RNA–Protein interactions for RNA: ENST00000344129.2

CT55-202, Transcript of cancer/testis antigen 55, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CT55, Length 1,728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CT55-202ENST00000344129 SHC3Q92529 594 aa13.64□□□□□ -0.23
CT55-202ENST00000344129 SCLYQ96I15 445 aa13.64□□□□□ -0.23
CT55-202ENST00000344129 PPP1R12CQ9BZL4 782 aa13.64□□□□□ -0.23
CT55-202ENST00000344129 C11orf49Q9H6J7 331 aa13.64□□□□□ -0.23
CT55-202ENST00000344129 NXF1Q9UBU9 619 aaKnown RBP13.64□□□□□ -0.23
CT55-202ENST00000344129 ITGA11Q9UKX5 1188 aa13.64□□□□□ -0.23
CT55-202ENST00000344129 TFR2Q9UP52 801 aa13.64□□□□□ -0.23
CT55-202ENST00000344129 DERAQ9Y315 318 aa13.64□□□□□ -0.23
CT55-202ENST00000344129 FAM170AA1A519 330 aa13.63□□□□□ -0.23
CT55-202ENST00000344129 ZNF263O14978 683 aa13.63□□□□□ -0.23
CT55-202ENST00000344129 CCDC175P0C221 793 aa13.63□□□□□ -0.23
CT55-202ENST00000344129 MLH1P40692 756 aa13.63□□□□□ -0.23
CT55-202ENST00000344129 PRKCIP41743 596 aa13.63□□□□□ -0.23
CT55-202ENST00000344129 AFF1P51825 1210 aaKnown RBP13.63□□□□□ -0.23
CT55-202ENST00000344129 CCL23P55773 120 aa13.63□□□□□ -0.23
CT55-202ENST00000344129 GPNMBQ14956 572 aa13.63□□□□□ -0.23
CT55-202ENST00000344129 ZBTB6Q15916 424 aa13.63□□□□□ -0.23
CT55-202ENST00000344129 ASTE1Q2TB18 679 aaPredicted RBP13.63□□□□□ -0.23
CT55-202ENST00000344129 XKR4Q5GH76 650 aa13.63□□□□□ -0.23
CT55-202ENST00000344129 ENOSF1Q7L5Y1 443 aa13.63□□□□□ -0.23
CT55-202ENST00000344129 RTN4RL1Q86UN2 441 aaPredicted RBP13.63□□□□□ -0.23
CT55-202ENST00000344129 NT5DC4Q86YG4 428 aa13.63□□□□□ -0.23
CT55-202ENST00000344129 REXO1L1PQ8IX06 675 aa13.63□□□□□ -0.23
CT55-202ENST00000344129 FAM71AQ8IYT1 594 aa13.63□□□□□ -0.23
CT55-202ENST00000344129 BEST2Q8NFU1 509 aa13.63□□□□□ -0.23
CT55-202ENST00000344129 SLC20A1Q8WUM9 679 aa13.63□□□□□ -0.23
CT55-202ENST00000344129 LINC01599Q8WXQ3 324 aa13.63□□□□□ -0.23
CT55-202ENST00000344129 GAD1Q99259 594 aa13.63□□□□□ -0.23
CT55-202ENST00000344129 NIF3L1Q9GZT8 377 aa13.63□□□□□ -0.23
CT55-202ENST00000344129 HIPK3Q9H422 1215 aa13.63□□□□□ -0.23
CT55-202ENST00000344129 GOLGA2P5Q9HBQ8 144 aa13.63□□□□□ -0.23
CT55-202ENST00000344129 R3HCC1Q9Y3T6 440 aaKnown RBP13.63□□□□□ -0.23
CT55-202ENST00000344129 SSU72P8A0A1W2PR75 194 aa13.62□□□□□ -0.23
CT55-202ENST00000344129 EIF3CLB5ME19 914 aaKnown RBP13.62□□□□□ -0.23
CT55-202ENST00000344129 PTGESO14684 152 aa13.62□□□□□ -0.23
CT55-202ENST00000344129 ZSCAN12O43309 604 aa13.62□□□□□ -0.23
CT55-202ENST00000344129 OFD1O75665 1012 aa13.62□□□□□ -0.23
CT55-202ENST00000344129 KCNE1P15382 129 aa13.62□□□□□ -0.23
CT55-202ENST00000344129 ATF7P17544 494 aaPredicted RBP13.62□□□□□ -0.23
CT55-202ENST00000344129 CD58P19256 250 aa13.62□□□□□ -0.23
CT55-202ENST00000344129 ACO1P21399 889 aaKnown RBP13.62□□□□□ -0.23
CT55-202ENST00000344129 CYP2C18P33260 490 aa13.62□□□□□ -0.23
CT55-202ENST00000344129 CLCN1P35523 988 aa13.62□□□□□ -0.23
CT55-202ENST00000344129 RAP1GAPP47736 663 aa13.62□□□□□ -0.23
CT55-202ENST00000344129 RBP5P82980 135 aa13.62□□□□□ -0.23
CT55-202ENST00000344129 SOX4Q06945 474 aaPredicted RBP13.62□□□□□ -0.23
CT55-202ENST00000344129 AGMOQ6ZNB7 445 aa13.62□□□□□ -0.23
CT55-202ENST00000344129 MRPL10Q7Z7H8 261 aaKnown RBP13.62□□□□□ -0.23
CT55-202ENST00000344129 HACE1Q8IYU2 909 aa13.62□□□□□ -0.23
CT55-202ENST00000344129 HPDLQ96IR7 371 aa13.62□□□□□ -0.23
CT55-202ENST00000344129 EIF3CQ99613 913 aaKnown RBP13.62□□□□□ -0.23
CT55-202ENST00000344129 TMEM106CQ9BVX2 250 aa13.62□□□□□ -0.23
CT55-202ENST00000344129 MCOLN1Q9GZU1 580 aa13.62□□□□□ -0.23
CT55-202ENST00000344129 MIOSQ9NXC5 875 aa13.62□□□□□ -0.23
CT55-202ENST00000344129 ADAMTS1Q9UHI8 967 aa13.62□□□□□ -0.23
CT55-202ENST00000344129 UBQLN1Q9UMX0 589 aaKnown RBP13.62□□□□□ -0.23
CT55-202ENST00000344129 PCDHB4Q9Y5E5 795 aa13.62□□□□□ -0.23
CT55-202ENST00000344129 BZW2Q9Y6E2 419 aaKnown RBP13.62□□□□□ -0.23
CT55-202ENST00000344129 PDCD11Q14690 1871 aaKnown RBP13.62□□□□□ -0.23
CT55-202ENST00000344129 A0A087X0T9 212 aa13.61□□□□□ -0.23
CT55-202ENST00000344129 A0A0U1RQF3 1178 aa13.61□□□□□ -0.23
CT55-202ENST00000344129 PITPNM1O00562 1244 aa13.61□□□□□ -0.23
CT55-202ENST00000344129 WEE2P0C1S8 567 aa13.61□□□□□ -0.23
CT55-202ENST00000344129 FAM228BP0C875 321 aa13.61□□□□□ -0.23
CT55-202ENST00000344129 TBXAS1P24557 533 aaPredicted RBP13.61□□□□□ -0.23
CT55-202ENST00000344129 ASPAP45381 313 aa13.61□□□□□ -0.23
CT55-202ENST00000344129 RAB27AP51159 221 aa13.61□□□□□ -0.23
CT55-202ENST00000344129 LRRC26Q2I0M4 334 aa13.61□□□□□ -0.23
CT55-202ENST00000344129 TCTN1Q2MV58 587 aa13.61□□□□□ -0.23
CT55-202ENST00000344129 WDR72Q3MJ13 1102 aa13.61□□□□□ -0.23
CT55-202ENST00000344129 ZNF667Q5HYK9 610 aa13.61□□□□□ -0.23
CT55-202ENST00000344129 TAF3Q5VWG9 929 aa13.61□□□□□ -0.23
CT55-202ENST00000344129 SLC47A2Q86VL8 602 aa13.61□□□□□ -0.23
CT55-202ENST00000344129 DNAAF5Q86Y56 855 aa13.61□□□□□ -0.23
CT55-202ENST00000344129 ANKLE1Q8NAG6 615 aa13.61□□□□□ -0.23
CT55-202ENST00000344129 FAM81BQ96LP2 452 aa13.61□□□□□ -0.23
CT55-202ENST00000344129 C16orf45Q96MC5 204 aaPredicted RBP13.61□□□□□ -0.23
CT55-202ENST00000344129 LZTFL1Q9NQ48 299 aa13.61□□□□□ -0.23
CT55-202ENST00000344129 RGS18Q9NS28 235 aa13.61□□□□□ -0.23
CT55-202ENST00000344129 KCND1Q9NSA2 647 aa13.61□□□□□ -0.23
CT55-202ENST00000344129 SEPT11Q9NVA2 429 aaKnown RBP13.61□□□□□ -0.23
CT55-202ENST00000344129 PCDH10Q9P2E7 1040 aa13.61□□□□□ -0.23
CT55-202ENST00000344129 ARL5CA6NH57 179 aa13.61□□□□□ -0.23
CT55-202ENST00000344129 IPO7O95373 1038 aaKnown RBP13.61□□□□□ -0.23
CT55-202ENST00000344129 ABL1P00519 1130 aa13.61□□□□□ -0.23
CT55-202ENST00000344129 CCDC172P0C7W6 258 aa13.61□□□□□ -0.23
CT55-202ENST00000344129 ATICP31939 592 aa13.61□□□□□ -0.23
CT55-202ENST00000344129 SCNN1GP51170 649 aa13.61□□□□□ -0.23
CT55-202ENST00000344129 SPA17Q15506 151 aa13.61□□□□□ -0.23
CT55-202ENST00000344129 C9orf57Q5W0N0 161 aa13.61□□□□□ -0.23
CT55-202ENST00000344129 TMEM270Q6UE05 265 aa13.61□□□□□ -0.23
CT55-202ENST00000344129 NOP9Q86U38 636 aaKnown RBP13.61□□□□□ -0.23
CT55-202ENST00000344129 ECHDC2Q86YB7 292 aa13.61□□□□□ -0.23
CT55-202ENST00000344129 GSTCDQ8NEC7 633 aa13.61□□□□□ -0.23
CT55-202ENST00000344129 DBF4BQ8NFT6 615 aa13.61□□□□□ -0.23
CT55-202ENST00000344129 OLIG1Q8TAK6 271 aa13.61□□□□□ -0.23
CT55-202ENST00000344129 LNX1Q8TBB1 728 aaPredicted RBP13.61□□□□□ -0.23
CT55-202ENST00000344129 TAF4BQ92750 862 aa13.61□□□□□ -0.23
CT55-202ENST00000344129 TOX2Q96NM4 488 aa13.61□□□□□ -0.23
CT55-202ENST00000344129 PPP1R10Q96QC0 940 aaKnown RBP13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms