RNA–Protein interactions for RNA: ENST00000353414.8

COL11A1-201, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-201ENST00000353414 LZTS3O60299 673 aaPredicted RBP10.49□□□□□ -0.73
COL11A1-201ENST00000353414 AKR1B1P15121 316 aa10.49□□□□□ -0.73
COL11A1-201ENST00000353414 ALS2CLQ60I27 953 aa10.49□□□□□ -0.73
COL11A1-201ENST00000353414 PAWRQ96IZ0 340 aaKnown RBP10.49□□□□□ -0.73
COL11A1-201ENST00000353414 TASP1Q9H6P5 420 aa10.49□□□□□ -0.73
COL11A1-201ENST00000353414 HEG1Q9ULI3 1381 aa10.49□□□□□ -0.73
COL11A1-201ENST00000353414 EEF2KO00418 725 aaKnown RBP10.49□□□□□ -0.73
COL11A1-201ENST00000353414 AKAP10O43572 662 aa10.49□□□□□ -0.73
COL11A1-201ENST00000353414 KRT38O76015 456 aa10.49□□□□□ -0.73
COL11A1-201ENST00000353414 PTPN12Q05209 780 aaKnown RBP10.49□□□□□ -0.73
COL11A1-201ENST00000353414 ACTN3Q08043 901 aaPredicted RBP10.49□□□□□ -0.73
COL11A1-201ENST00000353414 HORMAD1Q86X24 394 aa10.49□□□□□ -0.73
COL11A1-201ENST00000353414 STKLD1Q8NE28 680 aa10.49□□□□□ -0.73
COL11A1-201ENST00000353414 PLEKHA8Q96JA3 519 aa10.49□□□□□ -0.73
COL11A1-201ENST00000353414 TSEN34Q9BSV6 310 aaKnown RBP10.49□□□□□ -0.73
COL11A1-201ENST00000353414 PCMTD2Q9NV79 361 aa10.49□□□□□ -0.73
COL11A1-201ENST00000353414 XPO7Q9UIA9 1087 aaKnown RBP10.49□□□□□ -0.73
COL11A1-201ENST00000353414 SLC30A1Q9Y6M5 507 aa10.49□□□□□ -0.73
COL11A1-201ENST00000353414 PYGBP11216 843 aa10.49□□□□□ -0.73
COL11A1-201ENST00000353414 GGCXP38435 758 aa10.49□□□□□ -0.73
COL11A1-201ENST00000353414 CDH18Q13634 790 aa10.49□□□□□ -0.73
COL11A1-201ENST00000353414 PGS1Q32NB8 556 aa10.49□□□□□ -0.73
COL11A1-201ENST00000353414 IZUMO3Q5VZ72 239 aa10.49□□□□□ -0.73
COL11A1-201ENST00000353414 CCDC137Q6PK04 289 aaKnown RBP10.49□□□□□ -0.73
COL11A1-201ENST00000353414 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.49□□□□□ -0.73
COL11A1-201ENST00000353414 MTIF3Q9H2K0 278 aaKnown RBP10.49□□□□□ -0.73
COL11A1-201ENST00000353414 PARVAQ9NVD7 372 aa10.49□□□□□ -0.73
COL11A1-201ENST00000353414 FBXO40Q9UH90 709 aa10.49□□□□□ -0.73
COL11A1-201ENST00000353414 DBR1Q9UK59 544 aaKnown RBP10.49□□□□□ -0.73
COL11A1-201ENST00000353414 PCDHB8Q9UN66 801 aa10.49□□□□□ -0.73
COL11A1-201ENST00000353414 ANGPT2O15123 496 aa10.48□□□□□ -0.73
COL11A1-201ENST00000353414 PCDH8O95206 1070 aa10.48□□□□□ -0.73
COL11A1-201ENST00000353414 HARS2P49590 506 aaKnown RBP10.48□□□□□ -0.73
COL11A1-201ENST00000353414 USP10Q14694 798 aaKnown RBP10.48□□□□□ -0.73
COL11A1-201ENST00000353414 OOSP2Q86WS3 158 aa10.48□□□□□ -0.73
COL11A1-201ENST00000353414 RNPEPQ9H4A4 650 aa10.48□□□□□ -0.73
COL11A1-201ENST00000353414 COL15A1P39059 1388 aa10.48□□□□□ -0.73
COL11A1-201ENST00000353414 UBE2Q2LH0YL09 131 aa10.48□□□□□ -0.73
COL11A1-201ENST00000353414 P4HBP07237 508 aaKnown RBP10.48□□□□□ -0.73
COL11A1-201ENST00000353414 SKIP12755 728 aa10.48□□□□□ -0.73
COL11A1-201ENST00000353414 ZBED6P86452 979 aa10.48□□□□□ -0.73
COL11A1-201ENST00000353414 ENAHQ8N8S7 591 aaPredicted RBP10.48□□□□□ -0.73
COL11A1-201ENST00000353414 TMEM39BQ9GZU3 492 aa10.48□□□□□ -0.73
COL11A1-201ENST00000353414 SMARCAD1Q9H4L7 1026 aa10.48□□□□□ -0.73
COL11A1-201ENST00000353414 ZNF556Q9HAH1 456 aa10.48□□□□□ -0.73
COL11A1-201ENST00000353414 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.48□□□□□ -0.73
COL11A1-201ENST00000353414 SLC39A10Q9ULF5 831 aa10.48□□□□□ -0.73
COL11A1-201ENST00000353414 UTYO14607 1347 aa10.48□□□□□ -0.73
COL11A1-201ENST00000353414 MAPKBP1O60336 1514 aa10.48□□□□□ -0.73
COL11A1-201ENST00000353414 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.48□□□□□ -0.73
COL11A1-201ENST00000353414 SNAPC2Q13487 334 aa10.48□□□□□ -0.73
COL11A1-201ENST00000353414 GALNTL6Q49A17 601 aa10.48□□□□□ -0.73
COL11A1-201ENST00000353414 PHACTR4Q8IZ21 702 aa10.48□□□□□ -0.73
COL11A1-201ENST00000353414 NDOR1Q9UHB4 597 aa10.48□□□□□ -0.73
COL11A1-201ENST00000353414 APPL1Q9UKG1 709 aa10.48□□□□□ -0.73
COL11A1-201ENST00000353414 GSNP06396 782 aa10.48□□□□□ -0.73
COL11A1-201ENST00000353414 LRRC63Q05C16 580 aa10.48□□□□□ -0.73
COL11A1-201ENST00000353414 UNC13DQ70J99 1090 aa10.48□□□□□ -0.73
COL11A1-201ENST00000353414 PCDHGA4Q9Y5G9 962 aa10.48□□□□□ -0.73
COL11A1-201ENST00000353414 CHI3L1P36222 383 aaPredicted RBP10.48□□□□□ -0.73
COL11A1-201ENST00000353414 RPS7P62081 194 aaKnown RBP10.48□□□□□ -0.73
COL11A1-201ENST00000353414 CASP8Q14790 479 aa10.48□□□□□ -0.73
COL11A1-201ENST00000353414 ELMO3Q96BJ8 720 aa10.48□□□□□ -0.73
COL11A1-201ENST00000353414 MFSD1Q9H3U5 465 aa10.48□□□□□ -0.73
COL11A1-201ENST00000353414 EXOSC4Q9NPD3 245 aaKnown RBP10.48□□□□□ -0.73
COL11A1-201ENST00000353414 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.48□□□□□ -0.73
COL11A1-201ENST00000353414 TRAPPC3O43617 180 aa10.48□□□□□ -0.73
COL11A1-201ENST00000353414 VTNP04004 478 aa10.48□□□□□ -0.73
COL11A1-201ENST00000353414 ATP1A1P05023 1023 aaKnown RBP10.48□□□□□ -0.73
COL11A1-201ENST00000353414 KRT7P08729 469 aa10.48□□□□□ -0.73
COL11A1-201ENST00000353414 KPNA1P52294 538 aaPredicted RBP10.48□□□□□ -0.73
COL11A1-201ENST00000353414 ADCK1Q86TW2 530 aa10.48□□□□□ -0.73
COL11A1-201ENST00000353414 DHX40Q8IX18 779 aaKnown RBP10.48□□□□□ -0.73
COL11A1-201ENST00000353414 ASAP3Q8TDY4 903 aa10.48□□□□□ -0.73
COL11A1-201ENST00000353414 AGBL1Q96MI9 1066 aa10.48□□□□□ -0.73
COL11A1-201ENST00000353414 TMEM117Q9H0C3 514 aa10.48□□□□□ -0.73
COL11A1-201ENST00000353414 GOLPH3LQ9H4A5 285 aa10.48□□□□□ -0.73
COL11A1-201ENST00000353414 RAB6BQ9NRW1 208 aa10.48□□□□□ -0.73
COL11A1-201ENST00000353414 TBC1D22BQ9NU19 505 aa10.48□□□□□ -0.73
COL11A1-201ENST00000353414 RASSF9O75901 435 aa10.47□□□□□ -0.73
COL11A1-201ENST00000353414 ARHGAP15Q53QZ3 475 aa10.47□□□□□ -0.73
COL11A1-201ENST00000353414 IER5Q5VY09 327 aa10.47□□□□□ -0.73
COL11A1-201ENST00000353414 ZKSCAN4Q969J2 545 aaPredicted RBP10.47□□□□□ -0.73
COL11A1-201ENST00000353414 VPS50Q96JG6 964 aa10.47□□□□□ -0.73
COL11A1-201ENST00000353414 SPATA16Q9BXB7 569 aa10.47□□□□□ -0.73
COL11A1-201ENST00000353414 NDE1Q9NXR1 346 aa10.47□□□□□ -0.73
COL11A1-201ENST00000353414 PSMD14O00487 310 aa10.47□□□□□ -0.73
COL11A1-201ENST00000353414 SH3BGRLO75368 114 aa10.47□□□□□ -0.73
COL11A1-201ENST00000353414 PMPCBO75439 489 aa10.47□□□□□ -0.73
COL11A1-201ENST00000353414 FOSL2P15408 326 aa10.47□□□□□ -0.73
COL11A1-201ENST00000353414 DEUP1Q05D60 604 aa10.47□□□□□ -0.73
COL11A1-201ENST00000353414 POM121L1PQ3SYA9 428 aa10.47□□□□□ -0.73
COL11A1-201ENST00000353414 ANKS6Q68DC2 871 aa10.47□□□□□ -0.73
COL11A1-201ENST00000353414 RHOT2Q8IXI1 618 aa10.47□□□□□ -0.73
COL11A1-201ENST00000353414 BBS2Q9BXC9 721 aa10.47□□□□□ -0.73
COL11A1-201ENST00000353414 SNX8Q9Y5X2 465 aa10.47□□□□□ -0.73
COL11A1-201ENST00000353414 MROH7-TTC4A0A0A0MT08 1334 aa10.47□□□□□ -0.73
COL11A1-201ENST00000353414 A0A087WUV0 522 aaPredicted RBP10.47□□□□□ -0.73
COL11A1-201ENST00000353414 AIM2O14862 343 aa10.47□□□□□ -0.73
COL11A1-201ENST00000353414 FOXN1O15353 648 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms