RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 RPL9P32969 192 aaKnown RBP15.7■□□□□ 0.1
HMGN3-202ENST00000344726 ABCD1P33897 745 aa15.7■□□□□ 0.1
HMGN3-202ENST00000344726 VASPP50552 380 aaPredicted RBP15.7■□□□□ 0.1
HMGN3-202ENST00000344726 PPP2R3AQ06190 1150 aa15.7■□□□□ 0.1
HMGN3-202ENST00000344726 RAB33AQ14088 237 aa15.7■□□□□ 0.1
HMGN3-202ENST00000344726 CYP26C1Q6V0L0 522 aa15.7■□□□□ 0.1
HMGN3-202ENST00000344726 UBALD2Q8IYN6 164 aa15.7■□□□□ 0.1
HMGN3-202ENST00000344726 ST13P5Q8NFI4 369 aaPredicted RBP15.7■□□□□ 0.1
HMGN3-202ENST00000344726 DHX58Q96C10 678 aa15.7■□□□□ 0.1
HMGN3-202ENST00000344726 ACSF2Q96CM8 615 aaPredicted RBP15.7■□□□□ 0.1
HMGN3-202ENST00000344726 HVCN1Q96D96 273 aa15.7■□□□□ 0.1
HMGN3-202ENST00000344726 RPF1Q9H9Y2 349 aaKnown RBP15.7■□□□□ 0.1
HMGN3-202ENST00000344726 OLFML3Q9NRN5 406 aa15.7■□□□□ 0.1
HMGN3-202ENST00000344726 KBTBD4Q9NVX7 518 aa15.7■□□□□ 0.1
HMGN3-202ENST00000344726 PPEF2O14830 753 aa15.69■□□□□ 0.1
HMGN3-202ENST00000344726 TRAPPC3O43617 180 aa15.69■□□□□ 0.1
HMGN3-202ENST00000344726 NARSO43776 548 aaKnown RBP15.69■□□□□ 0.1
HMGN3-202ENST00000344726 TBC1D4O60343 1298 aa15.69■□□□□ 0.1
HMGN3-202ENST00000344726 LRPAP1P30533 357 aa15.69■□□□□ 0.1
HMGN3-202ENST00000344726 ACOT2P49753 483 aa15.69■□□□□ 0.1
HMGN3-202ENST00000344726 KYAT1Q16773 422 aa15.69■□□□□ 0.1
HMGN3-202ENST00000344726 VARS2Q5ST30 1063 aaKnown RBP15.69■□□□□ 0.1
HMGN3-202ENST00000344726 L1TD1Q5T7N2 865 aaKnown RBP15.69■□□□□ 0.1
HMGN3-202ENST00000344726 ADALQ6DHV7 355 aa15.69■□□□□ 0.1
HMGN3-202ENST00000344726 PDXDC1Q6P996 788 aa15.69■□□□□ 0.1
HMGN3-202ENST00000344726 CRELD2Q6UXH1 353 aaPredicted RBP15.69■□□□□ 0.1
HMGN3-202ENST00000344726 GET4Q7L5D6 327 aaPredicted RBP15.69■□□□□ 0.1
HMGN3-202ENST00000344726 GLIS3Q8NEA6 775 aa15.69■□□□□ 0.1
HMGN3-202ENST00000344726 ZSWIM2Q8NEG5 633 aa15.69■□□□□ 0.1
HMGN3-202ENST00000344726 SLC7A14Q8TBB6 771 aa15.69■□□□□ 0.1
HMGN3-202ENST00000344726 KCNG4Q8TDN1 519 aa15.69■□□□□ 0.1
HMGN3-202ENST00000344726 HPS3Q969F9 1004 aa15.69■□□□□ 0.1
HMGN3-202ENST00000344726 SUSD3Q96L08 255 aa15.69■□□□□ 0.1
HMGN3-202ENST00000344726 TNMDQ9H2S6 317 aa15.69■□□□□ 0.1
HMGN3-202ENST00000344726 PIDD1Q9HB75 910 aa15.69■□□□□ 0.1
HMGN3-202ENST00000344726 PANK4Q9NVE7 773 aa15.69■□□□□ 0.1
HMGN3-202ENST00000344726 EPS15L1Q9UBC2 864 aa15.69■□□□□ 0.1
HMGN3-202ENST00000344726 BACE2Q9Y5Z0 518 aa15.69■□□□□ 0.1
HMGN3-202ENST00000344726 CCL16O15467 120 aa15.68■□□□□ 0.1
HMGN3-202ENST00000344726 GCNT3O95395 438 aa15.68■□□□□ 0.1
HMGN3-202ENST00000344726 NFICP08651 508 aa15.68■□□□□ 0.1
HMGN3-202ENST00000344726 CYP3A5P20815 502 aa15.68■□□□□ 0.1
HMGN3-202ENST00000344726 GBP2P32456 591 aaPredicted RBP15.68■□□□□ 0.1
HMGN3-202ENST00000344726 ME1P48163 572 aa15.68■□□□□ 0.1
HMGN3-202ENST00000344726 ROR1Q01973 937 aa15.68■□□□□ 0.1
HMGN3-202ENST00000344726 NHLH1Q02575 133 aa15.68■□□□□ 0.1
HMGN3-202ENST00000344726 TCF15Q12870 199 aa15.68■□□□□ 0.1
HMGN3-202ENST00000344726 MRPL58Q14197 206 aaKnown RBP15.68■□□□□ 0.1
HMGN3-202ENST00000344726 PPM1LQ5SGD2 360 aa15.68■□□□□ 0.1
HMGN3-202ENST00000344726 ATL3Q6DD88 541 aa15.68■□□□□ 0.1
HMGN3-202ENST00000344726 JADE1Q6IE81 842 aa15.68■□□□□ 0.1
HMGN3-202ENST00000344726 SLC8B1Q6J4K2 584 aa15.68■□□□□ 0.1
HMGN3-202ENST00000344726 ELMSAN1Q6PJG2 1045 aa15.68■□□□□ 0.1
HMGN3-202ENST00000344726 ANKS3Q6ZW76 656 aa15.68■□□□□ 0.1
HMGN3-202ENST00000344726 GRASPQ7Z6J2 395 aaPredicted RBP15.68■□□□□ 0.1
HMGN3-202ENST00000344726 SUGP1Q8IWZ8 645 aaKnown RBP15.68■□□□□ 0.1
HMGN3-202ENST00000344726 FAM212AQ96EL1 285 aa15.68■□□□□ 0.1
HMGN3-202ENST00000344726 TRIM9Q9C026 710 aa15.68■□□□□ 0.1
HMGN3-202ENST00000344726 HCFC1R1Q9NWW0 138 aa15.68■□□□□ 0.1
HMGN3-202ENST00000344726 RCOR1Q9UKL0 485 aa15.68■□□□□ 0.1
HMGN3-202ENST00000344726 AGO2Q9UKV8 859 aaKnown RBP15.68■□□□□ 0.1
HMGN3-202ENST00000344726 UBQLN1Q9UMX0 589 aaKnown RBP15.68■□□□□ 0.1
HMGN3-202ENST00000344726 NUB1Q9Y5A7 615 aa15.68■□□□□ 0.1
HMGN3-202ENST00000344726 WDR27A2RRH5 827 aa15.67■□□□□ 0.1
HMGN3-202ENST00000344726 SYN3O14994 580 aa15.67■□□□□ 0.1
HMGN3-202ENST00000344726 POLR2DO15514 142 aaKnown RBP15.67■□□□□ 0.1
HMGN3-202ENST00000344726 PRPF6O94906 941 aaKnown RBP15.67■□□□□ 0.1
HMGN3-202ENST00000344726 HNRNPA1P09651 372 aaKnown RBP eCLIP15.67■□□□□ 0.1
HMGN3-202ENST00000344726 CASP1P29466 404 aa15.67■□□□□ 0.1
HMGN3-202ENST00000344726 AVPR2P30518 371 aa15.67■□□□□ 0.1
HMGN3-202ENST00000344726 MCM4P33991 863 aa15.67■□□□□ 0.1
HMGN3-202ENST00000344726 WNT7BP56706 349 aa15.67■□□□□ 0.1
HMGN3-202ENST00000344726 TDGQ13569 410 aa15.67■□□□□ 0.1
HMGN3-202ENST00000344726 LIN9Q5TKA1 542 aa15.67■□□□□ 0.1
HMGN3-202ENST00000344726 SPATA1Q5VX52 437 aa15.67■□□□□ 0.1
HMGN3-202ENST00000344726 RESP18Q5W5W9 173 aa15.67■□□□□ 0.1
HMGN3-202ENST00000344726 SLFN12LQ6IEE8 588 aa15.67■□□□□ 0.1
HMGN3-202ENST00000344726 IQUBQ8NA54 791 aa15.67■□□□□ 0.1
HMGN3-202ENST00000344726 POMGNT1Q8WZA1 660 aa15.67■□□□□ 0.1
HMGN3-202ENST00000344726 ACCSQ96QU6 501 aa15.67■□□□□ 0.1
HMGN3-202ENST00000344726 KCNH6Q9H252 994 aa15.67■□□□□ 0.1
HMGN3-202ENST00000344726 CUEDC2Q9H467 287 aa15.67■□□□□ 0.1
HMGN3-202ENST00000344726 DUSP12Q9UNI6 340 aa15.67■□□□□ 0.1
HMGN3-202ENST00000344726 MYO15AQ9UKN7 3530 aa15.67■□□□□ 0.1
HMGN3-202ENST00000344726 DMDP11532 3685 aa15.66■□□□□ 0.1
HMGN3-202ENST00000344726 M0QZQ0 153 aa15.66■□□□□ 0.1
HMGN3-202ENST00000344726 LAMP2P13473 410 aa15.66■□□□□ 0.1
HMGN3-202ENST00000344726 HOXA9P31269 272 aa15.66■□□□□ 0.1
HMGN3-202ENST00000344726 AARSP49588 968 aaKnown RBP eCLIP15.66■□□□□ 0.1
HMGN3-202ENST00000344726 CWF19L1Q69YN2 538 aaKnown RBP15.66■□□□□ 0.1
HMGN3-202ENST00000344726 CCDC65Q8IXS2 484 aa15.66■□□□□ 0.1
HMGN3-202ENST00000344726 TMEM105Q8N8V8 129 aa15.66■□□□□ 0.1
HMGN3-202ENST00000344726 ITFG1Q8TB96 612 aa15.66■□□□□ 0.1
HMGN3-202ENST00000344726 PHOX2BQ99453 314 aa15.66■□□□□ 0.1
HMGN3-202ENST00000344726 DNMT3BQ9UBC3 853 aaKnown RBP15.66■□□□□ 0.1
HMGN3-202ENST00000344726 FBXL5Q9UKA1 691 aa15.66■□□□□ 0.1
HMGN3-202ENST00000344726 CFAP45Q9UL16 551 aa15.66■□□□□ 0.1
HMGN3-202ENST00000344726 PCDHB13Q9Y5F0 798 aa15.66■□□□□ 0.1
HMGN3-202ENST00000344726 COL4A3Q01955 1670 aa15.66■□□□□ 0.1
HMGN3-202ENST00000344726 ANHXE9PGG2 379 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 110.2 ms