RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 ARHGEF3Q9NR81 526 aa8.74□□□□□ -1.01
CDC42SE1-201ENST00000357235 AAASQ9NRG9 546 aa8.74□□□□□ -1.01
CDC42SE1-201ENST00000357235 LARSQ9P2J5 1176 aaKnown RBP8.74□□□□□ -1.01
CDC42SE1-201ENST00000357235 HAO1Q9UJM8 370 aa8.74□□□□□ -1.01
CDC42SE1-201ENST00000357235 ZMYND8Q9ULU4 1186 aaPredicted RBP8.74□□□□□ -1.01
CDC42SE1-201ENST00000357235 NAALADL1Q9UQQ1 740 aa8.74□□□□□ -1.01
CDC42SE1-201ENST00000357235 EP400Q96L91 3159 aa8.74□□□□□ -1.01
CDC42SE1-201ENST00000357235 WDR91A4D1P6 747 aa8.74□□□□□ -1.01
CDC42SE1-201ENST00000357235 SLC16A4O15374 487 aa8.74□□□□□ -1.01
CDC42SE1-201ENST00000357235 WFS1O76024 890 aa8.74□□□□□ -1.01
CDC42SE1-201ENST00000357235 VIL1P09327 827 aaKnown RBP8.74□□□□□ -1.01
CDC42SE1-201ENST00000357235 CETPP11597 493 aa8.74□□□□□ -1.01
CDC42SE1-201ENST00000357235 GNAZP19086 355 aa8.74□□□□□ -1.01
CDC42SE1-201ENST00000357235 ECE1P42892 770 aa8.74□□□□□ -1.01
CDC42SE1-201ENST00000357235 CRKP46108 304 aa8.74□□□□□ -1.01
CDC42SE1-201ENST00000357235 PRELPP51888 382 aa8.74□□□□□ -1.01
CDC42SE1-201ENST00000357235 PEX3P56589 373 aa8.74□□□□□ -1.01
CDC42SE1-201ENST00000357235 BNIP1Q12981 228 aa8.74□□□□□ -1.01
CDC42SE1-201ENST00000357235 CBWD2Q8IUF1 395 aa8.74□□□□□ -1.01
CDC42SE1-201ENST00000357235 DDX27Q96GQ7 796 aaKnown RBP8.74□□□□□ -1.01
CDC42SE1-201ENST00000357235 SNF8Q96H20 258 aa8.74□□□□□ -1.01
CDC42SE1-201ENST00000357235 SERPINB12Q96P63 405 aa8.74□□□□□ -1.01
CDC42SE1-201ENST00000357235 UNC45AQ9H3U1 944 aa8.74□□□□□ -1.01
CDC42SE1-201ENST00000357235 RNPEPL1Q9HAU8 725 aa8.74□□□□□ -1.01
CDC42SE1-201ENST00000357235 RXFP1Q9HBX9 757 aa8.74□□□□□ -1.01
CDC42SE1-201ENST00000357235 TOPORSQ9NS56 1045 aaPredicted RBP8.74□□□□□ -1.01
CDC42SE1-201ENST00000357235 HSPBP1Q9NZL4 362 aa8.74□□□□□ -1.01
CDC42SE1-201ENST00000357235 SUN2Q9UH99 717 aa8.74□□□□□ -1.01
CDC42SE1-201ENST00000357235 PCDHA3Q9Y5H8 950 aa8.74□□□□□ -1.01
CDC42SE1-201ENST00000357235 BBOX1O75936 387 aa8.73□□□□□ -1.01
CDC42SE1-201ENST00000357235 SERPINB4P48594 390 aa8.73□□□□□ -1.01
CDC42SE1-201ENST00000357235 BPIFB4P59827 614 aa8.73□□□□□ -1.01
CDC42SE1-201ENST00000357235 MUM1Q2TAK8 710 aa8.73□□□□□ -1.01
CDC42SE1-201ENST00000357235 SH2D4BQ5SQS7 431 aa8.73□□□□□ -1.01
CDC42SE1-201ENST00000357235 RC3H1Q5TC82 1133 aaKnown RBP8.73□□□□□ -1.01
CDC42SE1-201ENST00000357235 CYFIP1Q7L576 1253 aa8.73□□□□□ -1.01
CDC42SE1-201ENST00000357235 PASD1Q8IV76 773 aa8.73□□□□□ -1.01
CDC42SE1-201ENST00000357235 LMO3Q8TAP4 145 aa8.73□□□□□ -1.01
CDC42SE1-201ENST00000357235 CRYGNQ8WXF5 182 aa8.73□□□□□ -1.01
CDC42SE1-201ENST00000357235 LZICQ8WZA0 190 aa8.73□□□□□ -1.01
CDC42SE1-201ENST00000357235 IFT43Q96FT9 208 aa8.73□□□□□ -1.01
CDC42SE1-201ENST00000357235 FIZ1Q96SL8 496 aa8.73□□□□□ -1.01
CDC42SE1-201ENST00000357235 ROPN1BQ9BZX4 212 aaPredicted RBP8.73□□□□□ -1.01
CDC42SE1-201ENST00000357235 ROPN1Q9HAT0 212 aaPredicted RBP8.73□□□□□ -1.01
CDC42SE1-201ENST00000357235 SPATA7Q9P0W8 599 aa8.73□□□□□ -1.01
CDC42SE1-201ENST00000357235 PI4KBQ9UBF8 816 aa8.73□□□□□ -1.01
CDC42SE1-201ENST00000357235 NKX1-2Q9UD57 310 aaPredicted RBP8.73□□□□□ -1.01
CDC42SE1-201ENST00000357235 TCEAL9Q9UHQ7 104 aa8.73□□□□□ -1.01
CDC42SE1-201ENST00000357235 PRR12Q9ULL5 1215 aa8.73□□□□□ -1.01
CDC42SE1-201ENST00000357235 PAIP2BQ9ULR5 123 aaKnown RBP8.73□□□□□ -1.01
CDC42SE1-201ENST00000357235 R3HDM2Q9Y2K5 976 aaKnown RBP8.73□□□□□ -1.01
CDC42SE1-201ENST00000357235 IGLV3-22A0A075B6J6 115 aa8.73□□□□□ -1.01
CDC42SE1-201ENST00000357235 EXOC1LA0A1B0GW35 172 aa8.73□□□□□ -1.01
CDC42SE1-201ENST00000357235 IPO5O00410 1097 aaKnown RBP8.73□□□□□ -1.01
CDC42SE1-201ENST00000357235 PPEF1O14829 653 aaPredicted RBP8.73□□□□□ -1.01
CDC42SE1-201ENST00000357235 CYP11B1P15538 503 aa8.73□□□□□ -1.01
CDC42SE1-201ENST00000357235 LMBRD2Q68DH5 695 aaPredicted RBP8.73□□□□□ -1.01
CDC42SE1-201ENST00000357235 ECHDC2Q86YB7 292 aa8.73□□□□□ -1.01
CDC42SE1-201ENST00000357235 SIAH1Q8IUQ4 282 aa8.73□□□□□ -1.01
CDC42SE1-201ENST00000357235 XXYLT1Q8NBI6 393 aa8.73□□□□□ -1.01
CDC42SE1-201ENST00000357235 PHC3Q8NDX5 983 aa8.73□□□□□ -1.01
CDC42SE1-201ENST00000357235 CKAP2Q8WWK9 683 aa8.73□□□□□ -1.01
CDC42SE1-201ENST00000357235 KREMEN1Q96MU8 473 aa8.73□□□□□ -1.01
CDC42SE1-201ENST00000357235 RAB3IPQ96QF0 476 aaPredicted RBP8.73□□□□□ -1.01
CDC42SE1-201ENST00000357235 CCDC77Q9BR77 488 aa8.73□□□□□ -1.01
CDC42SE1-201ENST00000357235 FAM192AQ9GZU8 254 aa8.73□□□□□ -1.01
CDC42SE1-201ENST00000357235 TMEM117Q9H0C3 514 aa8.73□□□□□ -1.01
CDC42SE1-201ENST00000357235 TUFT1Q9NNX1 390 aa8.73□□□□□ -1.01
CDC42SE1-201ENST00000357235 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.73□□□□□ -1.01
CDC42SE1-201ENST00000357235 O00370 1275 aa8.72□□□□□ -1.01
CDC42SE1-201ENST00000357235 GGPS1O95749 300 aa8.72□□□□□ -1.01
CDC42SE1-201ENST00000357235 IFNB1P01574 187 aa8.72□□□□□ -1.01
CDC42SE1-201ENST00000357235 POLR2MP0CAP2 368 aa8.72□□□□□ -1.01
CDC42SE1-201ENST00000357235 RALAP11233 206 aa8.72□□□□□ -1.01
CDC42SE1-201ENST00000357235 CD58P19256 250 aa8.72□□□□□ -1.01
CDC42SE1-201ENST00000357235 RRM1P23921 792 aa8.72□□□□□ -1.01
CDC42SE1-201ENST00000357235 ERFP50548 548 aa8.72□□□□□ -1.01
CDC42SE1-201ENST00000357235 USP46P62068 366 aa8.72□□□□□ -1.01
CDC42SE1-201ENST00000357235 IL9RQ01113 521 aa8.72□□□□□ -1.01
CDC42SE1-201ENST00000357235 FMO1Q01740 532 aa8.72□□□□□ -1.01
CDC42SE1-201ENST00000357235 MGAT5Q09328 741 aa8.72□□□□□ -1.01
CDC42SE1-201ENST00000357235 STRN3Q13033 797 aa8.72□□□□□ -1.01
CDC42SE1-201ENST00000357235 CEP55Q53EZ4 464 aa8.72□□□□□ -1.01
CDC42SE1-201ENST00000357235 FOXB2Q5VYV0 432 aa8.72□□□□□ -1.01
CDC42SE1-201ENST00000357235 MFSD5Q6N075 450 aa8.72□□□□□ -1.01
CDC42SE1-201ENST00000357235 KRT27Q7Z3Y8 459 aa8.72□□□□□ -1.01
CDC42SE1-201ENST00000357235 ARHGAP18Q8N392 663 aa8.72□□□□□ -1.01
CDC42SE1-201ENST00000357235 SEMA4DQ92854 862 aa8.72□□□□□ -1.01
CDC42SE1-201ENST00000357235 HAUS1Q96CS2 278 aa8.72□□□□□ -1.01
CDC42SE1-201ENST00000357235 LRRC37BQ96QE4 947 aa8.72□□□□□ -1.01
CDC42SE1-201ENST00000357235 HERPUD2Q9BSE4 406 aa8.72□□□□□ -1.01
CDC42SE1-201ENST00000357235 COA1Q9GZY4 146 aa8.72□□□□□ -1.01
CDC42SE1-201ENST00000357235 MYLK2Q9H1R3 596 aa8.72□□□□□ -1.01
CDC42SE1-201ENST00000357235 CCDC134Q9H6E4 229 aa8.72□□□□□ -1.01
CDC42SE1-201ENST00000357235 VPS37BQ9H9H4 285 aa8.72□□□□□ -1.01
CDC42SE1-201ENST00000357235 DMAC2Q9NW81 257 aa8.72□□□□□ -1.01
CDC42SE1-201ENST00000357235 NINJ2Q9NZG7 142 aa8.72□□□□□ -1.01
CDC42SE1-201ENST00000357235 SEL1LQ9UBV2 794 aa8.72□□□□□ -1.01
CDC42SE1-201ENST00000357235 WDR37Q9Y2I8 494 aa8.72□□□□□ -1.01
CDC42SE1-201ENST00000357235 STK24Q9Y6E0 443 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms