RNA–Protein interactions for RNA: ENST00000355766.5

VPS13A-201, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 3

Gene VPS13A, Length 753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-201ENST00000355766 SLC26A4O43511 780 aa7.77□□□□□ -1.17
VPS13A-201ENST00000355766 RB1P06400 928 aa7.77□□□□□ -1.17
VPS13A-201ENST00000355766 RSPH10BP0C881 870 aa7.77□□□□□ -1.17
VPS13A-201ENST00000355766 CD8BP10966 210 aa7.77□□□□□ -1.17
VPS13A-201ENST00000355766 GCFC2P16383 781 aaKnown RBP7.77□□□□□ -1.17
VPS13A-201ENST00000355766 NME2P22392 152 aa7.77□□□□□ -1.17
VPS13A-201ENST00000355766 MRPL12P52815 198 aaKnown RBP7.77□□□□□ -1.17
VPS13A-201ENST00000355766 NAPAP54920 295 aa7.77□□□□□ -1.17
VPS13A-201ENST00000355766 RPS6P62753 249 aaKnown RBP7.77□□□□□ -1.17
VPS13A-201ENST00000355766 ATP2C1P98194 919 aaPredicted RBP7.77□□□□□ -1.17
VPS13A-201ENST00000355766 PLCB3Q01970 1234 aa7.77□□□□□ -1.17
VPS13A-201ENST00000355766 ADAM15Q13444 863 aa7.77□□□□□ -1.17
VPS13A-201ENST00000355766 DGKDQ16760 1214 aa7.77□□□□□ -1.17
VPS13A-201ENST00000355766 CCDC96Q2M329 555 aa7.77□□□□□ -1.17
VPS13A-201ENST00000355766 RESP18Q5W5W9 173 aa7.77□□□□□ -1.17
VPS13A-201ENST00000355766 FAM173BQ6P4H8 233 aa7.77□□□□□ -1.17
VPS13A-201ENST00000355766 MOXD1Q6UVY6 613 aa7.77□□□□□ -1.17
VPS13A-201ENST00000355766 RNF207Q6ZRF8 634 aa7.77□□□□□ -1.17
VPS13A-201ENST00000355766 HEATR3Q7Z4Q2 680 aa7.77□□□□□ -1.17
VPS13A-201ENST00000355766 FIBCD1Q8N539 461 aa7.77□□□□□ -1.17
VPS13A-201ENST00000355766 POU5F2Q8N7G0 328 aa7.77□□□□□ -1.17
VPS13A-201ENST00000355766 ENGASEQ8NFI3 743 aa7.77□□□□□ -1.17
VPS13A-201ENST00000355766 CLEC4DQ8WXI8 215 aa7.77□□□□□ -1.17
VPS13A-201ENST00000355766 IFIH1Q9BYX4 1025 aaKnown RBP7.77□□□□□ -1.17
VPS13A-201ENST00000355766 RIC8AQ9NPQ8 531 aa7.77□□□□□ -1.17
VPS13A-201ENST00000355766 HOOK1Q9UJC3 728 aaKnown RBP7.77□□□□□ -1.17
VPS13A-201ENST00000355766 PCDHA7Q9UN72 937 aa7.77□□□□□ -1.17
VPS13A-201ENST00000355766 KCNJ14Q9UNX9 436 aa7.77□□□□□ -1.17
VPS13A-201ENST00000355766 HPSEQ9Y251 543 aa7.77□□□□□ -1.17
VPS13A-201ENST00000355766 USP15Q9Y4E8 981 aaPredicted RBP7.77□□□□□ -1.17
VPS13A-201ENST00000355766 SRPRBQ9Y5M8 271 aaKnown RBP7.77□□□□□ -1.17
VPS13A-201ENST00000355766 ATG2AQ2TAZ0 1938 aa7.77□□□□□ -1.17
VPS13A-201ENST00000355766 BAZ2BQ9UIF8 2168 aaKnown RBP7.77□□□□□ -1.17
VPS13A-201ENST00000355766 ADGRA3Q8IWK6 1321 aa7.77□□□□□ -1.17
VPS13A-201ENST00000355766 B4DLN1 442 aa7.76□□□□□ -1.17
VPS13A-201ENST00000355766 CSPG5O95196 566 aa7.76□□□□□ -1.17
VPS13A-201ENST00000355766 FOSP01100 380 aaPredicted RBP7.76□□□□□ -1.17
VPS13A-201ENST00000355766 ZNF286BP0CG31 522 aa7.76□□□□□ -1.17
VPS13A-201ENST00000355766 CCDC192P0DO97 292 aa7.76□□□□□ -1.17
VPS13A-201ENST00000355766 FUT4P22083 530 aa7.76□□□□□ -1.17
VPS13A-201ENST00000355766 ICAM3P32942 547 aa7.76□□□□□ -1.17
VPS13A-201ENST00000355766 BMPR1AP36894 532 aa7.76□□□□□ -1.17
VPS13A-201ENST00000355766 CD96P40200 585 aa7.76□□□□□ -1.17
VPS13A-201ENST00000355766 TOB1P50616 345 aaPredicted RBP7.76□□□□□ -1.17
VPS13A-201ENST00000355766 ADCY7P51828 1080 aa7.76□□□□□ -1.17
VPS13A-201ENST00000355766 OXCT1P55809 520 aa7.76□□□□□ -1.17
VPS13A-201ENST00000355766 ZNF200P98182 395 aaPredicted RBP7.76□□□□□ -1.17
VPS13A-201ENST00000355766 GHRHRQ02643 423 aa7.76□□□□□ -1.17
VPS13A-201ENST00000355766 ZNF252P-AS1Q0IIN9 211 aa7.76□□□□□ -1.17
VPS13A-201ENST00000355766 COASYQ13057 564 aa7.76□□□□□ -1.17
VPS13A-201ENST00000355766 NONOQ15233 471 aaKnown RBP eCLIP7.76□□□□□ -1.17
VPS13A-201ENST00000355766 ENOX2Q16206 610 aaKnown RBP7.76□□□□□ -1.17
VPS13A-201ENST00000355766 PTPN21Q16825 1174 aa7.76□□□□□ -1.17
VPS13A-201ENST00000355766 LY6KQ17RY6 165 aa7.76□□□□□ -1.17
VPS13A-201ENST00000355766 KIAA0753Q2KHM9 967 aa7.76□□□□□ -1.17
VPS13A-201ENST00000355766 TTC38Q5R3I4 469 aa7.76□□□□□ -1.17
VPS13A-201ENST00000355766 SYDE2Q5VT97 1194 aa7.76□□□□□ -1.17
VPS13A-201ENST00000355766 SERINC5Q86VE9 423 aa7.76□□□□□ -1.17
VPS13A-201ENST00000355766 ADGRF4Q8IZF3 695 aa7.76□□□□□ -1.17
VPS13A-201ENST00000355766 FSIP1Q8NA03 581 aa7.76□□□□□ -1.17
VPS13A-201ENST00000355766 C3orf58Q8NDZ4 430 aa7.76□□□□□ -1.17
VPS13A-201ENST00000355766 GPBAR1Q8TDU6 330 aa7.76□□□□□ -1.17
VPS13A-201ENST00000355766 SEPT8Q92599 483 aa7.76□□□□□ -1.17
VPS13A-201ENST00000355766 CUL5Q93034 780 aa7.76□□□□□ -1.17
VPS13A-201ENST00000355766 PPP2R3CQ969Q6 453 aa7.76□□□□□ -1.17
VPS13A-201ENST00000355766 CHAMP1Q96JM3 812 aa7.76□□□□□ -1.17
VPS13A-201ENST00000355766 AK8Q96MA6 479 aa7.76□□□□□ -1.17
VPS13A-201ENST00000355766 PIGSQ96S52 555 aa7.76□□□□□ -1.17
VPS13A-201ENST00000355766 PHF7Q9BWX1 381 aaPredicted RBP7.76□□□□□ -1.17
VPS13A-201ENST00000355766 AMNQ9BXJ7 453 aa7.76□□□□□ -1.17
VPS13A-201ENST00000355766 TNMDQ9H2S6 317 aa7.76□□□□□ -1.17
VPS13A-201ENST00000355766 TSPY26PQ9H489 355 aa7.76□□□□□ -1.17
VPS13A-201ENST00000355766 JMJD4Q9H9V9 463 aa7.76□□□□□ -1.17
VPS13A-201ENST00000355766 GRPEL1Q9HAV7 217 aa7.76□□□□□ -1.17
VPS13A-201ENST00000355766 RC3H2Q9HBD1 1191 aaKnown RBP7.76□□□□□ -1.17
VPS13A-201ENST00000355766 SSU72Q9NP77 194 aaKnown RBP7.76□□□□□ -1.17
VPS13A-201ENST00000355766 GJB4Q9NTQ9 266 aa7.76□□□□□ -1.17
VPS13A-201ENST00000355766 DACT1Q9NYF0 836 aa7.76□□□□□ -1.17
VPS13A-201ENST00000355766 CLEC1BQ9P126 229 aa7.76□□□□□ -1.17
VPS13A-201ENST00000355766 VAV3Q9UKW4 847 aa7.76□□□□□ -1.17
VPS13A-201ENST00000355766 CLIC4Q9Y696 253 aa7.76□□□□□ -1.17
VPS13A-201ENST00000355766 MICAL3Q7RTP6 2002 aa7.76□□□□□ -1.17
VPS13A-201ENST00000355766 MED19A0JLT2 244 aaPredicted RBP7.75□□□□□ -1.17
VPS13A-201ENST00000355766 SYCE3A1L190 88 aa7.75□□□□□ -1.17
VPS13A-201ENST00000355766 CAND2O75155 1236 aa7.75□□□□□ -1.17
VPS13A-201ENST00000355766 GLP2RO95838 553 aa7.75□□□□□ -1.17
VPS13A-201ENST00000355766 PDGFBP01127 241 aaPredicted RBP7.75□□□□□ -1.17
VPS13A-201ENST00000355766 MYL1P05976 194 aa7.75□□□□□ -1.17
VPS13A-201ENST00000355766 GOLGA8HP0CJ92 632 aa7.75□□□□□ -1.17
VPS13A-201ENST00000355766 SLC16A2P36021 539 aa7.75□□□□□ -1.17
VPS13A-201ENST00000355766 LONP1P36776 959 aaKnown RBP7.75□□□□□ -1.17
VPS13A-201ENST00000355766 THPOP40225 353 aa7.75□□□□□ -1.17
VPS13A-201ENST00000355766 PRKCQQ04759 706 aa7.75□□□□□ -1.17
VPS13A-201ENST00000355766 SNW1Q13573 536 aaKnown RBP7.75□□□□□ -1.17
VPS13A-201ENST00000355766 CDC37Q16543 378 aaPredicted RBP7.75□□□□□ -1.17
VPS13A-201ENST00000355766 PPP4R3AQ6IN85 833 aa7.75□□□□□ -1.17
VPS13A-201ENST00000355766 TTBK2Q6IQ55 1244 aa7.75□□□□□ -1.17
VPS13A-201ENST00000355766 NEK8Q86SG6 692 aa7.75□□□□□ -1.17
VPS13A-201ENST00000355766 DHX37Q8IY37 1157 aaKnown RBP7.75□□□□□ -1.17
VPS13A-201ENST00000355766 TOP6BLQ8N6T0 577 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms