RNA–Protein interactions for RNA: ENST00000356786.9

CCDC88B-202, Transcript of coiled-coil domain containing 88B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC88B, Length 4,915 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88B-202ENST00000356786 NLGN1Q8N2Q7 840 aa20.53■□□□□ 0.88
CCDC88B-202ENST00000356786 SPDYE1Q8NFV5 336 aaPredicted RBP20.53■□□□□ 0.88
CCDC88B-202ENST00000356786 ATP9BO43861 1147 aa20.53■□□□□ 0.88
CCDC88B-202ENST00000356786 SNX2O60749 519 aa20.53■□□□□ 0.88
CCDC88B-202ENST00000356786 MRPL1Q9BYD6 325 aaKnown RBP20.53■□□□□ 0.88
CCDC88B-202ENST00000356786 C20orf96Q9NUD7 363 aaPredicted RBP20.53■□□□□ 0.88
CCDC88B-202ENST00000356786 ZNF568Q3ZCX4 644 aa20.53■□□□□ 0.88
CCDC88B-202ENST00000356786 CDKAL1Q5VV42 579 aa20.53■□□□□ 0.88
CCDC88B-202ENST00000356786 DDIASQ8IXT1 998 aa20.53■□□□□ 0.88
CCDC88B-202ENST00000356786 FAM193BQ96PV7 902 aaPredicted RBP20.53■□□□□ 0.88
CCDC88B-202ENST00000356786 EHD4Q9H223 541 aa20.53■□□□□ 0.88
CCDC88B-202ENST00000356786 ABCF3Q9NUQ8 709 aa20.53■□□□□ 0.88
CCDC88B-202ENST00000356786 RARGP13631 454 aa20.52■□□□□ 0.88
CCDC88B-202ENST00000356786 LAMB3Q13751 1172 aa20.52■□□□□ 0.88
CCDC88B-202ENST00000356786 METTL23Q86XA0 190 aa20.52■□□□□ 0.88
CCDC88B-202ENST00000356786 SNUPNO95149 360 aaKnown RBP20.52■□□□□ 0.88
CCDC88B-202ENST00000356786 CLEC4GQ6UXB4 293 aa20.52■□□□□ 0.88
CCDC88B-202ENST00000356786 NDUFAF2Q8N183 169 aa20.52■□□□□ 0.88
CCDC88B-202ENST00000356786 CNKSR1Q969H4 720 aa20.52■□□□□ 0.88
CCDC88B-202ENST00000356786 MAP3K14Q99558 947 aa20.52■□□□□ 0.88
CCDC88B-202ENST00000356786 SENP7Q9BQF6 1050 aa20.52■□□□□ 0.88
CCDC88B-202ENST00000356786 SHCBP1LQ9BZQ2 653 aa20.52■□□□□ 0.88
CCDC88B-202ENST00000356786 CAAP1Q9H8G2 361 aa20.52■□□□□ 0.88
CCDC88B-202ENST00000356786 HSPBP1Q9NZL4 362 aa20.52■□□□□ 0.88
CCDC88B-202ENST00000356786 ZSCAN5CA6NGD5 496 aaPredicted RBP20.52■□□□□ 0.88
CCDC88B-202ENST00000356786 FIGNQ5HY92 759 aa20.52■□□□□ 0.88
CCDC88B-202ENST00000356786 GJB7Q6PEY0 223 aa20.52■□□□□ 0.88
CCDC88B-202ENST00000356786 IFNEQ86WN2 208 aa20.52■□□□□ 0.88
CCDC88B-202ENST00000356786 HDAC7Q8WUI4 952 aa20.52■□□□□ 0.88
CCDC88B-202ENST00000356786 C18orf8Q96DM3 657 aa20.52■□□□□ 0.88
CCDC88B-202ENST00000356786 EPB41L4AQ9HCS5 686 aaPredicted RBP20.52■□□□□ 0.88
CCDC88B-202ENST00000356786 KRT8P05787 483 aa20.52■□□□□ 0.87
CCDC88B-202ENST00000356786 FNTAP49354 379 aa20.52■□□□□ 0.87
CCDC88B-202ENST00000356786 EPHA7Q15375 998 aa20.52■□□□□ 0.87
CCDC88B-202ENST00000356786 OR6P1Q8NGX9 317 aa20.52■□□□□ 0.87
CCDC88B-202ENST00000356786 USP6NLQ92738 828 aa20.52■□□□□ 0.87
CCDC88B-202ENST00000356786 AGO2Q9UKV8 859 aaKnown RBP20.52■□□□□ 0.87
CCDC88B-202ENST00000356786 O00370 1275 aa20.51■□□□□ 0.87
CCDC88B-202ENST00000356786 BTNL9Q6UXG8 535 aa20.51■□□□□ 0.87
CCDC88B-202ENST00000356786 PACSIN1Q9BY11 444 aa20.51■□□□□ 0.87
CCDC88B-202ENST00000356786 TRIM28Q13263 835 aaKnown RBP20.51■□□□□ 0.87
CCDC88B-202ENST00000356786 SH2D3AQ9BRG2 576 aa20.51■□□□□ 0.87
CCDC88B-202ENST00000356786 THAP2Q9H0W7 228 aa20.51■□□□□ 0.87
CCDC88B-202ENST00000356786 USP32Q8NFA0 1604 aa20.51■□□□□ 0.87
CCDC88B-202ENST00000356786 E7ENQ6 273 aa20.51■□□□□ 0.87
CCDC88B-202ENST00000356786 Q3C1V9 767 aa20.51■□□□□ 0.87
CCDC88B-202ENST00000356786 MTHFD1LQ6UB35 978 aa20.51■□□□□ 0.87
CCDC88B-202ENST00000356786 C16orf89Q6UX73 402 aa20.51■□□□□ 0.87
CCDC88B-202ENST00000356786 FAM84BQ96KN1 310 aaPredicted RBP20.51■□□□□ 0.87
CCDC88B-202ENST00000356786 NDUFA13Q9P0J0 144 aa20.51■□□□□ 0.87
CCDC88B-202ENST00000356786 ARHGAP20Q9P2F6 1191 aa20.51■□□□□ 0.87
CCDC88B-202ENST00000356786 GABBR1Q9UBS5 961 aa20.51■□□□□ 0.87
CCDC88B-202ENST00000356786 PLEKHG2Q9H7P9 1386 aa20.51■□□□□ 0.87
CCDC88B-202ENST00000356786 MAP2K7O14733 419 aa20.51■□□□□ 0.87
CCDC88B-202ENST00000356786 ANGPT2O15123 496 aa20.51■□□□□ 0.87
CCDC88B-202ENST00000356786 GPC3P51654 580 aa20.51■□□□□ 0.87
CCDC88B-202ENST00000356786 PSMC5P62195 406 aa20.51■□□□□ 0.87
CCDC88B-202ENST00000356786 SLC20A2Q08357 652 aa20.51■□□□□ 0.87
CCDC88B-202ENST00000356786 TTI2Q6NXR4 508 aa20.51■□□□□ 0.87
CCDC88B-202ENST00000356786 CD209Q9NNX6 404 aa20.51■□□□□ 0.87
CCDC88B-202ENST00000356786 APOL1O14791 398 aa20.5■□□□□ 0.87
CCDC88B-202ENST00000356786 PDE5AO76074 875 aa20.5■□□□□ 0.87
CCDC88B-202ENST00000356786 CYGBQ8WWM9 190 aa20.5■□□□□ 0.87
CCDC88B-202ENST00000356786 COA1Q9GZY4 146 aa20.5■□□□□ 0.87
CCDC88B-202ENST00000356786 SERPINB9P50453 376 aa20.5■□□□□ 0.87
CCDC88B-202ENST00000356786 CDK17Q00537 523 aa20.5■□□□□ 0.87
CCDC88B-202ENST00000356786 CHI3L2Q15782 390 aa20.5■□□□□ 0.87
CCDC88B-202ENST00000356786 PGBD4Q96DM1 585 aa20.5■□□□□ 0.87
CCDC88B-202ENST00000356786 ARHGEF26Q96DR7 871 aa20.5■□□□□ 0.87
CCDC88B-202ENST00000356786 ZNF341Q9BYN7 854 aa20.5■□□□□ 0.87
CCDC88B-202ENST00000356786 OLFML3Q9NRN5 406 aa20.5■□□□□ 0.87
CCDC88B-202ENST00000356786 DTNAQ9Y4J8 743 aa20.5■□□□□ 0.87
CCDC88B-202ENST00000356786 RALAP11233 206 aa20.5■□□□□ 0.87
CCDC88B-202ENST00000356786 AKR1B1P15121 316 aa20.5■□□□□ 0.87
CCDC88B-202ENST00000356786 ZC2HC1CQ53FD0 456 aaPredicted RBP20.5■□□□□ 0.87
CCDC88B-202ENST00000356786 FRA10AC1Q70Z53 315 aa20.5■□□□□ 0.87
CCDC88B-202ENST00000356786 SEPT12Q8IYM1 358 aa20.5■□□□□ 0.87
CCDC88B-202ENST00000356786 MAGEB18Q96M61 343 aa20.5■□□□□ 0.87
CCDC88B-202ENST00000356786 SLC5A4Q9NY91 659 aa20.5■□□□□ 0.87
CCDC88B-202ENST00000356786 GHRP10912 638 aa20.5■□□□□ 0.87
CCDC88B-202ENST00000356786 KIF17Q9P2E2 1029 aa20.5■□□□□ 0.87
CCDC88B-202ENST00000356786 STAP1Q9ULZ2 295 aa20.5■□□□□ 0.87
CCDC88B-202ENST00000356786 CCDC159P0C7I6 412 aa20.49■□□□□ 0.87
CCDC88B-202ENST00000356786 COPAP53621 1224 aa20.49■□□□□ 0.87
CCDC88B-202ENST00000356786 ADCK1Q86TW2 530 aa20.49■□□□□ 0.87
CCDC88B-202ENST00000356786 FAM111AQ96PZ2 611 aa20.49■□□□□ 0.87
CCDC88B-202ENST00000356786 ZSWIM1Q9BR11 485 aa20.49■□□□□ 0.87
CCDC88B-202ENST00000356786 ASPSCR1Q9BZE9 553 aa20.49■□□□□ 0.87
CCDC88B-202ENST00000356786 MROH1Q8NDA8 1641 aa20.49■□□□□ 0.87
CCDC88B-202ENST00000356786 C16orf96A6NNT2 1141 aa20.49■□□□□ 0.87
CCDC88B-202ENST00000356786 SWSAP1Q6NVH7 229 aa20.49■□□□□ 0.87
CCDC88B-202ENST00000356786 TUFT1Q9NNX1 390 aa20.49■□□□□ 0.87
CCDC88B-202ENST00000356786 CNTNAP5Q8WYK1 1306 aa20.49■□□□□ 0.87
CCDC88B-202ENST00000356786 RBP3P10745 1247 aa20.49■□□□□ 0.87
CCDC88B-202ENST00000356786 SFNP31947 248 aa20.49■□□□□ 0.87
CCDC88B-202ENST00000356786 GEMIN4P57678 1058 aaKnown RBP20.49■□□□□ 0.87
CCDC88B-202ENST00000356786 SPOUT1Q5T280 376 aaKnown RBP20.49■□□□□ 0.87
CCDC88B-202ENST00000356786 ULK4Q96C45 1275 aa20.49■□□□□ 0.87
CCDC88B-202ENST00000356786 OLA1Q9NTK5 396 aaKnown RBP20.49■□□□□ 0.87
CCDC88B-202ENST00000356786 SPAG6O75602 509 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms