RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 ADGRA1Q86SQ6 560 aa14.01□□□□□ -0.17
IFT88-202ENST00000351808 SAPCD2Q86UD0 394 aa14.01□□□□□ -0.17
IFT88-202ENST00000351808 NLRX1Q86UT6 975 aa14.01□□□□□ -0.17
IFT88-202ENST00000351808 CPNE8Q86YQ8 564 aa14.01□□□□□ -0.17
IFT88-202ENST00000351808 FAM186BQ8IYM0 893 aa14.01□□□□□ -0.17
IFT88-202ENST00000351808 SHKBP1Q8TBC3 707 aa14.01□□□□□ -0.17
IFT88-202ENST00000351808 SKA1Q96BD8 255 aa14.01□□□□□ -0.17
IFT88-202ENST00000351808 HNRNPABQ99729 332 aaKnown RBP14.01□□□□□ -0.17
IFT88-202ENST00000351808 TRIM55Q9BYV6 548 aa14.01□□□□□ -0.17
IFT88-202ENST00000351808 LRRC27Q9C0I9 530 aa14.01□□□□□ -0.17
IFT88-202ENST00000351808 DNAJC18Q9H819 358 aa14.01□□□□□ -0.17
IFT88-202ENST00000351808 ALG13Q9NP73 1137 aaKnown RBP14.01□□□□□ -0.17
IFT88-202ENST00000351808 SH3GLB2Q9NR46 395 aa14.01□□□□□ -0.17
IFT88-202ENST00000351808 KIF13AQ9H1H9 1805 aa14□□□□□ -0.17
IFT88-202ENST00000351808 EXOC1LA0A1B0GW35 172 aa14□□□□□ -0.17
IFT88-202ENST00000351808 POTEMA6NI47 508 aa14□□□□□ -0.17
IFT88-202ENST00000351808 NR2F2P24468 414 aa14□□□□□ -0.17
IFT88-202ENST00000351808 ANKRD20A4Q4UJ75 823 aa14□□□□□ -0.17
IFT88-202ENST00000351808 PDCD4Q53EL6 469 aaKnown RBP14□□□□□ -0.17
IFT88-202ENST00000351808 HSP90AA5PQ58FG0 334 aa14□□□□□ -0.17
IFT88-202ENST00000351808 MDH1BQ5I0G3 518 aa14□□□□□ -0.17
IFT88-202ENST00000351808 RNF207Q6ZRF8 634 aa14□□□□□ -0.17
IFT88-202ENST00000351808 ULK2Q8IYT8 1036 aa14□□□□□ -0.17
IFT88-202ENST00000351808 RBM15BQ8NDT2 890 aaKnown RBP14□□□□□ -0.17
IFT88-202ENST00000351808 GIPC3Q8TF64 312 aa14□□□□□ -0.17
IFT88-202ENST00000351808 DNAJC19Q96DA6 116 aa14□□□□□ -0.17
IFT88-202ENST00000351808 MTBPQ96DY7 904 aa14□□□□□ -0.17
IFT88-202ENST00000351808 SNF8Q96H20 258 aa14□□□□□ -0.17
IFT88-202ENST00000351808 TMEM120AQ9BXJ8 343 aa14□□□□□ -0.17
IFT88-202ENST00000351808 DNAJB4Q9UDY4 337 aa14□□□□□ -0.17
IFT88-202ENST00000351808 ANAPC5Q9UJX4 755 aa14□□□□□ -0.17
IFT88-202ENST00000351808 ITGB1BP2Q9UKP3 347 aa14□□□□□ -0.17
IFT88-202ENST00000351808 MTMR7Q9Y216 660 aa14□□□□□ -0.17
IFT88-202ENST00000351808 LZTS1Q9Y250 596 aa14□□□□□ -0.17
IFT88-202ENST00000351808 NEU2Q9Y3R4 380 aa14□□□□□ -0.17
IFT88-202ENST00000351808 WNK3Q9BYP7 1800 aa14□□□□□ -0.17
IFT88-202ENST00000351808 A0A1W2PPM1 405 aa14□□□□□ -0.17
IFT88-202ENST00000351808 MIF4GDA9UHW6 222 aaKnown RBP14□□□□□ -0.17
IFT88-202ENST00000351808 FBP2O00757 339 aa14□□□□□ -0.17
IFT88-202ENST00000351808 SPTLC1O15269 473 aa14□□□□□ -0.17
IFT88-202ENST00000351808 GGPS1O95749 300 aa14□□□□□ -0.17
IFT88-202ENST00000351808 LMNB1P20700 586 aa14□□□□□ -0.17
IFT88-202ENST00000351808 CYP7A1P22680 504 aa14□□□□□ -0.17
IFT88-202ENST00000351808 IVDP26440 423 aa14□□□□□ -0.17
IFT88-202ENST00000351808 PEX2P28328 305 aa14□□□□□ -0.17
IFT88-202ENST00000351808 CDK16Q00536 496 aa14□□□□□ -0.17
IFT88-202ENST00000351808 MESDQ14696 234 aa14□□□□□ -0.17
IFT88-202ENST00000351808 RC3H1Q5TC82 1133 aaKnown RBP14□□□□□ -0.17
IFT88-202ENST00000351808 THOC7Q6I9Y2 204 aaKnown RBP14□□□□□ -0.17
IFT88-202ENST00000351808 DHDDSQ86SQ9 333 aa14□□□□□ -0.17
IFT88-202ENST00000351808 FAM172AQ8WUF8 416 aa14□□□□□ -0.17
IFT88-202ENST00000351808 TTC25Q96NG3 672 aa14□□□□□ -0.17
IFT88-202ENST00000351808 C12orf65Q9H3J6 166 aaKnown RBP14□□□□□ -0.17
IFT88-202ENST00000351808 LRP2BPQ9P2M1 347 aa14□□□□□ -0.17
IFT88-202ENST00000351808 ZNF330Q9Y3S2 320 aaPredicted RBP14□□□□□ -0.17
IFT88-202ENST00000351808 FCHO1O14526 889 aa13.99□□□□□ -0.17
IFT88-202ENST00000351808 ENO1P06733 434 aaKnown RBP13.99□□□□□ -0.17
IFT88-202ENST00000351808 COMTP21964 271 aa13.99□□□□□ -0.17
IFT88-202ENST00000351808 ADRA1DP25100 572 aa13.99□□□□□ -0.17
IFT88-202ENST00000351808 GCAP28676 217 aa13.99□□□□□ -0.17
IFT88-202ENST00000351808 KRT72Q14CN4 511 aa13.99□□□□□ -0.17
IFT88-202ENST00000351808 CHRNA2Q15822 529 aa13.99□□□□□ -0.17
IFT88-202ENST00000351808 TMCO4Q5TGY1 634 aa13.99□□□□□ -0.17
IFT88-202ENST00000351808 DGKHQ86XP1 1220 aa13.99□□□□□ -0.17
IFT88-202ENST00000351808 TMPRSS6Q8IU80 811 aa13.99□□□□□ -0.17
IFT88-202ENST00000351808 SCFD1Q8WVM8 642 aa13.99□□□□□ -0.17
IFT88-202ENST00000351808 GFM2Q969S9 779 aaKnown RBP13.99□□□□□ -0.17
IFT88-202ENST00000351808 SNX27Q96L92 541 aa13.99□□□□□ -0.17
IFT88-202ENST00000351808 ARPC5LQ9BPX5 153 aa13.99□□□□□ -0.17
IFT88-202ENST00000351808 TCHPQ9BT92 498 aa13.99□□□□□ -0.17
IFT88-202ENST00000351808 KCTD10Q9H3F6 313 aa13.99□□□□□ -0.17
IFT88-202ENST00000351808 SLAIN2Q9P270 581 aa13.99□□□□□ -0.17
IFT88-202ENST00000351808 ADAMTS6Q9UKP5 1117 aa13.99□□□□□ -0.17
IFT88-202ENST00000351808 SMG5Q9UPR3 1016 aaKnown RBP13.99□□□□□ -0.17
IFT88-202ENST00000351808 DMTF1Q9Y222 760 aa13.99□□□□□ -0.17
IFT88-202ENST00000351808 PCDH11YQ9BZA8 1340 aa13.99□□□□□ -0.17
IFT88-202ENST00000351808 SH3PXD2BA1X283 911 aa13.99□□□□□ -0.17
IFT88-202ENST00000351808 TTLL13PA6NNM8 815 aa13.99□□□□□ -0.17
IFT88-202ENST00000351808 H3BSA7 217 aa13.99□□□□□ -0.17
IFT88-202ENST00000351808 WDR46O15213 610 aaKnown RBP13.99□□□□□ -0.17
IFT88-202ENST00000351808 PDGFRBP09619 1106 aa13.99□□□□□ -0.17
IFT88-202ENST00000351808 TFPTP0C1Z6 253 aa13.99□□□□□ -0.17
IFT88-202ENST00000351808 PHKG2P15735 406 aa13.99□□□□□ -0.17
IFT88-202ENST00000351808 FOLH1Q04609 750 aa13.99□□□□□ -0.17
IFT88-202ENST00000351808 MTMR2Q13614 643 aa13.99□□□□□ -0.17
IFT88-202ENST00000351808 EPHA7Q15375 998 aa13.99□□□□□ -0.17
IFT88-202ENST00000351808 SNX29Q8TEQ0 813 aa13.99□□□□□ -0.17
IFT88-202ENST00000351808 GDPD5Q8WTR4 605 aa13.99□□□□□ -0.17
IFT88-202ENST00000351808 NMUR2Q9GZQ4 415 aa13.99□□□□□ -0.17
IFT88-202ENST00000351808 SENP6Q9GZR1 1112 aaPredicted RBP13.99□□□□□ -0.17
IFT88-202ENST00000351808 KCNK13Q9HB14 408 aa13.99□□□□□ -0.17
IFT88-202ENST00000351808 GCNT4Q9P109 453 aa13.99□□□□□ -0.17
IFT88-202ENST00000351808 KIAA1522Q9P206 1035 aaPredicted RBP13.99□□□□□ -0.17
IFT88-202ENST00000351808 PCDHGB4Q9UN71 923 aa13.99□□□□□ -0.17
IFT88-202ENST00000351808 PCDHGB5Q9Y5G0 923 aa13.99□□□□□ -0.17
IFT88-202ENST00000351808 MYOCOSA0A1B0GUC4 107 aa13.98□□□□□ -0.17
IFT88-202ENST00000351808 CYP26A1O43174 497 aa13.98□□□□□ -0.17
IFT88-202ENST00000351808 TM7SF2O76062 418 aa13.98□□□□□ -0.17
IFT88-202ENST00000351808 GYS1P13807 737 aa13.98□□□□□ -0.17
IFT88-202ENST00000351808 LTKP29376 864 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms