RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 CFAP58Q5T655 872 aa17.83■□□□□ 0.44
SAMM50-201ENST00000350028 MAMDC4Q6UXC1 1216 aa17.83■□□□□ 0.44
SAMM50-201ENST00000350028 IFNLR1Q8IU57 520 aaPredicted RBP17.83■□□□□ 0.44
SAMM50-201ENST00000350028 PPTC7Q8NI37 304 aa17.83■□□□□ 0.44
SAMM50-201ENST00000350028 FAM212AQ96EL1 285 aa17.83■□□□□ 0.44
SAMM50-201ENST00000350028 BTBD6Q96KE9 485 aa17.83■□□□□ 0.44
SAMM50-201ENST00000350028 SH3GL2Q99962 352 aa17.83■□□□□ 0.44
SAMM50-201ENST00000350028 PLVAPQ9BX97 442 aa17.83■□□□□ 0.44
SAMM50-201ENST00000350028 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.83■□□□□ 0.44
SAMM50-201ENST00000350028 NR2E1Q9Y466 385 aa17.83■□□□□ 0.44
SAMM50-201ENST00000350028 UMODL1Q5DID0 1318 aa17.82■□□□□ 0.44
SAMM50-201ENST00000350028 PHF2O75151 1096 aa17.82■□□□□ 0.44
SAMM50-201ENST00000350028 IL18RAPO95256 599 aa17.82■□□□□ 0.44
SAMM50-201ENST00000350028 TNNC2P02585 160 aa17.82■□□□□ 0.44
SAMM50-201ENST00000350028 CHRNA3P32297 505 aa17.82■□□□□ 0.44
SAMM50-201ENST00000350028 MARCKSL1P49006 195 aa17.82■□□□□ 0.44
SAMM50-201ENST00000350028 GUCY2FP51841 1108 aa17.82■□□□□ 0.44
SAMM50-201ENST00000350028 ZNF132P52740 706 aa17.82■□□□□ 0.44
SAMM50-201ENST00000350028 MYL6P60660 151 aa17.82■□□□□ 0.44
SAMM50-201ENST00000350028 NOMO3P69849 1222 aa17.82■□□□□ 0.44
SAMM50-201ENST00000350028 TRPC3Q13507 836 aa17.82■□□□□ 0.44
SAMM50-201ENST00000350028 MON1BQ7L1V2 547 aa17.82■□□□□ 0.44
SAMM50-201ENST00000350028 PHF13Q86YI8 300 aaPredicted RBP17.82■□□□□ 0.44
SAMM50-201ENST00000350028 EFCAB13Q8IY85 973 aa17.82■□□□□ 0.44
SAMM50-201ENST00000350028 IQCKQ8N0W5 287 aa17.82■□□□□ 0.44
SAMM50-201ENST00000350028 BRI3BPQ8WY22 251 aa17.82■□□□□ 0.44
SAMM50-201ENST00000350028 RIN2Q8WYP3 895 aaPredicted RBP17.82■□□□□ 0.44
SAMM50-201ENST00000350028 ZBTB9Q96C00 473 aa17.82■□□□□ 0.44
SAMM50-201ENST00000350028 LRRC45Q96CN5 670 aa17.82■□□□□ 0.44
SAMM50-201ENST00000350028 RUNDC3BQ96NL0 473 aa17.82■□□□□ 0.44
SAMM50-201ENST00000350028 MTMR12Q9C0I1 747 aa17.82■□□□□ 0.44
SAMM50-201ENST00000350028 NIF3L1Q9GZT8 377 aa17.82■□□□□ 0.44
SAMM50-201ENST00000350028 ANAPC7Q9UJX3 599 aa17.82■□□□□ 0.44
SAMM50-201ENST00000350028 THAP12O43422 761 aa17.81■□□□□ 0.44
SAMM50-201ENST00000350028 HOXC6P09630 235 aa17.81■□□□□ 0.44
SAMM50-201ENST00000350028 TMEM191BP0C7N4 346 aa17.81■□□□□ 0.44
SAMM50-201ENST00000350028 PYGMP11217 842 aa17.81■□□□□ 0.44
SAMM50-201ENST00000350028 RRM1P23921 792 aa17.81■□□□□ 0.44
SAMM50-201ENST00000350028 ECHS1P30084 290 aa17.81■□□□□ 0.44
SAMM50-201ENST00000350028 DR1Q01658 176 aa17.81■□□□□ 0.44
SAMM50-201ENST00000350028 PPFIA1Q13136 1202 aa17.81■□□□□ 0.44
SAMM50-201ENST00000350028 EEF1DP3Q658K8 133 aa17.81■□□□□ 0.44
SAMM50-201ENST00000350028 THNSL1Q8IYQ7 743 aa17.81■□□□□ 0.44
SAMM50-201ENST00000350028 LINC01465Q8N7H1 131 aa17.81■□□□□ 0.44
SAMM50-201ENST00000350028 ANKRD36BP1Q96IX9 119 aa17.81■□□□□ 0.44
SAMM50-201ENST00000350028 KATNBL1Q9H079 304 aa17.81■□□□□ 0.44
SAMM50-201ENST00000350028 FAM204AQ9H8W3 233 aa17.81■□□□□ 0.44
SAMM50-201ENST00000350028 MRPL47Q9HD33 250 aaKnown RBP17.81■□□□□ 0.44
SAMM50-201ENST00000350028 ERVK-5Q9HDB9 667 aa17.81■□□□□ 0.44
SAMM50-201ENST00000350028 MTUS1Q9ULD2 1270 aa17.81■□□□□ 0.44
SAMM50-201ENST00000350028 MROH7Q68CQ1 1323 aa17.81■□□□□ 0.44
SAMM50-201ENST00000350028 MYO1FO00160 1098 aa17.81■□□□□ 0.44
SAMM50-201ENST00000350028 PPFIA4O75335 1185 aa17.81■□□□□ 0.44
SAMM50-201ENST00000350028 GJB1P08034 283 aa17.81■□□□□ 0.44
SAMM50-201ENST00000350028 IGBP1P78318 339 aa17.81■□□□□ 0.44
SAMM50-201ENST00000350028 TFAMQ00059 246 aaKnown RBP17.81■□□□□ 0.44
SAMM50-201ENST00000350028 TNFAIP2Q03169 654 aa17.81■□□□□ 0.44
SAMM50-201ENST00000350028 C1QBPQ07021 282 aaKnown RBP17.81■□□□□ 0.44
SAMM50-201ENST00000350028 AADACL2Q6P093 401 aa17.81■□□□□ 0.44
SAMM50-201ENST00000350028 SLC13A5Q86YT5 568 aaPredicted RBP17.81■□□□□ 0.44
SAMM50-201ENST00000350028 CD302Q8IX05 232 aa17.81■□□□□ 0.44
SAMM50-201ENST00000350028 AFG1LQ8WV93 481 aa17.81■□□□□ 0.44
SAMM50-201ENST00000350028 ZIM3Q96PE6 472 aa17.81■□□□□ 0.44
SAMM50-201ENST00000350028 CELF4Q9BZC1 486 aaKnown RBP17.81■□□□□ 0.44
SAMM50-201ENST00000350028 CDT1Q9H211 546 aa17.81■□□□□ 0.44
SAMM50-201ENST00000350028 RPF1Q9H9Y2 349 aaKnown RBP17.81■□□□□ 0.44
SAMM50-201ENST00000350028 ADAM22Q9P0K1 906 aa17.81■□□□□ 0.44
SAMM50-201ENST00000350028 RASAL2Q9UJF2 1139 aa17.81■□□□□ 0.44
SAMM50-201ENST00000350028 EVPLQ92817 2033 aa17.8■□□□□ 0.44
SAMM50-201ENST00000350028 ZSWIM8A7E2V4 1837 aa17.8■□□□□ 0.44
SAMM50-201ENST00000350028 B4GALT5O43286 388 aa17.8■□□□□ 0.44
SAMM50-201ENST00000350028 DAPK3O43293 454 aa17.8■□□□□ 0.44
SAMM50-201ENST00000350028 ITGBL1O95965 494 aaPredicted RBP17.8■□□□□ 0.44
SAMM50-201ENST00000350028 TMOD1P28289 359 aa17.8■□□□□ 0.44
SAMM50-201ENST00000350028 DRG2P55039 364 aaKnown RBP17.8■□□□□ 0.44
SAMM50-201ENST00000350028 YWHAEP62258 255 aaKnown RBP17.8■□□□□ 0.44
SAMM50-201ENST00000350028 CYP1B1Q16678 543 aa17.8■□□□□ 0.44
SAMM50-201ENST00000350028 GJC2Q5T442 439 aaPredicted RBP17.8■□□□□ 0.44
SAMM50-201ENST00000350028 ADAT2Q7Z6V5 191 aaKnown RBP17.8■□□□□ 0.44
SAMM50-201ENST00000350028 DDX42Q86XP3 938 aaKnown RBP eCLIP17.8■□□□□ 0.44
SAMM50-201ENST00000350028 PRELID2Q8N945 189 aa17.8■□□□□ 0.44
SAMM50-201ENST00000350028 ZNF606Q8WXB4 792 aa17.8■□□□□ 0.44
SAMM50-201ENST00000350028 ERP44Q9BS26 406 aa17.8■□□□□ 0.44
SAMM50-201ENST00000350028 SCINQ9Y6U3 715 aa17.8■□□□□ 0.44
SAMM50-201ENST00000350028 SNAI1O95863 264 aaPredicted RBP17.79■□□□□ 0.44
SAMM50-201ENST00000350028 MCF2P10911 925 aa17.79■□□□□ 0.44
SAMM50-201ENST00000350028 ADCYAP1R1P41586 468 aa17.79■□□□□ 0.44
SAMM50-201ENST00000350028 KYAT1Q16773 422 aa17.79■□□□□ 0.44
SAMM50-201ENST00000350028 DUPD1Q68J44 220 aa17.79■□□□□ 0.44
SAMM50-201ENST00000350028 PLEKHA7Q6IQ23 1121 aa17.79■□□□□ 0.44
SAMM50-201ENST00000350028 DPP9Q86TI2 863 aa17.79■□□□□ 0.44
SAMM50-201ENST00000350028 CPNE8Q86YQ8 564 aa17.79■□□□□ 0.44
SAMM50-201ENST00000350028 MAIP1Q8WWC4 291 aa17.79■□□□□ 0.44
SAMM50-201ENST00000350028 MAGOHBQ96A72 148 aaKnown RBP17.79■□□□□ 0.44
SAMM50-201ENST00000350028 FAXDC2Q96IV6 333 aa17.79■□□□□ 0.44
SAMM50-201ENST00000350028 ZNF668Q96K58 619 aaPredicted RBP17.79■□□□□ 0.44
SAMM50-201ENST00000350028 C11orf70Q9BRQ4 267 aa17.79■□□□□ 0.44
SAMM50-201ENST00000350028 MINDY3Q9H8M7 445 aa17.79■□□□□ 0.44
SAMM50-201ENST00000350028 IFT122Q9HBG6 1241 aa17.79■□□□□ 0.44
SAMM50-201ENST00000350028 GBA2Q9HCG7 927 aaPredicted RBP17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms