RNA–Protein interactions for RNA: ENST00000341394.8

CAPRIN1-201, Transcript of cell cycle associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CAPRIN1, Length 4,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-201ENST00000341394 TRIM59Q8IWR1 403 aa11.1□□□□□ -0.63
CAPRIN1-201ENST00000341394 FBXO25Q8TCJ0 367 aa11.1□□□□□ -0.63
CAPRIN1-201ENST00000341394 GTF3C2Q8WUA4 911 aaPredicted RBP11.1□□□□□ -0.63
CAPRIN1-201ENST00000341394 HNRNPLLQ8WVV9 542 aaKnown RBP11.1□□□□□ -0.63
CAPRIN1-201ENST00000341394 C18orf8Q96DM3 657 aa11.1□□□□□ -0.63
CAPRIN1-201ENST00000341394 TRIM4Q9C037 500 aa11.1□□□□□ -0.63
CAPRIN1-201ENST00000341394 FRMPD4Q14CM0 1322 aa11.1□□□□□ -0.63
CAPRIN1-201ENST00000341394 MAP2K7O14733 419 aa11.1□□□□□ -0.63
CAPRIN1-201ENST00000341394 CCNE2O96020 404 aa11.1□□□□□ -0.63
CAPRIN1-201ENST00000341394 FERP16591 822 aa11.1□□□□□ -0.63
CAPRIN1-201ENST00000341394 MARK3P27448 753 aa11.1□□□□□ -0.63
CAPRIN1-201ENST00000341394 ACTR2P61160 394 aa11.1□□□□□ -0.63
CAPRIN1-201ENST00000341394 IFI35P80217 286 aaPredicted RBP11.1□□□□□ -0.63
CAPRIN1-201ENST00000341394 LRRC63Q05C16 580 aa11.1□□□□□ -0.63
CAPRIN1-201ENST00000341394 DNAJC3Q13217 504 aa11.1□□□□□ -0.63
CAPRIN1-201ENST00000341394 GPAT2Q6NUI2 795 aa11.1□□□□□ -0.63
CAPRIN1-201ENST00000341394 ZBTB33Q86T24 672 aa11.1□□□□□ -0.63
CAPRIN1-201ENST00000341394 MIPOL1Q8TD10 442 aa11.1□□□□□ -0.63
CAPRIN1-201ENST00000341394 SLC13A1Q9BZW2 595 aa11.1□□□□□ -0.63
CAPRIN1-201ENST00000341394 REXO2Q9Y3B8 237 aaKnown RBP11.1□□□□□ -0.63
CAPRIN1-201ENST00000341394 IGF2BP3O00425 579 aaKnown RBP eCLIP11.1□□□□□ -0.633e-6■■■□□ 16.9
CAPRIN1-201ENST00000341394 SLC16A4O15374 487 aa11.1□□□□□ -0.63
CAPRIN1-201ENST00000341394 CNMDO75829 334 aa11.1□□□□□ -0.63
CAPRIN1-201ENST00000341394 TROVE2P10155 538 aaKnown RBP eCLIP11.1□□□□□ -0.633e-6■■□□□ 11.8
CAPRIN1-201ENST00000341394 TXNP10599 105 aaKnown RBP11.1□□□□□ -0.63
CAPRIN1-201ENST00000341394 HOXD13P35453 343 aa11.1□□□□□ -0.63
CAPRIN1-201ENST00000341394 IL9RQ01113 521 aa11.1□□□□□ -0.63
CAPRIN1-201ENST00000341394 TMEM63BQ5T3F8 832 aa11.1□□□□□ -0.63
CAPRIN1-201ENST00000341394 RGMBQ6NW40 437 aa11.1□□□□□ -0.63
CAPRIN1-201ENST00000341394 FBXO16Q8IX29 292 aaPredicted RBP11.1□□□□□ -0.63
CAPRIN1-201ENST00000341394 INPP4AQ96PE3 977 aaPredicted RBP11.1□□□□□ -0.63
CAPRIN1-201ENST00000341394 PI4K2AQ9BTU6 479 aa11.1□□□□□ -0.63
CAPRIN1-201ENST00000341394 SLC5A4Q9NY91 659 aa11.1□□□□□ -0.63
CAPRIN1-201ENST00000341394 NOP53Q9NZM5 478 aaKnown RBP11.1□□□□□ -0.63
CAPRIN1-201ENST00000341394 PCDHB4Q9Y5E5 795 aa11.1□□□□□ -0.63
CAPRIN1-201ENST00000341394 CCDC78A2IDD5 438 aa11.09□□□□□ -0.63
CAPRIN1-201ENST00000341394 EME2A4GXA9 379 aaPredicted RBP11.09□□□□□ -0.63
CAPRIN1-201ENST00000341394 SLC26A4O43511 780 aa11.09□□□□□ -0.63
CAPRIN1-201ENST00000341394 STAM2O75886 525 aa11.09□□□□□ -0.63
CAPRIN1-201ENST00000341394 MXI1P50539 228 aa11.09□□□□□ -0.63
CAPRIN1-201ENST00000341394 SP2Q02086 613 aa11.09□□□□□ -0.63
CAPRIN1-201ENST00000341394 GIT2Q14161 759 aa11.09□□□□□ -0.63
CAPRIN1-201ENST00000341394 SLC18A3Q16572 532 aa11.09□□□□□ -0.63
CAPRIN1-201ENST00000341394 CST9Q5W186 159 aa11.09□□□□□ -0.63
CAPRIN1-201ENST00000341394 CAPRIN2Q6IMN6 1127 aaKnown RBP11.09□□□□□ -0.63
CAPRIN1-201ENST00000341394 PBKQ96KB5 322 aa11.09□□□□□ -0.63
CAPRIN1-201ENST00000341394 CNOT8Q9UFF9 292 aaKnown RBP11.09□□□□□ -0.63
CAPRIN1-201ENST00000341394 LRRC37A2A6NM11 1700 aa11.09□□□□□ -0.63
CAPRIN1-201ENST00000341394 MYH9P35579 1960 aaKnown RBP11.09□□□□□ -0.63
CAPRIN1-201ENST00000341394 SOWAHBA6NEL2 793 aa11.09□□□□□ -0.63
CAPRIN1-201ENST00000341394 ADORA2AP29274 412 aa11.09□□□□□ -0.63
CAPRIN1-201ENST00000341394 LIN9Q5TKA1 542 aa11.09□□□□□ -0.63
CAPRIN1-201ENST00000341394 WDR59Q6PJI9 974 aa11.09□□□□□ -0.63
CAPRIN1-201ENST00000341394 NUDCD1Q96RS6 583 aa11.09□□□□□ -0.63
CAPRIN1-201ENST00000341394 TLR10Q9BXR5 811 aa11.09□□□□□ -0.63
CAPRIN1-201ENST00000341394 KIF9Q9HAQ2 790 aa11.09□□□□□ -0.63
CAPRIN1-201ENST00000341394 A0A1W2PQC6 194 aa11.09□□□□□ -0.63
CAPRIN1-201ENST00000341394 ASB14A6NK59 587 aa11.09□□□□□ -0.63
CAPRIN1-201ENST00000341394 H7C0C1 242 aa11.09□□□□□ -0.63
CAPRIN1-201ENST00000341394 ZBTB48P10074 688 aaPredicted RBP11.09□□□□□ -0.63
CAPRIN1-201ENST00000341394 GAP43P17677 238 aa11.09□□□□□ -0.63
CAPRIN1-201ENST00000341394 ATP5OP48047 213 aa11.09□□□□□ -0.63
CAPRIN1-201ENST00000341394 IGBP1P78318 339 aa11.09□□□□□ -0.63
CAPRIN1-201ENST00000341394 LY6KQ17RY6 165 aa11.09□□□□□ -0.63
CAPRIN1-201ENST00000341394 GUF1Q8N442 669 aaKnown RBP11.09□□□□□ -0.63
CAPRIN1-201ENST00000341394 CFAP36Q96G28 342 aa11.09□□□□□ -0.63
CAPRIN1-201ENST00000341394 ATXN7L3BQ96GX2 97 aa11.09□□□□□ -0.63
CAPRIN1-201ENST00000341394 ZNF302Q9NR11 478 aa11.09□□□□□ -0.63
CAPRIN1-201ENST00000341394 TOM1L1O75674 476 aa11.08□□□□□ -0.64
CAPRIN1-201ENST00000341394 TARSP26639 723 aaKnown RBP11.08□□□□□ -0.64
CAPRIN1-201ENST00000341394 POLGP54098 1239 aaPredicted RBP11.08□□□□□ -0.64
CAPRIN1-201ENST00000341394 DAB2IPQ5VWQ8 1189 aa11.08□□□□□ -0.64
CAPRIN1-201ENST00000341394 CREG2Q8IUH2 290 aa11.08□□□□□ -0.64
CAPRIN1-201ENST00000341394 CPA5Q8WXQ8 436 aa11.08□□□□□ -0.64
CAPRIN1-201ENST00000341394 ERP27Q96DN0 273 aa11.08□□□□□ -0.64
CAPRIN1-201ENST00000341394 SEMA4AQ9H3S1 761 aa11.08□□□□□ -0.64
CAPRIN1-201ENST00000341394 ANLNQ9NQW6 1124 aa11.08□□□□□ -0.64
CAPRIN1-201ENST00000341394 I3L4J1 428 aa11.08□□□□□ -0.64
CAPRIN1-201ENST00000341394 ATP2A2P16615 1042 aaKnown RBP11.08□□□□□ -0.64
CAPRIN1-201ENST00000341394 KDSRQ06136 332 aa11.08□□□□□ -0.64
CAPRIN1-201ENST00000341394 IFRD2Q12894 506 aaPredicted RBP11.08□□□□□ -0.64
CAPRIN1-201ENST00000341394 ANKRD23Q86SG2 305 aa11.08□□□□□ -0.64
CAPRIN1-201ENST00000341394 PRUNE1Q86TP1 453 aa11.08□□□□□ -0.64
CAPRIN1-201ENST00000341394 USP38Q8NB14 1042 aa11.08□□□□□ -0.64
CAPRIN1-201ENST00000341394 PWWP2AQ96N64 755 aa11.08□□□□□ -0.64
CAPRIN1-201ENST00000341394 XPO6Q96QU8 1125 aaKnown RBP11.08□□□□□ -0.64
CAPRIN1-201ENST00000341394 MKNK1Q9BUB5 465 aa11.08□□□□□ -0.64
CAPRIN1-201ENST00000341394 NUP85Q9BW27 656 aa11.08□□□□□ -0.64
CAPRIN1-201ENST00000341394 NOD2Q9HC29 1040 aa11.08□□□□□ -0.64
CAPRIN1-201ENST00000341394 C1orf112Q9NSG2 853 aa11.08□□□□□ -0.64
CAPRIN1-201ENST00000341394 PSD3Q9NYI0 1048 aa11.08□□□□□ -0.64
CAPRIN1-201ENST00000341394 PPARGC1AQ9UBK2 798 aaKnown RBP11.08□□□□□ -0.64
CAPRIN1-201ENST00000341394 PLAGL2Q9UPG8 496 aa11.08□□□□□ -0.64
CAPRIN1-201ENST00000341394 TMEM120BA0PK00 339 aa11.08□□□□□ -0.64
CAPRIN1-201ENST00000341394 MANSC4A6NHS7 340 aaPredicted RBP11.08□□□□□ -0.64
CAPRIN1-201ENST00000341394 PBX1P40424 430 aa11.08□□□□□ -0.64
CAPRIN1-201ENST00000341394 ITIH3Q06033 890 aa11.08□□□□□ -0.64
CAPRIN1-201ENST00000341394 CUL1Q13616 776 aa11.08□□□□□ -0.64
CAPRIN1-201ENST00000341394 TTLL4Q14679 1199 aa11.08□□□□□ -0.64
CAPRIN1-201ENST00000341394 EML3Q32P44 896 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms