RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 FMO5P49326 533 aa13.33□□□□□ -0.28
SYNCRIP-201ENST00000355238 SPOUT1Q5T280 376 aaKnown RBP13.33□□□□□ -0.28
SYNCRIP-201ENST00000355238 NBPF15Q8N660 670 aa13.33□□□□□ -0.28
SYNCRIP-201ENST00000355238 TMEM245Q9H330 911 aa13.33□□□□□ -0.28
SYNCRIP-201ENST00000355238 RAB6BQ9NRW1 208 aa13.33□□□□□ -0.28
SYNCRIP-201ENST00000355238 EYA4O95677 639 aa13.33□□□□□ -0.28
SYNCRIP-201ENST00000355238 TCN1P20061 433 aaPredicted RBP13.33□□□□□ -0.28
SYNCRIP-201ENST00000355238 DOK7Q18PE1 504 aa13.33□□□□□ -0.28
SYNCRIP-201ENST00000355238 PREPLQ4J6C6 727 aaPredicted RBP13.33□□□□□ -0.28
SYNCRIP-201ENST00000355238 MIEF2Q96C03 454 aa13.33□□□□□ -0.28
SYNCRIP-201ENST00000355238 DHX35Q9H5Z1 703 aaKnown RBP13.33□□□□□ -0.28
SYNCRIP-201ENST00000355238 WDR35Q9P2L0 1181 aa13.33□□□□□ -0.28
SYNCRIP-201ENST00000355238 LOC100653049A0A140TA62 436 aa13.33□□□□□ -0.28
SYNCRIP-201ENST00000355238 PPP1R3GB7ZBB8 358 aa13.33□□□□□ -0.28
SYNCRIP-201ENST00000355238 PSMD3O43242 534 aa13.33□□□□□ -0.28
SYNCRIP-201ENST00000355238 KRT34O76011 436 aa13.33□□□□□ -0.28
SYNCRIP-201ENST00000355238 APRTP07741 180 aa13.33□□□□□ -0.28
SYNCRIP-201ENST00000355238 THRAP10827 490 aa13.33□□□□□ -0.28
SYNCRIP-201ENST00000355238 C4orf22Q6V702 233 aa13.33□□□□□ -0.28
SYNCRIP-201ENST00000355238 TPCN2Q8NHX9 752 aa13.33□□□□□ -0.28
SYNCRIP-201ENST00000355238 OTUB1Q96FW1 271 aaPredicted RBP13.33□□□□□ -0.28
SYNCRIP-201ENST00000355238 EPAS1Q99814 870 aa13.33□□□□□ -0.28
SYNCRIP-201ENST00000355238 GDF11O95390 407 aa13.32□□□□□ -0.28
SYNCRIP-201ENST00000355238 P3H2Q8IVL5 708 aa13.32□□□□□ -0.28
SYNCRIP-201ENST00000355238 EPS8L3Q8TE67 593 aaKnown RBP13.32□□□□□ -0.28
SYNCRIP-201ENST00000355238 SCFD1Q8WVM8 642 aa13.32□□□□□ -0.28
SYNCRIP-201ENST00000355238 PGBD4Q96DM1 585 aa13.32□□□□□ -0.28
SYNCRIP-201ENST00000355238 EPS8L2Q9H6S3 715 aa13.32□□□□□ -0.28
SYNCRIP-201ENST00000355238 ZNF556Q9HAH1 456 aa13.32□□□□□ -0.28
SYNCRIP-201ENST00000355238 TMEM260Q9NX78 707 aa13.32□□□□□ -0.28
SYNCRIP-201ENST00000355238 ATP10AO60312 1499 aa13.32□□□□□ -0.28
SYNCRIP-201ENST00000355238 SLC34A1Q06495 639 aa13.32□□□□□ -0.28
SYNCRIP-201ENST00000355238 PID1Q7Z2X4 250 aa13.32□□□□□ -0.28
SYNCRIP-201ENST00000355238 YTHDF3Q7Z739 585 aaKnown RBP13.32□□□□□ -0.28
SYNCRIP-201ENST00000355238 PPIL6Q8IXY8 311 aa13.32□□□□□ -0.28
SYNCRIP-201ENST00000355238 THNSL1Q8IYQ7 743 aa13.32□□□□□ -0.28
SYNCRIP-201ENST00000355238 TRIM63Q969Q1 353 aa13.32□□□□□ -0.28
SYNCRIP-201ENST00000355238 ATXN7L3BQ96GX2 97 aa13.32□□□□□ -0.28
SYNCRIP-201ENST00000355238 MPP4Q96JB8 637 aa13.32□□□□□ -0.28
SYNCRIP-201ENST00000355238 TAGLN3Q9UI15 199 aa13.32□□□□□ -0.28
SYNCRIP-201ENST00000355238 UTYO14607 1347 aa13.32□□□□□ -0.28
SYNCRIP-201ENST00000355238 HEG1Q9ULI3 1381 aa13.32□□□□□ -0.28
SYNCRIP-201ENST00000355238 PSMA4P25789 261 aaKnown RBP13.32□□□□□ -0.28
SYNCRIP-201ENST00000355238 TPP2P29144 1249 aaPredicted RBP13.32□□□□□ -0.28
SYNCRIP-201ENST00000355238 NUDT2P50583 147 aa13.32□□□□□ -0.28
SYNCRIP-201ENST00000355238 UBE3AQ05086 875 aa13.32□□□□□ -0.28
SYNCRIP-201ENST00000355238 KCTD2Q14681 263 aa13.32□□□□□ -0.28
SYNCRIP-201ENST00000355238 OASLQ15646 514 aaKnown RBP13.32□□□□□ -0.28
SYNCRIP-201ENST00000355238 MAPK6Q16659 721 aa13.32□□□□□ -0.28
SYNCRIP-201ENST00000355238 ACTRT1Q8TDG2 376 aa13.32□□□□□ -0.28
SYNCRIP-201ENST00000355238 KRT35Q92764 455 aa13.32□□□□□ -0.28
SYNCRIP-201ENST00000355238 KCNB2Q92953 911 aa13.32□□□□□ -0.28
SYNCRIP-201ENST00000355238 PCDHGB4Q9UN71 923 aa13.32□□□□□ -0.28
SYNCRIP-201ENST00000355238 SAC3D1A6NKF1 404 aa13.32□□□□□ -0.28
SYNCRIP-201ENST00000355238 TRPC5OSA6NMA1 111 aa13.32□□□□□ -0.28
SYNCRIP-201ENST00000355238 GUCY1A2P33402 732 aa13.32□□□□□ -0.28
SYNCRIP-201ENST00000355238 SESN2P58004 480 aaPredicted RBP13.32□□□□□ -0.28
SYNCRIP-201ENST00000355238 RPS6P62753 249 aaKnown RBP13.32□□□□□ -0.28
SYNCRIP-201ENST00000355238 KRT76Q01546 638 aa13.32□□□□□ -0.28
SYNCRIP-201ENST00000355238 TMC5Q6UXY8 1006 aa13.32□□□□□ -0.28
SYNCRIP-201ENST00000355238 ZKSCAN4Q969J2 545 aaPredicted RBP13.32□□□□□ -0.28
SYNCRIP-201ENST00000355238 WHRNQ9P202 907 aa13.32□□□□□ -0.28
SYNCRIP-201ENST00000355238 KPNA4O00629 521 aaPredicted RBP13.32□□□□□ -0.28
SYNCRIP-201ENST00000355238 SFNP31947 248 aa13.32□□□□□ -0.28
SYNCRIP-201ENST00000355238 ATXN3P54252 364 aaPredicted RBP13.32□□□□□ -0.28
SYNCRIP-201ENST00000355238 PPHLN1Q8NEY8 458 aaKnown RBP13.32□□□□□ -0.28
SYNCRIP-201ENST00000355238 GPBP1L1Q9HC44 474 aaPredicted RBP13.32□□□□□ -0.28
SYNCRIP-201ENST00000355238 KIAA0391O15091 583 aaKnown RBP13.31□□□□□ -0.28
SYNCRIP-201ENST00000355238 MLH1P40692 756 aa13.31□□□□□ -0.28
SYNCRIP-201ENST00000355238 PDAP1Q13442 181 aaKnown RBP13.31□□□□□ -0.28
SYNCRIP-201ENST00000355238 MTMR1Q13613 665 aa13.31□□□□□ -0.28
SYNCRIP-201ENST00000355238 EPHA10Q5JZY3 1008 aa13.31□□□□□ -0.28
SYNCRIP-201ENST00000355238 PLEKHA7Q6IQ23 1121 aa13.31□□□□□ -0.28
SYNCRIP-201ENST00000355238 TMEM179Q6ZVK1 233 aa13.31□□□□□ -0.28
SYNCRIP-201ENST00000355238 EGFL8Q99944 293 aa13.31□□□□□ -0.28
SYNCRIP-201ENST00000355238 TASP1Q9H6P5 420 aa13.31□□□□□ -0.28
SYNCRIP-201ENST00000355238 MBD5Q9P267 1494 aa13.31□□□□□ -0.28
SYNCRIP-201ENST00000355238 DDX5P17844 614 aaKnown RBP13.31□□□□□ -0.28
SYNCRIP-201ENST00000355238 C4BPBP20851 252 aa13.31□□□□□ -0.28
SYNCRIP-201ENST00000355238 STK4Q13043 487 aa13.31□□□□□ -0.28
SYNCRIP-201ENST00000355238 PRKG1Q13976 671 aa13.31□□□□□ -0.28
SYNCRIP-201ENST00000355238 SLC27A3Q5K4L6 730 aa13.31□□□□□ -0.28
SYNCRIP-201ENST00000355238 RRM2BQ7LG56 351 aa13.31□□□□□ -0.28
SYNCRIP-201ENST00000355238 TMEM117Q9H0C3 514 aa13.31□□□□□ -0.28
SYNCRIP-201ENST00000355238 ABCF3Q9NUQ8 709 aa13.31□□□□□ -0.28
SYNCRIP-201ENST00000355238 TDP2O95551 362 aa13.31□□□□□ -0.28
SYNCRIP-201ENST00000355238 QARSP47897 775 aaKnown RBP13.31□□□□□ -0.28
SYNCRIP-201ENST00000355238 PLEKHM3Q6ZWE6 761 aa13.31□□□□□ -0.28
SYNCRIP-201ENST00000355238 SLC13A5Q86YT5 568 aaPredicted RBP13.31□□□□□ -0.28
SYNCRIP-201ENST00000355238 FOXP4Q8IVH2 680 aaPredicted RBP13.31□□□□□ -0.28
SYNCRIP-201ENST00000355238 FAM167AQ96KS9 214 aa13.31□□□□□ -0.28
SYNCRIP-201ENST00000355238 KLF6Q99612 283 aaPredicted RBP13.31□□□□□ -0.28
SYNCRIP-201ENST00000355238 NCAPD2Q15021 1401 aa13.31□□□□□ -0.28
SYNCRIP-201ENST00000355238 ATP9BO43861 1147 aa13.31□□□□□ -0.28
SYNCRIP-201ENST00000355238 IGKV5-2P06315 115 aa13.31□□□□□ -0.28
SYNCRIP-201ENST00000355238 FAM58BPP0C7Q3 252 aa13.31□□□□□ -0.28
SYNCRIP-201ENST00000355238 EFHC1Q5JVL4 640 aa13.31□□□□□ -0.28
SYNCRIP-201ENST00000355238 CROCCP3Q8IVE0 287 aa13.31□□□□□ -0.28
SYNCRIP-201ENST00000355238 OR6P1Q8NGX9 317 aa13.31□□□□□ -0.28
SYNCRIP-201ENST00000355238 RFWD2Q8NHY2 731 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms