RNA–Protein interactions for RNA: ENST00000341316.6

SPG7-202, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 1 (best) BASIC

Gene SPG7, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-202ENST00000341316 FAM189A1O60320 539 aa21.44■■□□□ 1.02
SPG7-202ENST00000341316 BPIFB4P59827 614 aa21.44■■□□□ 1.02
SPG7-202ENST00000341316 NOP14P78316 857 aaKnown RBP21.44■■□□□ 1.02
SPG7-202ENST00000341316 NEDD9Q14511 834 aa21.44■■□□□ 1.02
SPG7-202ENST00000341316 ODF2Q5BJF6 829 aa21.44■■□□□ 1.02
SPG7-202ENST00000341316 AGBL2Q5U5Z8 902 aa21.44■■□□□ 1.02
SPG7-202ENST00000341316 CCDC105Q8IYK2 499 aa21.44■■□□□ 1.02
SPG7-202ENST00000341316 SEPT1Q8WYJ6 367 aa21.44■■□□□ 1.02
SPG7-202ENST00000341316 OTUD5Q96G74 571 aa21.44■■□□□ 1.02
SPG7-202ENST00000341316 CLMNQ96JQ2 1002 aa21.44■■□□□ 1.02
SPG7-202ENST00000341316 FGD4Q96M96 766 aa21.44■■□□□ 1.02
SPG7-202ENST00000341316 MTUS1Q9ULD2 1270 aa21.44■■□□□ 1.02
SPG7-202ENST00000341316 CSADQ9Y600 493 aa21.44■■□□□ 1.02
SPG7-202ENST00000341316 O00370 1275 aa21.43■■□□□ 1.02
SPG7-202ENST00000341316 PODXLO00592 558 aa21.43■■□□□ 1.02
SPG7-202ENST00000341316 FSCN2O14926 492 aa21.43■■□□□ 1.02
SPG7-202ENST00000341316 CST3P01034 146 aaPredicted RBP21.43■■□□□ 1.02
SPG7-202ENST00000341316 PPP2R2AP63151 447 aa21.43■■□□□ 1.02
SPG7-202ENST00000341316 METTL7BQ6UX53 244 aa21.43■■□□□ 1.02
SPG7-202ENST00000341316 ZBTB33Q86T24 672 aa21.43■■□□□ 1.02
SPG7-202ENST00000341316 ABRAQ8N0Z2 381 aa21.43■■□□□ 1.02
SPG7-202ENST00000341316 C12orf50Q8NA57 414 aaPredicted RBP21.43■■□□□ 1.02
SPG7-202ENST00000341316 C1orf54Q8WWF1 131 aa21.43■■□□□ 1.02
SPG7-202ENST00000341316 RNF25Q96BH1 459 aaPredicted RBP21.43■■□□□ 1.02
SPG7-202ENST00000341316 C11orf70Q9BRQ4 267 aa21.43■■□□□ 1.02
SPG7-202ENST00000341316 OTOFQ9HC10 1997 aa21.43■■□□□ 1.02
SPG7-202ENST00000341316 PAPPA2Q9BXP8 1791 aa21.43■■□□□ 1.02
SPG7-202ENST00000341316 GMNCA6NCL1 334 aa21.43■■□□□ 1.02
SPG7-202ENST00000341316 MSCO60682 206 aa21.43■■□□□ 1.02
SPG7-202ENST00000341316 GNA15P30679 374 aa21.43■■□□□ 1.02
SPG7-202ENST00000341316 PMS2P54278 862 aa21.43■■□□□ 1.02
SPG7-202ENST00000341316 NOMO3P69849 1222 aa21.43■■□□□ 1.02
SPG7-202ENST00000341316 NCOA4Q13772 614 aa21.43■■□□□ 1.02
SPG7-202ENST00000341316 HSDL1Q3SXM5 330 aa21.43■■□□□ 1.02
SPG7-202ENST00000341316 FAM160B1Q5W0V3 765 aa21.43■■□□□ 1.02
SPG7-202ENST00000341316 MOB2Q70IA6 237 aa21.43■■□□□ 1.02
SPG7-202ENST00000341316 RBBP8NLQ8NC74 664 aaPredicted RBP21.43■■□□□ 1.02
SPG7-202ENST00000341316 ASCC2Q9H1I8 757 aaPredicted RBP21.43■■□□□ 1.02
SPG7-202ENST00000341316 LRRC19Q9H756 370 aa21.43■■□□□ 1.02
SPG7-202ENST00000341316 TXNRD2Q9NNW7 524 aa21.43■■□□□ 1.02
SPG7-202ENST00000341316 CNTN6Q9UQ52 1028 aa21.43■■□□□ 1.02
SPG7-202ENST00000341316 A0A0G2JLL6 359 aaPredicted RBP21.42■■□□□ 1.02
SPG7-202ENST00000341316 ZBTB42B2RXF5 422 aa21.42■■□□□ 1.02
SPG7-202ENST00000341316 TRAPPC3O43617 180 aa21.42■■□□□ 1.02
SPG7-202ENST00000341316 MYBL1P10243 752 aa21.42■■□□□ 1.02
SPG7-202ENST00000341316 KRT71Q3SY84 523 aa21.42■■□□□ 1.02
SPG7-202ENST00000341316 C6orf89Q6UWU4 347 aa21.42■■□□□ 1.02
SPG7-202ENST00000341316 PRRT2Q7Z6L0 340 aaPredicted RBP21.42■■□□□ 1.02
SPG7-202ENST00000341316 CCDC113Q9H0I3 377 aa21.42■■□□□ 1.02
SPG7-202ENST00000341316 PABPC3Q9H361 631 aaKnown RBP21.42■■□□□ 1.02
SPG7-202ENST00000341316 GGA2Q9UJY4 613 aa21.42■■□□□ 1.02
SPG7-202ENST00000341316 SRGAP2CP0DJJ0 459 aa21.41■■□□□ 1.02
SPG7-202ENST00000341316 TGFB3P10600 412 aa21.41■■□□□ 1.02
SPG7-202ENST00000341316 IRX3P78415 501 aaPredicted RBP21.41■■□□□ 1.02
SPG7-202ENST00000341316 SPDYCQ5MJ68 293 aa21.41■■□□□ 1.02
SPG7-202ENST00000341316 LRRC71Q8N4P6 559 aa21.41■■□□□ 1.02
SPG7-202ENST00000341316 DDX27Q96GQ7 796 aaKnown RBP21.41■■□□□ 1.02
SPG7-202ENST00000341316 GJB6O95452 261 aa21.41■■□□□ 1.02
SPG7-202ENST00000341316 MAGOHP61326 146 aaKnown RBP21.41■■□□□ 1.02
SPG7-202ENST00000341316 PTP4A2Q12974 167 aa21.41■■□□□ 1.02
SPG7-202ENST00000341316 SNX1Q13596 522 aa21.41■■□□□ 1.02
SPG7-202ENST00000341316 QPCTQ16769 361 aa21.41■■□□□ 1.02
SPG7-202ENST00000341316 TMEM63BQ5T3F8 832 aa21.41■■□□□ 1.02
SPG7-202ENST00000341316 BRSK2Q8IWQ3 736 aa21.41■■□□□ 1.02
SPG7-202ENST00000341316 ATG4AQ8WYN0 398 aa21.41■■□□□ 1.02
SPG7-202ENST00000341316 SEMA4AQ9H3S1 761 aa21.41■■□□□ 1.02
SPG7-202ENST00000341316 CHST7Q9NS84 486 aa21.41■■□□□ 1.02
SPG7-202ENST00000341316 LRRC37A2A6NM11 1700 aa21.41■■□□□ 1.02
SPG7-202ENST00000341316 TP73O15350 636 aa21.4■■□□□ 1.02
SPG7-202ENST00000341316 MNAT1P51948 309 aa21.4■■□□□ 1.02
SPG7-202ENST00000341316 MAMLD1Q13495 774 aa21.4■■□□□ 1.02
SPG7-202ENST00000341316 Q3C1V9 767 aa21.4■■□□□ 1.02
SPG7-202ENST00000341316 ZPBP2Q6X784 338 aa21.4■■□□□ 1.02
SPG7-202ENST00000341316 TRIM11Q96F44 468 aa21.4■■□□□ 1.02
SPG7-202ENST00000341316 GPR20Q99678 358 aa21.4■■□□□ 1.02
SPG7-202ENST00000341316 ADAM22Q9P0K1 906 aa21.4■■□□□ 1.02
SPG7-202ENST00000341316 DDX20Q9UHI6 824 aaKnown RBP21.4■■□□□ 1.02
SPG7-202ENST00000341316 ACTN3Q08043 901 aaPredicted RBP21.4■■□□□ 1.02
SPG7-202ENST00000341316 IFFO1Q0D2I5 559 aa21.4■■□□□ 1.02
SPG7-202ENST00000341316 LAMTOR4Q0VGL1 99 aa21.4■■□□□ 1.02
SPG7-202ENST00000341316 SGO2Q562F6 1265 aa21.4■■□□□ 1.02
SPG7-202ENST00000341316 ART4Q93070 314 aa21.4■■□□□ 1.02
SPG7-202ENST00000341316 ZNF668Q96K58 619 aaPredicted RBP21.4■■□□□ 1.02
SPG7-202ENST00000341316 CABS1Q96KC9 395 aa21.4■■□□□ 1.02
SPG7-202ENST00000341316 MTMR12Q9C0I1 747 aa21.4■■□□□ 1.02
SPG7-202ENST00000341316 ABLIM1O14639 778 aa21.39■■□□□ 1.02
SPG7-202ENST00000341316 THAP12O43422 761 aa21.39■■□□□ 1.02
SPG7-202ENST00000341316 CAND2O75155 1236 aa21.39■■□□□ 1.02
SPG7-202ENST00000341316 TOM1L1O75674 476 aa21.39■■□□□ 1.02
SPG7-202ENST00000341316 PROSCO94903 275 aa21.39■■□□□ 1.02
SPG7-202ENST00000341316 NUDT17P0C025 328 aa21.39■■□□□ 1.02
SPG7-202ENST00000341316 SLC1A1P43005 524 aa21.39■■□□□ 1.02
SPG7-202ENST00000341316 TAS2R40P59535 323 aa21.39■■□□□ 1.02
SPG7-202ENST00000341316 SLC29A2Q14542 456 aa21.39■■□□□ 1.02
SPG7-202ENST00000341316 SULF1Q8IWU6 871 aa21.39■■□□□ 1.02
SPG7-202ENST00000341316 UBR7Q8N806 425 aa21.39■■□□□ 1.02
SPG7-202ENST00000341316 RAPGEF5Q92565 580 aa21.39■■□□□ 1.02
SPG7-202ENST00000341316 DCPSQ96C86 337 aaKnown RBP21.39■■□□□ 1.02
SPG7-202ENST00000341316 ZBTB10Q96DT7 871 aa21.39■■□□□ 1.02
SPG7-202ENST00000341316 ACO2Q99798 780 aaKnown RBP21.39■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms