RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 ST13P5Q8NFI4 369 aaPredicted RBP8.94□□□□□ -0.98
CD44-205ENST00000352818 IL31RAQ8NI17 732 aa8.94□□□□□ -0.98
CD44-205ENST00000352818 CPLX3Q8WVH0 158 aa8.94□□□□□ -0.98
CD44-205ENST00000352818 LMBR1Q8WVP7 490 aa8.94□□□□□ -0.98
CD44-205ENST00000352818 GPRASP2Q96D09 838 aa8.94□□□□□ -0.98
CD44-205ENST00000352818 TAAR1Q96RJ0 339 aa8.94□□□□□ -0.98
CD44-205ENST00000352818 PDCD2LQ9BRP1 358 aa8.94□□□□□ -0.98
CD44-205ENST00000352818 LSM14BQ9BX40 385 aaKnown RBP8.94□□□□□ -0.98
CD44-205ENST00000352818 FGFBP2Q9BYJ0 223 aa8.94□□□□□ -0.98
CD44-205ENST00000352818 TUT1Q9H6E5 874 aaKnown RBP8.94□□□□□ -0.98
CD44-205ENST00000352818 PXMP2Q9NR77 195 aa8.94□□□□□ -0.98
CD44-205ENST00000352818 KCNH7Q9NS40 1196 aa8.94□□□□□ -0.98
CD44-205ENST00000352818 TBC1D22BQ9NU19 505 aa8.94□□□□□ -0.98
CD44-205ENST00000352818 RGL1Q9NZL6 768 aa8.94□□□□□ -0.98
CD44-205ENST00000352818 ANKFY1Q9P2R3 1169 aa8.94□□□□□ -0.98
CD44-205ENST00000352818 MYO1AQ9UBC5 1043 aa8.94□□□□□ -0.98
CD44-205ENST00000352818 TELO2Q9Y4R8 837 aa8.94□□□□□ -0.98
CD44-205ENST00000352818 ARID2Q68CP9 1835 aa8.94□□□□□ -0.98
CD44-205ENST00000352818 PATJQ8NI35 1801 aa8.94□□□□□ -0.98
CD44-205ENST00000352818 PES1O00541 588 aaKnown RBP8.93□□□□□ -0.98
CD44-205ENST00000352818 CETN3O15182 167 aa8.93□□□□□ -0.98
CD44-205ENST00000352818 MAFGO15525 162 aa8.93□□□□□ -0.98
CD44-205ENST00000352818 TRIM21P19474 475 aaKnown RBP8.93□□□□□ -0.98
CD44-205ENST00000352818 CCND2P30279 289 aa8.93□□□□□ -0.98
CD44-205ENST00000352818 JAK3P52333 1124 aa8.93□□□□□ -0.98
CD44-205ENST00000352818 KRT76Q01546 638 aa8.93□□□□□ -0.98
CD44-205ENST00000352818 FOXC1Q12948 553 aa8.93□□□□□ -0.98
CD44-205ENST00000352818 ITGB3BPQ13352 177 aaPredicted RBP8.93□□□□□ -0.98
CD44-205ENST00000352818 FZD5Q13467 585 aa8.93□□□□□ -0.98
CD44-205ENST00000352818 MTMR1Q13613 665 aa8.93□□□□□ -0.98
CD44-205ENST00000352818 ALCAMQ13740 583 aa8.93□□□□□ -0.98
CD44-205ENST00000352818 TUBB2AQ13885 445 aa8.93□□□□□ -0.98
CD44-205ENST00000352818 CTTNQ14247 550 aaKnown RBP8.93□□□□□ -0.98
CD44-205ENST00000352818 MTF1Q14872 753 aa8.93□□□□□ -0.98
CD44-205ENST00000352818 SF3A2Q15428 464 aaKnown RBP8.93□□□□□ -0.98
CD44-205ENST00000352818 CCDC40Q4G0X9 1142 aa8.93□□□□□ -0.98
CD44-205ENST00000352818 CELF3Q5SZQ8 465 aaKnown RBP8.93□□□□□ -0.98
CD44-205ENST00000352818 PSAPL1Q6NUJ1 521 aa8.93□□□□□ -0.98
CD44-205ENST00000352818 SYT10Q6XYQ8 523 aa8.93□□□□□ -0.98
CD44-205ENST00000352818 TSHZ1Q6ZSZ6 1077 aa8.93□□□□□ -0.98
CD44-205ENST00000352818 STXBP4Q6ZWJ1 553 aa8.93□□□□□ -0.98
CD44-205ENST00000352818 MIER3Q7Z3K6 550 aa8.93□□□□□ -0.98
CD44-205ENST00000352818 CREBRFQ8IUR6 639 aa8.93□□□□□ -0.98
CD44-205ENST00000352818 TMEM174Q8WUU8 243 aa8.93□□□□□ -0.98
CD44-205ENST00000352818 ANKRD7Q92527 254 aa8.93□□□□□ -0.98
CD44-205ENST00000352818 ZNF592Q92610 1267 aa8.93□□□□□ -0.98
CD44-205ENST00000352818 KIF12Q96FN5 646 aa8.93□□□□□ -0.98
CD44-205ENST00000352818 MYADMQ96S97 322 aa8.93□□□□□ -0.98
CD44-205ENST00000352818 MAP7D2Q96T17 732 aa8.93□□□□□ -0.98
CD44-205ENST00000352818 GPR20Q99678 358 aa8.93□□□□□ -0.98
CD44-205ENST00000352818 SENP7Q9BQF6 1050 aa8.93□□□□□ -0.98
CD44-205ENST00000352818 LXNQ9BS40 222 aa8.93□□□□□ -0.98
CD44-205ENST00000352818 TUBB2BQ9BVA1 445 aa8.93□□□□□ -0.98
CD44-205ENST00000352818 ZSWIM4Q9H7M6 989 aa8.93□□□□□ -0.98
CD44-205ENST00000352818 PARVGQ9HBI0 331 aa8.93□□□□□ -0.98
CD44-205ENST00000352818 SLC2A4RGQ9NR83 387 aa8.93□□□□□ -0.98
CD44-205ENST00000352818 EPS15L1Q9UBC2 864 aa8.93□□□□□ -0.98
CD44-205ENST00000352818 DNAI1Q9UI46 699 aa8.93□□□□□ -0.98
CD44-205ENST00000352818 ADAMTS20P59510 1910 aa8.93□□□□□ -0.98
CD44-205ENST00000352818 MYH11P35749 1972 aa8.93□□□□□ -0.98
CD44-205ENST00000352818 ANKRD17O75179 2603 aaKnown RBP8.93□□□□□ -0.98
CD44-205ENST00000352818 WDR81Q562E7 1941 aa8.92□□□□□ -0.98
CD44-205ENST00000352818 ZMYM2Q9UBW7 1377 aa8.92□□□□□ -0.98
CD44-205ENST00000352818 NFASCO94856 1347 aa8.92□□□□□ -0.98
CD44-205ENST00000352818 KANSL1LA0AUZ9 987 aa8.92□□□□□ -0.98
CD44-205ENST00000352818 ARHGEF35A5YM69 484 aa8.92□□□□□ -0.98
CD44-205ENST00000352818 SHISA7A6NL88 538 aa8.92□□□□□ -0.98
CD44-205ENST00000352818 TBKBP1A7MCY6 615 aa8.92□□□□□ -0.98
CD44-205ENST00000352818 CHMP2AO43633 222 aa8.92□□□□□ -0.98
CD44-205ENST00000352818 MGEA5O60502 916 aa8.92□□□□□ -0.98
CD44-205ENST00000352818 C1QL1O75973 258 aa8.92□□□□□ -0.98
CD44-205ENST00000352818 FAM13AO94988 1023 aa8.92□□□□□ -0.98
CD44-205ENST00000352818 NDUFA10O95299 355 aa8.92□□□□□ -0.98
CD44-205ENST00000352818 SLU7O95391 586 aaKnown RBP8.92□□□□□ -0.98
CD44-205ENST00000352818 LGALS2P05162 132 aa8.92□□□□□ -0.98
CD44-205ENST00000352818 MYBP10242 640 aa8.92□□□□□ -0.98
CD44-205ENST00000352818 RPL13P26373 211 aaKnown RBP8.92□□□□□ -0.98
CD44-205ENST00000352818 CYLC1P35663 651 aaPredicted RBP8.92□□□□□ -0.98
CD44-205ENST00000352818 CASP5P51878 434 aa8.92□□□□□ -0.98
CD44-205ENST00000352818 KRT83P78385 493 aa8.92□□□□□ -0.98
CD44-205ENST00000352818 MAPK7Q13164 816 aa8.92□□□□□ -0.98
CD44-205ENST00000352818 ADAM9Q13443 819 aa8.92□□□□□ -0.98
CD44-205ENST00000352818 MYBPC2Q14324 1141 aa8.92□□□□□ -0.98
CD44-205ENST00000352818 ZNF746Q6NUN9 644 aaPredicted RBP8.92□□□□□ -0.98
CD44-205ENST00000352818 WDR59Q6PJI9 974 aa8.92□□□□□ -0.98
CD44-205ENST00000352818 TMC7Q7Z402 723 aa8.92□□□□□ -0.98
CD44-205ENST00000352818 VSIG10LQ86VR7 867 aa8.92□□□□□ -0.98
CD44-205ENST00000352818 TRIM50Q86XT4 487 aa8.92□□□□□ -0.98
CD44-205ENST00000352818 TPH2Q8IWU9 490 aa8.92□□□□□ -0.98
CD44-205ENST00000352818 NELFCDQ8IXH7 590 aa8.92□□□□□ -0.98
CD44-205ENST00000352818 C4orf19Q8IY42 314 aa8.92□□□□□ -0.98
CD44-205ENST00000352818 SYN2Q92777 582 aaPredicted RBP8.92□□□□□ -0.98
CD44-205ENST00000352818 CLDN23Q96B33 292 aa8.92□□□□□ -0.98
CD44-205ENST00000352818 SPATA33Q96N06 139 aa8.92□□□□□ -0.98
CD44-205ENST00000352818 INPP4AQ96PE3 977 aaPredicted RBP8.92□□□□□ -0.98
CD44-205ENST00000352818 FIZ1Q96SL8 496 aa8.92□□□□□ -0.98
CD44-205ENST00000352818 RMDN3Q96TC7 470 aa8.92□□□□□ -0.98
CD44-205ENST00000352818 DESI2Q9BSY9 194 aa8.92□□□□□ -0.98
CD44-205ENST00000352818 MKNK1Q9BUB5 465 aa8.92□□□□□ -0.98
CD44-205ENST00000352818 RPP25Q9BUL9 199 aaKnown RBP8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms