RNA–Protein interactions for RNA: ENST00000344063.6

RPL28-201, Transcript of ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL28, Length 4,796 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-201ENST00000344063 SERPINB12Q96P63 405 aa11.49□□□□□ -0.57
RPL28-201ENST00000344063 OSBPL8Q9BZF1 889 aa11.49□□□□□ -0.57
RPL28-201ENST00000344063 ZNF277Q9NRM2 450 aaPredicted RBP11.49□□□□□ -0.57
RPL28-201ENST00000344063 XRN1Q8IZH2 1706 aaKnown RBP11.49□□□□□ -0.57
RPL28-201ENST00000344063 NID2Q14112 1375 aa11.49□□□□□ -0.57
RPL28-201ENST00000344063 B2RBV5 119 aa11.49□□□□□ -0.57
RPL28-201ENST00000344063 HNRNPCL1O60812 293 aaKnown RBP11.49□□□□□ -0.57
RPL28-201ENST00000344063 GSTA1P08263 222 aa11.49□□□□□ -0.57
RPL28-201ENST00000344063 GZMAP12544 262 aa11.49□□□□□ -0.57
RPL28-201ENST00000344063 IL1R1P14778 569 aa11.49□□□□□ -0.57
RPL28-201ENST00000344063 TNFRSF8P28908 595 aa11.49□□□□□ -0.57
RPL28-201ENST00000344063 CENPCQ03188 943 aa11.49□□□□□ -0.57
RPL28-201ENST00000344063 SUPT20HL1Q3ZLR7 823 aa11.49□□□□□ -0.57
RPL28-201ENST00000344063 COBLL1Q53SF7 1204 aa11.49□□□□□ -0.57
RPL28-201ENST00000344063 ZNF677Q86XU0 584 aa11.49□□□□□ -0.57
RPL28-201ENST00000344063 FAM163AQ96GL9 167 aaPredicted RBP11.49□□□□□ -0.57
RPL28-201ENST00000344063 THEGQ9P2T0 379 aa11.49□□□□□ -0.57
RPL28-201ENST00000344063 SLC9A2Q9UBY0 812 aa11.49□□□□□ -0.57
RPL28-201ENST00000344063 GOLGA8QA0A0J9YX86 632 aa11.49□□□□□ -0.57
RPL28-201ENST00000344063 GOLGA8OA6NCC3 632 aa11.49□□□□□ -0.57
RPL28-201ENST00000344063 GOLGA8NF8WBI6 632 aa11.49□□□□□ -0.57
RPL28-201ENST00000344063 H3BRJ5 948 aa11.49□□□□□ -0.57
RPL28-201ENST00000344063 CCDC22O60826 627 aa11.49□□□□□ -0.57
RPL28-201ENST00000344063 SUPT3HO75486 399 aa11.49□□□□□ -0.57
RPL28-201ENST00000344063 RARGP13631 454 aa11.49□□□□□ -0.57
RPL28-201ENST00000344063 VHLP40337 213 aa11.49□□□□□ -0.57
RPL28-201ENST00000344063 RFC5P40937 340 aa11.49□□□□□ -0.57
RPL28-201ENST00000344063 CYTH1Q15438 398 aa11.49□□□□□ -0.57
RPL28-201ENST00000344063 HIF1AQ16665 826 aa11.49□□□□□ -0.57
RPL28-201ENST00000344063 AGR3Q8TD06 166 aa11.49□□□□□ -0.57
RPL28-201ENST00000344063 CCDC97Q96F63 343 aaPredicted RBP11.49□□□□□ -0.57
RPL28-201ENST00000344063 NUDT12Q9BQG2 462 aa11.49□□□□□ -0.57
RPL28-201ENST00000344063 MED10Q9BTT4 135 aa11.49□□□□□ -0.57
RPL28-201ENST00000344063 MRPL46Q9H2W6 279 aaKnown RBP11.49□□□□□ -0.57
RPL28-201ENST00000344063 MID2Q9UJV3 735 aa11.49□□□□□ -0.57
RPL28-201ENST00000344063 AKT3Q9Y243 479 aa11.49□□□□□ -0.57
RPL28-201ENST00000344063 SHBGP04278 402 aa11.48□□□□□ -0.57
RPL28-201ENST00000344063 ESRRGP62508 458 aa11.48□□□□□ -0.57
RPL28-201ENST00000344063 P3H1Q32P28 736 aa11.48□□□□□ -0.57
RPL28-201ENST00000344063 PDZD8Q8NEN9 1154 aa11.48□□□□□ -0.57
RPL28-201ENST00000344063 SHCBP1LQ9BZQ2 653 aa11.48□□□□□ -0.57
RPL28-201ENST00000344063 SLC38A10Q9HBR0 1119 aa11.48□□□□□ -0.57
RPL28-201ENST00000344063 ZNF302Q9NR11 478 aa11.48□□□□□ -0.57
RPL28-201ENST00000344063 TACC3Q9Y6A5 838 aa11.48□□□□□ -0.57
RPL28-201ENST00000344063 F5H423 210 aaPredicted RBP11.48□□□□□ -0.57
RPL28-201ENST00000344063 GHRP10912 638 aa11.48□□□□□ -0.57
RPL28-201ENST00000344063 PTENP60484 403 aa11.48□□□□□ -0.57
RPL28-201ENST00000344063 PSMC1P62191 440 aaKnown RBP11.48□□□□□ -0.57
RPL28-201ENST00000344063 MED21Q13503 144 aa11.48□□□□□ -0.57
RPL28-201ENST00000344063 KCNV1Q6PIU1 500 aa11.48□□□□□ -0.57
RPL28-201ENST00000344063 FOXR2Q6PJQ5 311 aa11.48□□□□□ -0.57
RPL28-201ENST00000344063 LVRNQ6Q4G3 990 aa11.48□□□□□ -0.57
RPL28-201ENST00000344063 YTHDF3Q7Z739 585 aaKnown RBP11.48□□□□□ -0.57
RPL28-201ENST00000344063 IRF2BP1Q8IU81 584 aa11.48□□□□□ -0.57
RPL28-201ENST00000344063 ARHGAP18Q8N392 663 aa11.48□□□□□ -0.57
RPL28-201ENST00000344063 PSPC1Q8WXF1 523 aaKnown RBP11.48□□□□□ -0.57
RPL28-201ENST00000344063 LPAR1Q92633 364 aa11.48□□□□□ -0.57
RPL28-201ENST00000344063 NLRP4Q96MN2 994 aa11.48□□□□□ -0.57
RPL28-201ENST00000344063 OLFM3Q96PB7 478 aa11.48□□□□□ -0.57
RPL28-201ENST00000344063 DNAJC5Q9H3Z4 198 aa11.48□□□□□ -0.57
RPL28-201ENST00000344063 ANKEF1Q9NU02 776 aa11.48□□□□□ -0.57
RPL28-201ENST00000344063 FBXO40Q9UH90 709 aa11.48□□□□□ -0.57
RPL28-201ENST00000344063 PHTF1Q9UMS5 762 aa11.48□□□□□ -0.57
RPL28-201ENST00000344063 NRXN3Q9Y4C0 1643 aa11.48□□□□□ -0.57
RPL28-201ENST00000344063 WNT7AO00755 349 aa11.48□□□□□ -0.57
RPL28-201ENST00000344063 WDR46O15213 610 aaKnown RBP11.48□□□□□ -0.57
RPL28-201ENST00000344063 ATP6V1B1P15313 513 aa11.48□□□□□ -0.57
RPL28-201ENST00000344063 CCNHP51946 323 aaPredicted RBP11.48□□□□□ -0.57
RPL28-201ENST00000344063 ISLR2Q6UXK2 745 aa11.48□□□□□ -0.57
RPL28-201ENST00000344063 LRRC55Q6ZSA7 311 aa11.48□□□□□ -0.57
RPL28-201ENST00000344063 B4GALNT2Q8NHY0 566 aa11.48□□□□□ -0.57
RPL28-201ENST00000344063 SH3GL2Q99962 352 aa11.48□□□□□ -0.57
RPL28-201ENST00000344063 TMEM117Q9H0C3 514 aa11.48□□□□□ -0.57
RPL28-201ENST00000344063 PNMA3Q9UL41 463 aa11.48□□□□□ -0.57
RPL28-201ENST00000344063 MRC1P22897 1456 aa11.48□□□□□ -0.57
RPL28-201ENST00000344063 EPC2Q52LR7 807 aa11.48□□□□□ -0.57
RPL28-201ENST00000344063 CCNYQ8ND76 341 aa11.48□□□□□ -0.57
RPL28-201ENST00000344063 DEPDC1BQ8WUY9 529 aa11.48□□□□□ -0.57
RPL28-201ENST00000344063 GMCL1Q96IK5 515 aa11.48□□□□□ -0.57
RPL28-201ENST00000344063 SENP7Q9BQF6 1050 aa11.48□□□□□ -0.57
RPL28-201ENST00000344063 C2orf40Q9H1Z8 148 aa11.48□□□□□ -0.57
RPL28-201ENST00000344063 CDC42EP4Q9H3Q1 356 aaKnown RBP11.48□□□□□ -0.57
RPL28-201ENST00000344063 FAM96AQ9H5X1 160 aa11.48□□□□□ -0.57
RPL28-201ENST00000344063 DNAJC8O75937 253 aaPredicted RBP11.47□□□□□ -0.57
RPL28-201ENST00000344063 DUOXA2Q1HG44 320 aa11.47□□□□□ -0.57
RPL28-201ENST00000344063 TMEM259Q4ZIN3 620 aa11.47□□□□□ -0.57
RPL28-201ENST00000344063 XKR3Q5GH77 459 aa11.47□□□□□ -0.57
RPL28-201ENST00000344063 ZNF720Q7Z2F6 126 aa11.47□□□□□ -0.57
RPL28-201ENST00000344063 KCNK18Q7Z418 384 aa11.47□□□□□ -0.57
RPL28-201ENST00000344063 CPA5Q8WXQ8 436 aa11.47□□□□□ -0.57
RPL28-201ENST00000344063 ALKBH8Q96BT7 664 aaKnown RBP11.47□□□□□ -0.57
RPL28-201ENST00000344063 MTBPQ96DY7 904 aa11.47□□□□□ -0.57
RPL28-201ENST00000344063 TSSK1BQ9BXA7 367 aa11.47□□□□□ -0.57
RPL28-201ENST00000344063 MRPL4Q9BYD3 311 aaKnown RBP11.47□□□□□ -0.57
RPL28-201ENST00000344063 ZCWPW1Q9H0M4 648 aa11.47□□□□□ -0.57
RPL28-201ENST00000344063 LZTS1Q9Y250 596 aa11.47□□□□□ -0.57
RPL28-201ENST00000344063 DNM1LO00429 736 aa11.47□□□□□ -0.57
RPL28-201ENST00000344063 EPHB2P29323 1055 aa11.47□□□□□ -0.57
RPL28-201ENST00000344063 GPC3P51654 580 aa11.47□□□□□ -0.57
RPL28-201ENST00000344063 TRIP10Q15642 601 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms