RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 HES6Q96HZ4 224 aa11.26□□□□□ -0.61
CAPN3-203ENST00000349748 GPR101Q96P66 508 aaPredicted RBP11.26□□□□□ -0.61
CAPN3-203ENST00000349748 OSGEPQ9NPF4 335 aa11.26□□□□□ -0.61
CAPN3-203ENST00000349748 ZBTB21Q9ULJ3 1066 aa11.26□□□□□ -0.61
CAPN3-203ENST00000349748 V9GY48 417 aaPredicted RBP11.26□□□□□ -0.61
CAPN3-203ENST00000349748 C2orf71A6NGG8 1288 aa11.26□□□□□ -0.61
CAPN3-203ENST00000349748 ESRRAP11474 423 aaPredicted RBP11.26□□□□□ -0.61
CAPN3-203ENST00000349748 CYP19A1P11511 503 aaPredicted RBP11.26□□□□□ -0.61
CAPN3-203ENST00000349748 HOXD13P35453 343 aa11.26□□□□□ -0.61
CAPN3-203ENST00000349748 DCAF6Q58WW2 860 aa11.26□□□□□ -0.61
CAPN3-203ENST00000349748 CABP7Q86V35 215 aa11.26□□□□□ -0.61
CAPN3-203ENST00000349748 GLIS3Q8NEA6 775 aa11.26□□□□□ -0.61
CAPN3-203ENST00000349748 PWWP2AQ96N64 755 aa11.26□□□□□ -0.61
CAPN3-203ENST00000349748 POP1Q99575 1024 aaKnown RBP11.26□□□□□ -0.61
CAPN3-203ENST00000349748 ADAM33Q9BZ11 813 aa11.26□□□□□ -0.61
CAPN3-203ENST00000349748 ARMCX1Q9P291 453 aa11.26□□□□□ -0.61
CAPN3-203ENST00000349748 CARD8Q9Y2G2 431 aa11.26□□□□□ -0.61
CAPN3-203ENST00000349748 NEU2Q9Y3R4 380 aa11.26□□□□□ -0.61
CAPN3-203ENST00000349748 C2CD2LO14523 706 aa11.25□□□□□ -0.61
CAPN3-203ENST00000349748 MAGEB2O15479 319 aa11.25□□□□□ -0.61
CAPN3-203ENST00000349748 FGFR1OPO95684 399 aaKnown RBP11.25□□□□□ -0.61
CAPN3-203ENST00000349748 OCM2P0CE71 109 aa11.25□□□□□ -0.61
CAPN3-203ENST00000349748 OCMP0CE72 109 aaPredicted RBP11.25□□□□□ -0.61
CAPN3-203ENST00000349748 GYS1P13807 737 aa11.25□□□□□ -0.61
CAPN3-203ENST00000349748 CHKAP35790 457 aa11.25□□□□□ -0.61
CAPN3-203ENST00000349748 EPS15P42566 896 aa11.25□□□□□ -0.61
CAPN3-203ENST00000349748 DRG2P55039 364 aaKnown RBP11.25□□□□□ -0.61
CAPN3-203ENST00000349748 CTTNQ14247 550 aaKnown RBP11.25□□□□□ -0.61
CAPN3-203ENST00000349748 TXNRD1Q16881 649 aa11.25□□□□□ -0.61
CAPN3-203ENST00000349748 ALKBH5Q6P6C2 394 aaKnown RBP11.25□□□□□ -0.61
CAPN3-203ENST00000349748 RNF111Q6ZNA4 994 aa11.25□□□□□ -0.61
CAPN3-203ENST00000349748 NLRP10Q86W26 655 aa11.25□□□□□ -0.61
CAPN3-203ENST00000349748 TTC30AQ86WT1 665 aa11.25□□□□□ -0.61
CAPN3-203ENST00000349748 SH3GL1Q99961 368 aa11.25□□□□□ -0.61
CAPN3-203ENST00000349748 AAASQ9NRG9 546 aa11.25□□□□□ -0.61
CAPN3-203ENST00000349748 KBTBD4Q9NVX7 518 aa11.25□□□□□ -0.61
CAPN3-203ENST00000349748 APPL1Q9UKG1 709 aa11.25□□□□□ -0.61
CAPN3-203ENST00000349748 SHANK3Q9BYB0 1731 aa11.25□□□□□ -0.61
CAPN3-203ENST00000349748 HNRNPCL1O60812 293 aaKnown RBP11.25□□□□□ -0.61
CAPN3-203ENST00000349748 CRKLP46109 303 aaKnown RBP11.25□□□□□ -0.61
CAPN3-203ENST00000349748 KCNJ1P48048 391 aa11.25□□□□□ -0.61
CAPN3-203ENST00000349748 IFIT5Q13325 482 aaKnown RBP11.25□□□□□ -0.61
CAPN3-203ENST00000349748 DHX34Q14147 1143 aaKnown RBP11.25□□□□□ -0.61
CAPN3-203ENST00000349748 PPP2R5BQ15173 497 aa11.25□□□□□ -0.61
CAPN3-203ENST00000349748 TMED2Q15363 201 aa11.25□□□□□ -0.61
CAPN3-203ENST00000349748 NPY5RQ15761 445 aa11.25□□□□□ -0.61
CAPN3-203ENST00000349748 ANKRD20A4Q4UJ75 823 aa11.25□□□□□ -0.61
CAPN3-203ENST00000349748 HSP90AA5PQ58FG0 334 aa11.25□□□□□ -0.61
CAPN3-203ENST00000349748 SLFN11Q7Z7L1 901 aa11.25□□□□□ -0.61
CAPN3-203ENST00000349748 CROCCP3Q8IVE0 287 aa11.25□□□□□ -0.61
CAPN3-203ENST00000349748 DDX12PQ92771 950 aa11.25□□□□□ -0.61
CAPN3-203ENST00000349748 TNFRSF25Q93038 417 aa11.25□□□□□ -0.61
CAPN3-203ENST00000349748 RUNDC3BQ96NL0 473 aa11.25□□□□□ -0.61
CAPN3-203ENST00000349748 PLGRKTQ9HBL7 147 aa11.25□□□□□ -0.61
CAPN3-203ENST00000349748 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.25□□□□□ -0.61
CAPN3-203ENST00000349748 VPS51Q9UID3 782 aa11.25□□□□□ -0.61
CAPN3-203ENST00000349748 NAGPAQ9UK23 515 aa11.25□□□□□ -0.61
CAPN3-203ENST00000349748 CCNL1Q9UK58 526 aaPredicted RBP11.25□□□□□ -0.61
CAPN3-203ENST00000349748 AMFRQ9UKV5 643 aa11.25□□□□□ -0.61
CAPN3-203ENST00000349748 PCDHA3Q9Y5H8 950 aa11.25□□□□□ -0.61
CAPN3-203ENST00000349748 MAD1L1Q9Y6D9 718 aa11.25□□□□□ -0.61
CAPN3-203ENST00000349748 NUP188Q5SRE5 1749 aa11.25□□□□□ -0.61
CAPN3-203ENST00000349748 SRCAPQ6ZRS2 3230 aa11.25□□□□□ -0.61
CAPN3-203ENST00000349748 WDR91A4D1P6 747 aa11.25□□□□□ -0.61
CAPN3-203ENST00000349748 H3BRJ5 948 aa11.25□□□□□ -0.61
CAPN3-203ENST00000349748 K7EPI3 171 aa11.25□□□□□ -0.61
CAPN3-203ENST00000349748 TIMM44O43615 452 aa11.25□□□□□ -0.61
CAPN3-203ENST00000349748 TCEA1P23193 301 aaKnown RBP11.25□□□□□ -0.61
CAPN3-203ENST00000349748 ACADVLP49748 655 aa11.25□□□□□ -0.61
CAPN3-203ENST00000349748 PLCB3Q01970 1234 aa11.25□□□□□ -0.61
CAPN3-203ENST00000349748 ZBTB16Q05516 673 aa11.25□□□□□ -0.61
CAPN3-203ENST00000349748 ATP1A4Q13733 1029 aa11.25□□□□□ -0.61
CAPN3-203ENST00000349748 SPIDRQ14159 915 aa11.25□□□□□ -0.61
CAPN3-203ENST00000349748 GK3PQ14409 553 aa11.25□□□□□ -0.61
CAPN3-203ENST00000349748 WTAPQ15007 396 aa11.25□□□□□ -0.61
CAPN3-203ENST00000349748 ZYXQ15942 572 aaKnown RBP11.25□□□□□ -0.61
CAPN3-203ENST00000349748 MDH1BQ5I0G3 518 aa11.25□□□□□ -0.61
CAPN3-203ENST00000349748 SYCP2LQ5T4T6 812 aa11.25□□□□□ -0.61
CAPN3-203ENST00000349748 C1orf146Q5VVC0 180 aa11.25□□□□□ -0.61
CAPN3-203ENST00000349748 JDP2Q8WYK2 163 aa11.25□□□□□ -0.61
CAPN3-203ENST00000349748 GCNAQ96QF7 691 aa11.25□□□□□ -0.61
CAPN3-203ENST00000349748 GPATCH1Q9BRR8 931 aaKnown RBP11.25□□□□□ -0.61
CAPN3-203ENST00000349748 FHDC1Q9C0D6 1143 aaPredicted RBP11.25□□□□□ -0.61
CAPN3-203ENST00000349748 SPEF2Q9C093 1822 aa11.24□□□□□ -0.61
CAPN3-203ENST00000349748 ARHGAP10A1A4S6 786 aa11.24□□□□□ -0.61
CAPN3-203ENST00000349748 BTNL10A8MVZ5 291 aa11.24□□□□□ -0.61
CAPN3-203ENST00000349748 GOLGA8TH3BQL2 631 aa11.24□□□□□ -0.61
CAPN3-203ENST00000349748 DDX3YO15523 660 aaKnown RBP11.24□□□□□ -0.61
CAPN3-203ENST00000349748 GOLGA8HP0CJ92 632 aa11.24□□□□□ -0.61
CAPN3-203ENST00000349748 CDH2P19022 906 aaPredicted RBP11.24□□□□□ -0.61
CAPN3-203ENST00000349748 UBA7P41226 1012 aa11.24□□□□□ -0.61
CAPN3-203ENST00000349748 CCT8P50990 548 aa11.24□□□□□ -0.61
CAPN3-203ENST00000349748 FOLH1Q04609 750 aa11.24□□□□□ -0.61
CAPN3-203ENST00000349748 EFTUD2Q15029 972 aaKnown RBP eCLIP11.24□□□□□ -0.61
CAPN3-203ENST00000349748 LLGL1Q15334 1064 aa11.24□□□□□ -0.61
CAPN3-203ENST00000349748 TLR1Q15399 786 aa11.24□□□□□ -0.61
CAPN3-203ENST00000349748 SHROOM1Q2M3G4 852 aaPredicted RBP11.24□□□□□ -0.61
CAPN3-203ENST00000349748 IYDQ6PHW0 289 aa11.24□□□□□ -0.61
CAPN3-203ENST00000349748 FAM196AQ6ZSG2 479 aa11.24□□□□□ -0.61
CAPN3-203ENST00000349748 ZNF410Q86VK4 478 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms