RNA–Protein interactions for RNA: ENST00000344824.10

TPM4-202, Transcript of tropomyosin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TPM4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-202ENST00000344824 ALCAMQ13740 583 aa14.96□□□□□ -0.01
TPM4-202ENST00000344824 ZBTB41Q5SVQ8 909 aa14.96□□□□□ -0.01
TPM4-202ENST00000344824 RARS2Q5T160 578 aaKnown RBP14.96□□□□□ -0.01
TPM4-202ENST00000344824 FAM171A1Q5VUB5 890 aa14.96□□□□□ -0.01
TPM4-202ENST00000344824 ANKRD40Q6AI12 368 aa14.96□□□□□ -0.01
TPM4-202ENST00000344824 SLC39A4Q6P5W5 647 aa14.96□□□□□ -0.01
TPM4-202ENST00000344824 PRSS55Q6UWB4 352 aaPredicted RBP14.96□□□□□ -0.01
TPM4-202ENST00000344824 SMRP1Q8NCR6 262 aa14.96□□□□□ -0.01
TPM4-202ENST00000344824 ZNF507Q8TCN5 953 aa14.96□□□□□ -0.01
TPM4-202ENST00000344824 POMGNT1Q8WZA1 660 aa14.96□□□□□ -0.01
TPM4-202ENST00000344824 C18orf25Q96B23 403 aaPredicted RBP14.96□□□□□ -0.01
TPM4-202ENST00000344824 HVCN1Q96D96 273 aa14.96□□□□□ -0.01
TPM4-202ENST00000344824 KIF12Q96FN5 646 aa14.96□□□□□ -0.01
TPM4-202ENST00000344824 UROC1Q96N76 676 aa14.96□□□□□ -0.01
TPM4-202ENST00000344824 ZMAT2Q96NC0 199 aaKnown RBP14.96□□□□□ -0.01
TPM4-202ENST00000344824 KLHL5Q96PQ7 755 aa14.96□□□□□ -0.01
TPM4-202ENST00000344824 ACCSQ96QU6 501 aa14.96□□□□□ -0.01
TPM4-202ENST00000344824 TSG101Q99816 390 aa14.96□□□□□ -0.01
TPM4-202ENST00000344824 RPF1Q9H9Y2 349 aaKnown RBP14.96□□□□□ -0.01
TPM4-202ENST00000344824 SLC38A7Q9NVC3 462 aa14.96□□□□□ -0.01
TPM4-202ENST00000344824 CNTN3Q9P232 1028 aa14.96□□□□□ -0.01
TPM4-202ENST00000344824 TUBGCP4Q9UGJ1 667 aa14.96□□□□□ -0.01
TPM4-202ENST00000344824 EXOC7Q9UPT5 735 aa14.96□□□□□ -0.01
TPM4-202ENST00000344824 SSX2IPQ9Y2D8 614 aa14.96□□□□□ -0.01
TPM4-202ENST00000344824 NFE2L3Q9Y4A8 694 aa14.96□□□□□ -0.01
TPM4-202ENST00000344824 IRAK3Q9Y616 596 aa14.96□□□□□ -0.01
TPM4-202ENST00000344824 BICDL2A1A5D9 508 aa14.95□□□□□ -0.02
TPM4-202ENST00000344824 I3L4J1 428 aa14.95□□□□□ -0.02
TPM4-202ENST00000344824 TEX28O15482 410 aa14.95□□□□□ -0.02
TPM4-202ENST00000344824 ADH1AP07327 375 aa14.95□□□□□ -0.02
TPM4-202ENST00000344824 CLTAP09496 248 aa14.95□□□□□ -0.02
TPM4-202ENST00000344824 SP100P23497 879 aaPredicted RBP14.95□□□□□ -0.02
TPM4-202ENST00000344824 DSG1Q02413 1049 aa14.95□□□□□ -0.02
TPM4-202ENST00000344824 KNOP1Q1ED39 458 aaKnown RBP14.95□□□□□ -0.02
TPM4-202ENST00000344824 BMT2Q1RMZ1 405 aa14.95□□□□□ -0.02
TPM4-202ENST00000344824 SLC10A6Q3KNW5 377 aa14.95□□□□□ -0.02
TPM4-202ENST00000344824 CT47A1Q5JQC4 288 aaPredicted RBP14.95□□□□□ -0.02
TPM4-202ENST00000344824 RTP2Q5QGT7 225 aa14.95□□□□□ -0.02
TPM4-202ENST00000344824 CENPPQ6IPU0 288 aa14.95□□□□□ -0.02
TPM4-202ENST00000344824 PPFIBP1Q86W92 1011 aa14.95□□□□□ -0.02
TPM4-202ENST00000344824 RNF168Q8IYW5 571 aaPredicted RBP14.95□□□□□ -0.02
TPM4-202ENST00000344824 C12orf76Q8N812 135 aaPredicted RBP14.95□□□□□ -0.02
TPM4-202ENST00000344824 ENOX1Q8TC92 643 aaKnown RBP14.95□□□□□ -0.02
TPM4-202ENST00000344824 EEF2KMTQ96G04 330 aa14.95□□□□□ -0.02
TPM4-202ENST00000344824 STRA6Q9BX79 667 aa14.95□□□□□ -0.02
TPM4-202ENST00000344824 KCTD10Q9H3F6 313 aa14.95□□□□□ -0.02
TPM4-202ENST00000344824 ST6GALNAC4Q9H4F1 302 aa14.95□□□□□ -0.02
TPM4-202ENST00000344824 CDH22Q9UJ99 828 aa14.95□□□□□ -0.02
TPM4-202ENST00000344824 NUB1Q9Y5A7 615 aa14.95□□□□□ -0.02
TPM4-202ENST00000344824 DENND4AQ7Z401 1863 aa14.94□□□□□ -0.02
TPM4-202ENST00000344824 CLIC2O15247 247 aa14.94□□□□□ -0.02
TPM4-202ENST00000344824 MEFVO15553 781 aaPredicted RBP14.94□□□□□ -0.02
TPM4-202ENST00000344824 WEE2P0C1S8 567 aa14.94□□□□□ -0.02
TPM4-202ENST00000344824 BRCC3P46736 316 aa14.94□□□□□ -0.02
TPM4-202ENST00000344824 ACOT2P49753 483 aa14.94□□□□□ -0.02
TPM4-202ENST00000344824 TPM4P67936 248 aa14.94□□□□□ -0.02
TPM4-202ENST00000344824 PLCB2Q00722 1185 aa14.94□□□□□ -0.02
TPM4-202ENST00000344824 ELAVL2Q12926 359 aaKnown RBP14.94□□□□□ -0.02
TPM4-202ENST00000344824 NCAPHQ15003 741 aa14.94□□□□□ -0.02
TPM4-202ENST00000344824 SMAD2Q15796 467 aaKnown RBP14.94□□□□□ -0.02
TPM4-202ENST00000344824 ENOX2Q16206 610 aaKnown RBP14.94□□□□□ -0.02
TPM4-202ENST00000344824 PSMD5Q16401 504 aa14.94□□□□□ -0.02
TPM4-202ENST00000344824 SPATA1Q5VX52 437 aa14.94□□□□□ -0.02
TPM4-202ENST00000344824 TTI2Q6NXR4 508 aa14.94□□□□□ -0.02
TPM4-202ENST00000344824 PALB2Q86YC2 1186 aa14.94□□□□□ -0.02
TPM4-202ENST00000344824 CREBRFQ8IUR6 639 aa14.94□□□□□ -0.02
TPM4-202ENST00000344824 TMEM130Q8N3G9 435 aa14.94□□□□□ -0.02
TPM4-202ENST00000344824 C3orf58Q8NDZ4 430 aa14.94□□□□□ -0.02
TPM4-202ENST00000344824 DUSP9Q99956 384 aaKnown RBP14.94□□□□□ -0.02
TPM4-202ENST00000344824 TTPALQ9BTX7 342 aa14.94□□□□□ -0.02
TPM4-202ENST00000344824 GRPEL1Q9HAV7 217 aa14.94□□□□□ -0.02
TPM4-202ENST00000344824 MAN1C1Q9NR34 630 aa14.94□□□□□ -0.02
TPM4-202ENST00000344824 DZANK1Q9NVP4 752 aa14.94□□□□□ -0.02
TPM4-202ENST00000344824 FANCLQ9NW38 375 aa14.94□□□□□ -0.02
TPM4-202ENST00000344824 AGO2Q9UKV8 859 aaKnown RBP14.94□□□□□ -0.02
TPM4-202ENST00000344824 SCN1AP35498 2009 aa14.94□□□□□ -0.02
TPM4-202ENST00000344824 MUC3AQ02505 3323 aa14.93□□□□□ -0.02
TPM4-202ENST00000344824 TSC2P49815 1807 aa14.93□□□□□ -0.02
TPM4-202ENST00000344824 LACTBL1A8MY62 500 aa14.93□□□□□ -0.02
TPM4-202ENST00000344824 IKBKBO14920 756 aa14.93□□□□□ -0.02
TPM4-202ENST00000344824 CALUO43852 315 aaPredicted RBP14.93□□□□□ -0.02
TPM4-202ENST00000344824 GLUD1P00367 558 aa14.93□□□□□ -0.02
TPM4-202ENST00000344824 KCNE1P15382 129 aa14.93□□□□□ -0.02
TPM4-202ENST00000344824 IGFBP6P24592 240 aaPredicted RBP14.93□□□□□ -0.02
TPM4-202ENST00000344824 CLCN4P51793 760 aa14.93□□□□□ -0.02
TPM4-202ENST00000344824 GUCY2FP51841 1108 aa14.93□□□□□ -0.02
TPM4-202ENST00000344824 KCNC3Q14003 757 aa14.93□□□□□ -0.02
TPM4-202ENST00000344824 KYAT1Q16773 422 aa14.93□□□□□ -0.02
TPM4-202ENST00000344824 UPP1Q16831 310 aa14.93□□□□□ -0.02
TPM4-202ENST00000344824 KIAA0319Q5VV43 1072 aa14.93□□□□□ -0.02
TPM4-202ENST00000344824 SLFN12LQ6IEE8 588 aa14.93□□□□□ -0.02
TPM4-202ENST00000344824 CES5AQ6NT32 575 aa14.93□□□□□ -0.02
TPM4-202ENST00000344824 SYCE2Q6PIF2 218 aa14.93□□□□□ -0.02
TPM4-202ENST00000344824 ALKAL1Q6UXT8 129 aa14.93□□□□□ -0.02
TPM4-202ENST00000344824 CSGALNACT2Q8N6G5 542 aa14.93□□□□□ -0.02
TPM4-202ENST00000344824 SAAL1Q96ER3 474 aa14.93□□□□□ -0.02
TPM4-202ENST00000344824 FBXL18Q96ME1 805 aa14.93□□□□□ -0.02
TPM4-202ENST00000344824 SRRTQ9BXP5 876 aaKnown RBP14.93□□□□□ -0.02
TPM4-202ENST00000344824 TMEM206Q9H813 350 aa14.93□□□□□ -0.02
TPM4-202ENST00000344824 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.93□□□□□ -0.021e-6■□□□□ 8.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms