RNA–Protein interactions for RNA: ENST00000356805.8

SPTBN1-202, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTBN1, Length 8,482 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-202ENST00000356805 FAM196AQ6ZSG2 479 aa12.05□□□□□ -0.48
SPTBN1-202ENST00000356805 KRT77Q7Z794 578 aa12.05□□□□□ -0.48
SPTBN1-202ENST00000356805 TTC39CQ8N584 583 aa12.05□□□□□ -0.48
SPTBN1-202ENST00000356805 PCYOX1LQ8NBM8 494 aa12.05□□□□□ -0.48
SPTBN1-202ENST00000356805 CENPTQ96BT3 561 aa12.05□□□□□ -0.48
SPTBN1-202ENST00000356805 POLD4Q9HCU8 107 aa12.05□□□□□ -0.48
SPTBN1-202ENST00000356805 ARHGEF3Q9NR81 526 aa12.05□□□□□ -0.48
SPTBN1-202ENST00000356805 GH2P01242 217 aa12.05□□□□□ -0.48
SPTBN1-202ENST00000356805 HMBSP08397 361 aa12.05□□□□□ -0.48
SPTBN1-202ENST00000356805 CDH6P55285 790 aa12.05□□□□□ -0.48
SPTBN1-202ENST00000356805 TPI1P60174 286 aa12.05□□□□□ -0.48
SPTBN1-202ENST00000356805 NCAPHQ15003 741 aa12.05□□□□□ -0.48
SPTBN1-202ENST00000356805 MYCBPAPQ8TBZ2 947 aa12.05□□□□□ -0.48
SPTBN1-202ENST00000356805 NSL1Q96IY1 281 aa12.05□□□□□ -0.48
SPTBN1-202ENST00000356805 ZFRQ96KR1 1074 aaKnown RBP12.05□□□□□ -0.48
SPTBN1-202ENST00000356805 LBHD1Q9BQE6 289 aaPredicted RBP12.05□□□□□ -0.48
SPTBN1-202ENST00000356805 TRIM62Q9BVG3 475 aa12.05□□□□□ -0.48
SPTBN1-202ENST00000356805 FUT8Q9BYC5 575 aa12.05□□□□□ -0.48
SPTBN1-202ENST00000356805 ISCUQ9H1K1 167 aa12.05□□□□□ -0.48
SPTBN1-202ENST00000356805 A8MXQ7 604 aa12.05□□□□□ -0.48
SPTBN1-202ENST00000356805 MLNP12872 115 aa12.05□□□□□ -0.48
SPTBN1-202ENST00000356805 NQO1P15559 274 aaKnown RBP12.05□□□□□ -0.48
SPTBN1-202ENST00000356805 ARSEP51690 589 aa12.05□□□□□ -0.48
SPTBN1-202ENST00000356805 TTLL4Q14679 1199 aa12.05□□□□□ -0.48
SPTBN1-202ENST00000356805 FRMD8Q9BZ67 464 aaPredicted RBP12.05□□□□□ -0.48
SPTBN1-202ENST00000356805 PSMC3IPQ9P2W1 217 aaPredicted RBP12.05□□□□□ -0.48
SPTBN1-202ENST00000356805 KYNUQ16719 465 aa12.05□□□□□ -0.48
SPTBN1-202ENST00000356805 NLRP9Q7RTR0 991 aa12.05□□□□□ -0.48
SPTBN1-202ENST00000356805 POLR3FQ9H1D9 316 aaPredicted RBP12.05□□□□□ -0.48
SPTBN1-202ENST00000356805 CD274Q9NZQ7 290 aa12.05□□□□□ -0.48
SPTBN1-202ENST00000356805 TOMM70O94826 608 aa12.04□□□□□ -0.48
SPTBN1-202ENST00000356805 EIF2S1P05198 315 aaKnown RBP12.04□□□□□ -0.48
SPTBN1-202ENST00000356805 CSE1LP55060 971 aaKnown RBP12.04□□□□□ -0.48
SPTBN1-202ENST00000356805 FAM182BQ5T319 152 aa12.04□□□□□ -0.48
SPTBN1-202ENST00000356805 SNRNP48Q6IEG0 339 aaKnown RBP12.04□□□□□ -0.48
SPTBN1-202ENST00000356805 RHOT1Q8IXI2 618 aa12.04□□□□□ -0.48
SPTBN1-202ENST00000356805 LRRC1Q9BTT6 524 aa12.04□□□□□ -0.48
SPTBN1-202ENST00000356805 MRPL4Q9BYD3 311 aaKnown RBP12.04□□□□□ -0.48
SPTBN1-202ENST00000356805 IL1RL2Q9HB29 575 aa12.04□□□□□ -0.48
SPTBN1-202ENST00000356805 HIST1H2AGP0C0S8 130 aaPredicted RBP12.04□□□□□ -0.48
SPTBN1-202ENST00000356805 HIST1H2ADP20671 130 aa12.04□□□□□ -0.48
SPTBN1-202ENST00000356805 SERPINB9P50453 376 aa12.04□□□□□ -0.48
SPTBN1-202ENST00000356805 CACNB3P54284 484 aa12.04□□□□□ -0.48
SPTBN1-202ENST00000356805 TSGA10IPQ3SY00 556 aa12.04□□□□□ -0.48
SPTBN1-202ENST00000356805 HIST1H2AHQ96KK5 128 aa12.04□□□□□ -0.48
SPTBN1-202ENST00000356805 HIST1H2AJQ99878 128 aa12.04□□□□□ -0.48
SPTBN1-202ENST00000356805 H2AFJQ9BTM1 129 aa12.04□□□□□ -0.48
SPTBN1-202ENST00000356805 MAN1C1Q9NR34 630 aa12.04□□□□□ -0.48
SPTBN1-202ENST00000356805 ABCC10Q5T3U5 1492 aa12.04□□□□□ -0.48
SPTBN1-202ENST00000356805 FGFR4P22455 802 aa12.04□□□□□ -0.48
SPTBN1-202ENST00000356805 BCAR1P56945 870 aa12.04□□□□□ -0.48
SPTBN1-202ENST00000356805 TRIM71Q2Q1W2 868 aaKnown RBP12.04□□□□□ -0.48
SPTBN1-202ENST00000356805 DEPDC7Q96QD5 511 aa12.04□□□□□ -0.48
SPTBN1-202ENST00000356805 PYGMP11217 842 aa12.04□□□□□ -0.48
SPTBN1-202ENST00000356805 C1orf54Q8WWF1 131 aa12.04□□□□□ -0.48
SPTBN1-202ENST00000356805 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.04□□□□□ -0.48
SPTBN1-202ENST00000356805 ESYT3A0FGR9 886 aa12.04□□□□□ -0.48
SPTBN1-202ENST00000356805 SRRM3A6NNA2 597 aaPredicted RBP12.04□□□□□ -0.48
SPTBN1-202ENST00000356805 SLC26A4O43511 780 aa12.04□□□□□ -0.48
SPTBN1-202ENST00000356805 TCN1P20061 433 aaPredicted RBP12.04□□□□□ -0.48
SPTBN1-202ENST00000356805 COPB2P35606 906 aa12.04□□□□□ -0.48
SPTBN1-202ENST00000356805 SCTRP47872 440 aa12.04□□□□□ -0.48
SPTBN1-202ENST00000356805 MFSD14CQ5VZR4 134 aa12.04□□□□□ -0.48
SPTBN1-202ENST00000356805 SWSAP1Q6NVH7 229 aa12.04□□□□□ -0.48
SPTBN1-202ENST00000356805 ARMC6Q6NXE6 501 aa12.04□□□□□ -0.48
SPTBN1-202ENST00000356805 COL23A1Q86Y22 540 aaPredicted RBP12.04□□□□□ -0.48
SPTBN1-202ENST00000356805 ASAP3Q8TDY4 903 aa12.04□□□□□ -0.48
SPTBN1-202ENST00000356805 CEP95Q96GE4 821 aa12.04□□□□□ -0.48
SPTBN1-202ENST00000356805 RNPC3Q96LT9 517 aaKnown RBP12.04□□□□□ -0.48
SPTBN1-202ENST00000356805 NPHS2Q9NP85 383 aa12.04□□□□□ -0.48
SPTBN1-202ENST00000356805 ENO3P13929 434 aaPredicted RBP12.04□□□□□ -0.48
SPTBN1-202ENST00000356805 PID1Q7Z2X4 250 aa12.04□□□□□ -0.48
SPTBN1-202ENST00000356805 JADE3Q92613 823 aa12.04□□□□□ -0.48
SPTBN1-202ENST00000356805 FAM167AQ96KS9 214 aa12.04□□□□□ -0.48
SPTBN1-202ENST00000356805 SERPINB12Q96P63 405 aa12.04□□□□□ -0.48
SPTBN1-202ENST00000356805 FHOD1Q9Y613 1164 aa12.04□□□□□ -0.48
SPTBN1-202ENST00000356805 TRIM49BA6NDI0 452 aa12.04□□□□□ -0.48
SPTBN1-202ENST00000356805 FTLP02792 175 aaPredicted RBP12.04□□□□□ -0.48
SPTBN1-202ENST00000356805 PRLRP16471 622 aa12.04□□□□□ -0.48
SPTBN1-202ENST00000356805 HOXD10P28358 340 aa12.04□□□□□ -0.48
SPTBN1-202ENST00000356805 C16orf72Q14CZ0 275 aa12.04□□□□□ -0.48
SPTBN1-202ENST00000356805 LUZP2Q86TE4 346 aa12.04□□□□□ -0.48
SPTBN1-202ENST00000356805 SH3RF3Q8TEJ3 882 aaPredicted RBP12.04□□□□□ -0.48
SPTBN1-202ENST00000356805 RHBDL2Q9NX52 303 aa12.04□□□□□ -0.48
SPTBN1-202ENST00000356805 MAP10Q9P2G4 905 aa12.04□□□□□ -0.48
SPTBN1-202ENST00000356805 GGT7Q9UJ14 662 aa12.04□□□□□ -0.48
SPTBN1-202ENST00000356805 ASAP1Q9ULH1 1129 aa12.04□□□□□ -0.48
SPTBN1-202ENST00000356805 POTEMA6NI47 508 aa12.03□□□□□ -0.48
SPTBN1-202ENST00000356805 TWF1Q12792 350 aa12.03□□□□□ -0.48
SPTBN1-202ENST00000356805 PHKG1Q16816 387 aa12.03□□□□□ -0.48
SPTBN1-202ENST00000356805 CIAPIN1Q6FI81 312 aa12.03□□□□□ -0.48
SPTBN1-202ENST00000356805 C16orf62Q7Z3J2 963 aa12.03□□□□□ -0.48
SPTBN1-202ENST00000356805 TNIP2Q8NFZ5 429 aa12.03□□□□□ -0.48
SPTBN1-202ENST00000356805 TADA1Q96BN2 335 aa12.03□□□□□ -0.48
SPTBN1-202ENST00000356805 BRD8Q9H0E9 1235 aa12.03□□□□□ -0.48
SPTBN1-202ENST00000356805 PUS7LQ9H0K6 701 aaKnown RBP12.03□□□□□ -0.48
SPTBN1-202ENST00000356805 PARVAQ9NVD7 372 aa12.03□□□□□ -0.48
SPTBN1-202ENST00000356805 CDY2AQ9Y6F7 541 aa12.03□□□□□ -0.48
SPTBN1-202ENST00000356805 CDY1Q9Y6F8 540 aa12.03□□□□□ -0.48
SPTBN1-202ENST00000356805 MYH10P35580 1976 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms