -0.94
COL6A6-201ENST00000358511 HEY2Q9UBP5 337 aa9.19□□□□□ -0.94
COL6A6-201ENST00000358511 SLC12A6Q9UHW9 1150 aa9.19□□□□□ -0.94
COL6A6-201ENST00000358511 WDR17Q8IZU2 1322 aa9.19□□□□□ -0.94
COL6A6-201ENST00000358511 TULP2O00295 520 aa9.19□□□□□ -0.94
COL6A6-201ENST00000358511 EFCAB14O75071 495 aa9.19□□□□□ -0.94
COL6A6-201ENST00000358511 SRP72O76094 671 aaKnown RBP9.19□□□□□ -0.94
COL6A6-201ENST00000358511 CPA2P48052 419 aa9.19□□□□□ -0.94
COL6A6-201ENST00000358511 CSTF3Q12996 717 aaKnown RBP9.19□□□□□ -0.94
COL6A6-201ENST00000358511 OR6B2Q6IFH4 312 aa9.19□□□□□ -0.94
COL6A6-201ENST00000358511 MTDHQ86UE4 582 aaKnown RBP9.19□□□□□ -0.94
COL6A6-201ENST00000358511 SENP7Q9BQF6 1050 aa9.19□□□□□ -0.94
COL6A6-201ENST00000358511 ZNF804BA4D1E1 1349 aa9.19□□□□□ -0.94
COL6A6-201ENST00000358511 NEMP1O14524 444 aa9.19□□□□□ -0.94
COL6A6-201ENST00000358511 ABLIM1O14639 778 aa9.19□□□□□ -0.94
COL6A6-201ENST00000358511 TCN1P20061 433 aaPredicted RBP9.19□□□□□ -0.94
COL6A6-201ENST00000358511 ARMCX4Q5H9R4 360 aa9.19□□□□□ -0.94
COL6A6-201ENST00000358511 COA7Q96BR5 231 aa9.19□□□□□ -0.94
COL6A6-201ENST00000358511 C9orf72Q96LT7 481 aa9.19□□□□□ -0.94
COL6A6-201ENST00000358511 FUCA2Q9BTY2 467 aa9.19□□□□□ -0.94
COL6A6-201ENST00000358511 DDX18Q9NVP1 670 aaKnown RBP9.19□□□□□ -0.94
COL6A6-201ENST00000358511 ATP8B3O60423 1300 aa9.19□□□□□ -0.94
COL6A6-201ENST00000358511 POTECB2RU33 542 aa9.19□□□□□ -0.94
COL6A6-201ENST00000358511 BCL10O95999 233 aa9.19□□□□□ -0.94
COL6A6-201ENST00000358511 SNRPAP09012 282 aaKnown RBP9.19□□□□□ -0.94
COL6A6-201ENST00000358511 CHI3L2Q15782 390 aa9.19□□□□□ -0.94
COL6A6-201ENST00000358511 ATXN2LQ8WWM7 1075 aaKnown RBP9.19□□□□□ -0.94
COL6A6-201ENST00000358511 E2F7Q96AV8 911 aa9.19□□□□□ -0.94
COL6A6-201ENST00000358511 BBS2Q9BXC9 721 aa9.19□□□□□ -0.94
COL6A6-201ENST00000358511 ZNF408Q9H9D4 720 aa9.19□□□□□ -0.94
COL6A6-201ENST00000358511 PLAGL2Q9UPG8 496 aa9.19□□□□□ -0.94
COL6A6-201ENST00000358511 EIF3EP60228 445 aaKnown RBP9.19□□□□□ -0.94
COL6A6-201ENST00000358511 SNX30Q5VWJ9 437 aa9.19□□□□□ -0.94
COL6A6-201ENST00000358511 OLFML1Q6UWY5 402 aa9.19□□□□□ -0.94
COL6A6-201ENST00000358511 IQSEC2Q5JU85 1478 aa9.18□□□□□ -0.94
COL6A6-201ENST00000358511 PDXKO00764 312 aa9.18□□□□□ -0.94
COL6A6-201ENST00000358511 PPIDQ08752 370 aaKnown RBP9.18□□□□□ -0.94
COL6A6-201ENST00000358511 RASA2Q15283 850 aa9.18□□□□□ -0.94
COL6A6-201ENST00000358511 FAM47CQ5HY64 1035 aa9.18□□□□□ -0.94
COL6A6-201ENST00000358511 MTHFD1LQ6UB35 978 aa9.18□□□□□ -0.94
COL6A6-201ENST00000358511 PI16Q6UXB8 463 aa9.18□□□□□ -0.94
COL6A6-201ENST00000358511 TRIM69Q86WT6 500 aa9.18□□□□□ -0.94
COL6A6-201ENST00000358511 KANSL2Q9H9L4 492 aa9.18□□□□□ -0.94
COL6A6-201ENST00000358511 ZNF609O15014 1411 aa9.18□□□□□ -0.94
COL6A6-201ENST00000358511 SRRM3A6NNA2 597 aaPredicted RBP9.18□□□□□ -0.94
COL6A6-201ENST00000358511 AP3B1O00203 1094 aa9.18□□□□□ -0.94
COL6A6-201ENST00000358511 MAP2K7O14733 419 aa9.18□□□□□ -0.94
COL6A6-201ENST00000358511 ALDH5A1P51649 535 aaPredicted RBP9.18□□□□□ -0.94
COL6A6-201ENST00000358511 CCDC142Q17RM4 750 aa9.18□□□□□ -0.94
COL6A6-201ENST00000358511 PLEKHM3Q6ZWE6 761 aa9.18□□□□□ -0.94
COL6A6-201ENST00000358511 NANOGNBQ7Z5D8 188 aa9.18□□□□□ -0.94
COL6A6-201ENST00000358511 CD209Q9NNX6 404 aa9.18□□□□□ -0.94
COL6A6-201ENST00000358511 HSPBP1Q9NZL4 362 aa9.18□□□□□ -0.94
COL6A6-201ENST00000358511 TAGLN3Q9UI15 199 aa9.18□□□□□ -0.94
COL6A6-201ENST00000358511 ANKARQ7Z5J8 1434 aa9.18□□□□□ -0.94
COL6A6-201ENST00000358511 EMSYQ7Z589 1322 aa9.18□□□□□ -0.94
COL6A6-201ENST00000358511 ELF3P78545 371 aaPredicted RBP9.18□□□□□ -0.94
COL6A6-201ENST00000358511 TRIM25Q14258 630 aaKnown RBP9.18□□□□□ -0.94
COL6A6-201ENST00000358511 KBTBD12Q3ZCT8 623 aa9.18□□□□□ -0.94
COL6A6-201ENST00000358511 ARID3BQ8IVW6 561 aaPredicted RBP9.18□□□□□ -0.94
COL6A6-201ENST00000358511 OTUB1Q96FW1 271 aaPredicted RBP9.18□□□□□ -0.94
COL6A6-201ENST00000358511 RNPEPL1Q9HAU8 725 aa9.18□□□□□ -0.94
COL6A6-201ENST00000358511 ZNF212Q9UDV6 495 aa9.18□□□□□ -0.94
COL6A6-201ENST00000358511 SERPINB13Q9UIV8 391 aa9.18□□□□□ -0.94
COL6A6-201ENST00000358511 POTEFA5A3E0 1075 aa9.18□□□□□ -0.94
COL6A6-201ENST00000358511 DNALI1O14645 258 aaPredicted RBP9.18□□□□□ -0.94
COL6A6-201ENST00000358511 KCNN4O15554 427 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms