RNA–Protein interactions for RNA: ENST00000345005.8

CLK3-201, Transcript of CDC like kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK3, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-201ENST00000345005 NLRP7Q8WX94 980 aa13.74□□□□□ -0.21
CLK3-201ENST00000345005 KAT2BQ92831 832 aa13.74□□□□□ -0.21
CLK3-201ENST00000345005 TATDN2Q93075 761 aa13.74□□□□□ -0.21
CLK3-201ENST00000345005 SCLT1Q96NL6 688 aa13.74□□□□□ -0.21
CLK3-201ENST00000345005 KATNAL1Q9BW62 490 aa13.74□□□□□ -0.21
CLK3-201ENST00000345005 HAS3O00219 553 aa13.73□□□□□ -0.21
CLK3-201ENST00000345005 PDE2AO00408 941 aaPredicted RBP13.73□□□□□ -0.21
CLK3-201ENST00000345005 CES2O00748 559 aa13.73□□□□□ -0.21
CLK3-201ENST00000345005 B4GALT5O43286 388 aa13.73□□□□□ -0.21
CLK3-201ENST00000345005 KPNA6O60684 536 aa13.73□□□□□ -0.21
CLK3-201ENST00000345005 DUSP11O75319 330 aaKnown RBP13.73□□□□□ -0.21
CLK3-201ENST00000345005 MYL3P08590 195 aa13.73□□□□□ -0.21
CLK3-201ENST00000345005 IQCF3P0C7M6 154 aa13.73□□□□□ -0.21
CLK3-201ENST00000345005 MCF2P10911 925 aa13.73□□□□□ -0.21
CLK3-201ENST00000345005 TNFSF9P41273 254 aa13.73□□□□□ -0.21
CLK3-201ENST00000345005 PSEN2P49810 448 aa13.73□□□□□ -0.21
CLK3-201ENST00000345005 GSCP56915 257 aaPredicted RBP13.73□□□□□ -0.21
CLK3-201ENST00000345005 C2orf54Q08AI8 447 aa13.73□□□□□ -0.21
CLK3-201ENST00000345005 IFI16Q16666 785 aaKnown RBP13.73□□□□□ -0.21
CLK3-201ENST00000345005 C8orf74Q6P047 294 aa13.73□□□□□ -0.21
CLK3-201ENST00000345005 GLYCTKQ8IVS8 523 aa13.73□□□□□ -0.21
CLK3-201ENST00000345005 C3orf20Q8ND61 904 aa13.73□□□□□ -0.21
CLK3-201ENST00000345005 LNX1Q8TBB1 728 aaPredicted RBP13.73□□□□□ -0.21
CLK3-201ENST00000345005 WHAMMQ8TF30 809 aa13.73□□□□□ -0.21
CLK3-201ENST00000345005 KAT5Q92993 513 aa13.73□□□□□ -0.21
CLK3-201ENST00000345005 CDT1Q9H211 546 aa13.73□□□□□ -0.21
CLK3-201ENST00000345005 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.73□□□□□ -0.218e-7■■■■■ 96.2
CLK3-201ENST00000345005 FAM169AQ9Y6X4 670 aa13.73□□□□□ -0.21
CLK3-201ENST00000345005 PTPRJQ12913 1337 aa13.73□□□□□ -0.21
CLK3-201ENST00000345005 SMIM35A0A1B0GVV1 85 aa13.72□□□□□ -0.21
CLK3-201ENST00000345005 IL18RAPO95256 599 aa13.72□□□□□ -0.21
CLK3-201ENST00000345005 VNN1O95497 513 aa13.72□□□□□ -0.21
CLK3-201ENST00000345005 GNGT1P63211 74 aa13.72□□□□□ -0.21
CLK3-201ENST00000345005 FSCN1Q16658 493 aaKnown RBP13.72□□□□□ -0.21
CLK3-201ENST00000345005 AMHR2Q16671 573 aa13.72□□□□□ -0.21
CLK3-201ENST00000345005 DUOXA2Q1HG44 320 aa13.72□□□□□ -0.21
CLK3-201ENST00000345005 EEF1DP3Q658K8 133 aa13.72□□□□□ -0.21
CLK3-201ENST00000345005 THNSL1Q8IYQ7 743 aa13.72□□□□□ -0.21
CLK3-201ENST00000345005 MICALL1Q8N3F8 863 aa13.72□□□□□ -0.21
CLK3-201ENST00000345005 ARFGAP2Q8N6H7 521 aa13.72□□□□□ -0.21
CLK3-201ENST00000345005 LRRC1Q9BTT6 524 aa13.72□□□□□ -0.21
CLK3-201ENST00000345005 PI4K2AQ9BTU6 479 aa13.72□□□□□ -0.21
CLK3-201ENST00000345005 PACSIN1Q9BY11 444 aa13.72□□□□□ -0.21
CLK3-201ENST00000345005 RPF1Q9H9Y2 349 aaKnown RBP13.72□□□□□ -0.21
CLK3-201ENST00000345005 SALL4Q9UJQ4 1053 aa13.72□□□□□ -0.21
CLK3-201ENST00000345005 CAPN6Q9Y6Q1 641 aa13.72□□□□□ -0.21
CLK3-201ENST00000345005 TRIP11Q15643 1979 aa13.72□□□□□ -0.21
CLK3-201ENST00000345005 A0A0A6YYK5 440 aaPredicted RBP13.71□□□□□ -0.21
CLK3-201ENST00000345005 MBLAC1A4D2B0 266 aaPredicted RBP13.71□□□□□ -0.21
CLK3-201ENST00000345005 ZNF185O15231 689 aa13.71□□□□□ -0.21
CLK3-201ENST00000345005 CCT5P48643 541 aa13.71□□□□□ -0.21
CLK3-201ENST00000345005 OR5B17Q8NGF7 314 aa13.71□□□□□ -0.21
CLK3-201ENST00000345005 OLIG1Q8TAK6 271 aa13.71□□□□□ -0.21
CLK3-201ENST00000345005 LENG1Q96BZ8 264 aaPredicted RBP13.71□□□□□ -0.21
CLK3-201ENST00000345005 FAM212AQ96EL1 285 aa13.71□□□□□ -0.21
CLK3-201ENST00000345005 PPP1R16BQ96T49 567 aa13.71□□□□□ -0.21
CLK3-201ENST00000345005 IMPG2Q9BZV3 1241 aa13.71□□□□□ -0.21
CLK3-201ENST00000345005 SEPT11Q9NVA2 429 aaKnown RBP13.71□□□□□ -0.21
CLK3-201ENST00000345005 CYP26A1O43174 497 aa13.71□□□□□ -0.22
CLK3-201ENST00000345005 BUB1O43683 1085 aa13.71□□□□□ -0.22
CLK3-201ENST00000345005 B4GALT4O60513 344 aa13.71□□□□□ -0.22
CLK3-201ENST00000345005 SGPL1O95470 568 aa13.71□□□□□ -0.22
CLK3-201ENST00000345005 CLTAP09496 248 aa13.71□□□□□ -0.22
CLK3-201ENST00000345005 GNAT1P11488 350 aa13.71□□□□□ -0.22
CLK3-201ENST00000345005 TBXAS1P24557 533 aaPredicted RBP13.71□□□□□ -0.22
CLK3-201ENST00000345005 FLT3LGP49771 235 aa13.71□□□□□ -0.22
CLK3-201ENST00000345005 BPIFB4P59827 614 aa13.71□□□□□ -0.22
CLK3-201ENST00000345005 BEX3Q00994 111 aa13.71□□□□□ -0.22
CLK3-201ENST00000345005 NCOA4Q13772 614 aa13.71□□□□□ -0.22
CLK3-201ENST00000345005 PCBP1Q15365 356 aaKnown RBP eCLIP13.71□□□□□ -0.22
CLK3-201ENST00000345005 DEFB115Q30KQ5 88 aa13.71□□□□□ -0.22
CLK3-201ENST00000345005 CFAP58Q5T655 872 aa13.71□□□□□ -0.22
CLK3-201ENST00000345005 KDM7AQ6ZMT4 941 aa13.71□□□□□ -0.22
CLK3-201ENST00000345005 APBB1IPQ7Z5R6 666 aaPredicted RBP13.71□□□□□ -0.22
CLK3-201ENST00000345005 DHX38Q92620 1227 aaKnown RBP13.71□□□□□ -0.22
CLK3-201ENST00000345005 GCOM2Q9BZD3 368 aaPredicted RBP13.71□□□□□ -0.22
CLK3-201ENST00000345005 ADAMTS10Q9H324 1103 aa13.71□□□□□ -0.22
CLK3-201ENST00000345005 PDZD7Q9H5P4 517 aa13.71□□□□□ -0.22
CLK3-201ENST00000345005 GDF3Q9NR23 364 aa13.71□□□□□ -0.22
CLK3-201ENST00000345005 BCCIPQ9P287 314 aaKnown RBP eCLIP13.71□□□□□ -0.22
CLK3-201ENST00000345005 GABRQQ9UN88 632 aa13.71□□□□□ -0.22
CLK3-201ENST00000345005 HMGB1P1B2RPK0 211 aaPredicted RBP13.7□□□□□ -0.22
CLK3-201ENST00000345005 GPR25O00155 361 aa13.7□□□□□ -0.22
CLK3-201ENST00000345005 CSDE1O75534 798 aaKnown RBP13.7□□□□□ -0.22
CLK3-201ENST00000345005 TNNC2P02585 160 aa13.7□□□□□ -0.22
CLK3-201ENST00000345005 MYBL2P10244 700 aa13.7□□□□□ -0.22
CLK3-201ENST00000345005 CYP2C9P11712 490 aa13.7□□□□□ -0.22
CLK3-201ENST00000345005 CYBAP13498 195 aa13.7□□□□□ -0.22
CLK3-201ENST00000345005 ARF4P18085 180 aaPredicted RBP13.7□□□□□ -0.22
CLK3-201ENST00000345005 GALCP54803 685 aa13.7□□□□□ -0.22
CLK3-201ENST00000345005 ADAM17P78536 824 aa13.7□□□□□ -0.22
CLK3-201ENST00000345005 SMYD5Q6GMV2 418 aa13.7□□□□□ -0.22
CLK3-201ENST00000345005 CDR2LQ86X02 465 aaPredicted RBP13.7□□□□□ -0.22
CLK3-201ENST00000345005 RPUSD2Q8IZ73 545 aaKnown RBP13.7□□□□□ -0.22
CLK3-201ENST00000345005 TRPV1Q8NER1 839 aa13.7□□□□□ -0.22
CLK3-201ENST00000345005 EPS8L1Q8TE68 723 aa13.7□□□□□ -0.22
CLK3-201ENST00000345005 ANKRD36BP1Q96IX9 119 aa13.7□□□□□ -0.22
CLK3-201ENST00000345005 FAM84AQ96KN4 292 aa13.7□□□□□ -0.22
CLK3-201ENST00000345005 CAPNS2Q96L46 248 aa13.7□□□□□ -0.22
CLK3-201ENST00000345005 ADPGKQ9BRR6 497 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms