RNA–Protein interactions for RNA: ENST00000358025.7

SYNE2-204, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE2, Length 21,842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-204ENST00000358025 XAB2Q9HCS7 855 aaKnown RBP4.33□□□□□ -1.72
SYNE2-204ENST00000358025 TMEM45AQ9NWC5 275 aa4.33□□□□□ -1.72
SYNE2-204ENST00000358025 APPL1Q9UKG1 709 aa4.33□□□□□ -1.72
SYNE2-204ENST00000358025 ALOX5P09917 674 aa4.33□□□□□ -1.72
SYNE2-204ENST00000358025 DDX5P17844 614 aaKnown RBP4.33□□□□□ -1.72
SYNE2-204ENST00000358025 GSTT1P30711 240 aa4.33□□□□□ -1.72
SYNE2-204ENST00000358025 CCT7Q99832 543 aa4.33□□□□□ -1.72
SYNE2-204ENST00000358025 TAGLN3Q9UI15 199 aa4.33□□□□□ -1.72
SYNE2-204ENST00000358025 RCN1Q15293 331 aa4.33□□□□□ -1.72
SYNE2-204ENST00000358025 NIPA1Q7RTP0 329 aa4.33□□□□□ -1.72
SYNE2-204ENST00000358025 IRF2BP1Q8IU81 584 aa4.33□□□□□ -1.72
SYNE2-204ENST00000358025 BIRC8Q96P09 236 aa4.33□□□□□ -1.72
SYNE2-204ENST00000358025 ASB2Q96Q27 587 aa4.33□□□□□ -1.72
SYNE2-204ENST00000358025 HOXC6P09630 235 aa4.32□□□□□ -1.72
SYNE2-204ENST00000358025 KRT17Q04695 432 aa4.32□□□□□ -1.72
SYNE2-204ENST00000358025 FBXO33Q7Z6M2 555 aa4.32□□□□□ -1.72
SYNE2-204ENST00000358025 CD248Q9HCU0 757 aa4.32□□□□□ -1.72
SYNE2-204ENST00000358025 GIN1Q9NXP7 522 aa4.32□□□□□ -1.72
SYNE2-204ENST00000358025 KCTD6Q8NC69 237 aa4.32□□□□□ -1.72
SYNE2-204ENST00000358025 MGARPQ8TDB4 240 aa4.32□□□□□ -1.72
SYNE2-204ENST00000358025 C1orf21Q9H246 121 aa4.32□□□□□ -1.72
SYNE2-204ENST00000358025 EPB41L1Q9H4G0 881 aa4.32□□□□□ -1.72
SYNE2-204ENST00000358025 MOV10Q9HCE1 1003 aaKnown RBP4.32□□□□□ -1.72
SYNE2-204ENST00000358025 HMG20AQ9NP66 347 aa4.32□□□□□ -1.72
SYNE2-204ENST00000358025 DKK3Q9UBP4 350 aa4.32□□□□□ -1.72
SYNE2-204ENST00000358025 BIN2Q9UBW5 565 aaPredicted RBP4.32□□□□□ -1.72
SYNE2-204ENST00000358025 USP20Q9Y2K6 914 aa4.32□□□□□ -1.72
SYNE2-204ENST00000358025 ATXN8OSP0DMR3 200 aa4.32□□□□□ -1.72
SYNE2-204ENST00000358025 PLS3P13797 630 aa4.32□□□□□ -1.72
SYNE2-204ENST00000358025 MAP3K10Q02779 954 aa4.32□□□□□ -1.72
SYNE2-204ENST00000358025 KIF22Q14807 665 aa4.32□□□□□ -1.72
SYNE2-204ENST00000358025 FAM160B2Q86V87 743 aa4.32□□□□□ -1.72
SYNE2-204ENST00000358025 GOLM1Q8NBJ4 401 aa4.32□□□□□ -1.72
SYNE2-204ENST00000358025 KBTBD13C9JR72 458 aa4.32□□□□□ -1.72
SYNE2-204ENST00000358025 ADORA1P30542 326 aa4.32□□□□□ -1.72
SYNE2-204ENST00000358025 RANBP1P43487 201 aa4.32□□□□□ -1.72
SYNE2-204ENST00000358025 MXI1P50539 228 aa4.32□□□□□ -1.72
SYNE2-204ENST00000358025 ARHGDIAP52565 204 aa4.32□□□□□ -1.72
SYNE2-204ENST00000358025 DLG4P78352 724 aa4.32□□□□□ -1.72
SYNE2-204ENST00000358025 PRR16Q569H4 304 aa4.32□□□□□ -1.72
SYNE2-204ENST00000358025 MIGA1Q8NAN2 632 aa4.32□□□□□ -1.72
SYNE2-204ENST00000358025 NKD2Q969F2 451 aaPredicted RBP4.32□□□□□ -1.72
SYNE2-204ENST00000358025 FAM189A1O60320 539 aa4.32□□□□□ -1.72
SYNE2-204ENST00000358025 SORBS3O60504 671 aa4.32□□□□□ -1.72
SYNE2-204ENST00000358025 PRIM2P49643 509 aa4.32□□□□□ -1.72
SYNE2-204ENST00000358025 WASHC5Q12768 1159 aa4.32□□□□□ -1.72
SYNE2-204ENST00000358025 DPYSQ14117 519 aa4.32□□□□□ -1.72
SYNE2-204ENST00000358025 SLC15A2Q16348 729 aa4.32□□□□□ -1.72
SYNE2-204ENST00000358025 TCHHL1Q5QJ38 904 aaPredicted RBP4.32□□□□□ -1.72
SYNE2-204ENST00000358025 EFHD2Q96C19 240 aaPredicted RBP4.32□□□□□ -1.72
SYNE2-204ENST00000358025 NUP85Q9BW27 656 aa4.32□□□□□ -1.72
SYNE2-204ENST00000358025 MLXIPQ9HAP2 919 aa4.32□□□□□ -1.72
SYNE2-204ENST00000358025 DNAJC17Q9NVM6 304 aaKnown RBP4.32□□□□□ -1.72
SYNE2-204ENST00000358025 CYP3A7-CYP3A51PA0A087WV96 503 aa4.32□□□□□ -1.72
SYNE2-204ENST00000358025 VPS4BO75351 444 aa4.32□□□□□ -1.72
SYNE2-204ENST00000358025 FKBP9O95302 570 aa4.32□□□□□ -1.72
SYNE2-204ENST00000358025 CYP3A7P24462 503 aa4.32□□□□□ -1.72
SYNE2-204ENST00000358025 ADCY4Q8NFM4 1077 aa4.32□□□□□ -1.72
SYNE2-204ENST00000358025 RDH11Q8TC12 318 aa4.32□□□□□ -1.72
SYNE2-204ENST00000358025 TUBA1CQ9BQE3 449 aa4.32□□□□□ -1.72
SYNE2-204ENST00000358025 ZSWIM1Q9BR11 485 aa4.32□□□□□ -1.72
SYNE2-204ENST00000358025 SUGCTQ9HAC7 445 aa4.32□□□□□ -1.72
SYNE2-204ENST00000358025 SLC24A3Q9HC58 644 aa4.32□□□□□ -1.72
SYNE2-204ENST00000358025 PPARGC1AQ9UBK2 798 aaKnown RBP4.32□□□□□ -1.72
SYNE2-204ENST00000358025 ANKRD26Q9UPS8 1709 aa4.32□□□□□ -1.72
SYNE2-204ENST00000358025 CCDC189A1A4V9 331 aa4.32□□□□□ -1.72
SYNE2-204ENST00000358025 SF3B3Q15393 1217 aaKnown RBP4.32□□□□□ -1.72
SYNE2-204ENST00000358025 PPIL6Q8IXY8 311 aa4.32□□□□□ -1.72
SYNE2-204ENST00000358025 NUP93Q8N1F7 819 aa4.32□□□□□ -1.72
SYNE2-204ENST00000358025 TOP1MTQ969P6 601 aa4.32□□□□□ -1.72
SYNE2-204ENST00000358025 ZC3H13Q5T200 1668 aaKnown RBP4.32□□□□□ -1.72
SYNE2-204ENST00000358025 FAM25AB3EWG3 89 aa4.32□□□□□ -1.72
SYNE2-204ENST00000358025 FAM25CB3EWG5 89 aa4.32□□□□□ -1.72
SYNE2-204ENST00000358025 FAM25GB3EWG6 89 aa4.32□□□□□ -1.72
SYNE2-204ENST00000358025 ITGAVP06756 1048 aa4.32□□□□□ -1.72
SYNE2-204ENST00000358025 THOC5Q13769 683 aaKnown RBP4.32□□□□□ -1.72
SYNE2-204ENST00000358025 C12orf60Q5U649 245 aa4.32□□□□□ -1.72
SYNE2-204ENST00000358025 C15orf52Q6ZUT6 534 aaKnown RBP4.32□□□□□ -1.72
SYNE2-204ENST00000358025 L3MBTL3Q96JM7 780 aaPredicted RBP4.32□□□□□ -1.72
SYNE2-204ENST00000358025 BCL7BQ9BQE9 202 aa4.32□□□□□ -1.72
SYNE2-204ENST00000358025 TBC1D4O60343 1298 aa4.32□□□□□ -1.72
SYNE2-204ENST00000358025 SERPINA6P08185 405 aa4.32□□□□□ -1.72
SYNE2-204ENST00000358025 EP400NLQ6ZTU2 488 aa4.32□□□□□ -1.72
SYNE2-204ENST00000358025 ATP8B4Q8TF62 1192 aa4.32□□□□□ -1.72
SYNE2-204ENST00000358025 GNPTGQ9UJJ9 305 aa4.32□□□□□ -1.72
SYNE2-204ENST00000358025 MROH7Q68CQ1 1323 aa4.32□□□□□ -1.72
SYNE2-204ENST00000358025 MROH1Q8NDA8 1641 aa4.32□□□□□ -1.72
SYNE2-204ENST00000358025 PDE5AO76074 875 aa4.32□□□□□ -1.72
SYNE2-204ENST00000358025 KRT8P05787 483 aa4.32□□□□□ -1.72
SYNE2-204ENST00000358025 SERPINB5P36952 375 aa4.32□□□□□ -1.72
SYNE2-204ENST00000358025 TAF1BQ53T94 588 aaPredicted RBP4.32□□□□□ -1.72
SYNE2-204ENST00000358025 CYS1Q717R9 158 aa4.32□□□□□ -1.72
SYNE2-204ENST00000358025 SMYD4Q8IYR2 804 aaPredicted RBP4.32□□□□□ -1.72
SYNE2-204ENST00000358025 SH2D3CQ8N5H7 860 aa4.32□□□□□ -1.72
SYNE2-204ENST00000358025 NDEL1Q9GZM8 345 aa4.32□□□□□ -1.72
SYNE2-204ENST00000358025 CYP2C9P11712 490 aa4.32□□□□□ -1.72
SYNE2-204ENST00000358025 CDH2P19022 906 aaPredicted RBP4.32□□□□□ -1.72
SYNE2-204ENST00000358025 BMT2Q1RMZ1 405 aa4.32□□□□□ -1.72
SYNE2-204ENST00000358025 MIGA2Q7L4E1 593 aa4.32□□□□□ -1.72
SYNE2-204ENST00000358025 TSPAN17Q96FV3 270 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms