RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 I3L4J1 428 aa20.78■□□□□ 0.92
SYNE4-202ENST00000340477 MBTPS2O43462 519 aa20.78■□□□□ 0.92
SYNE4-202ENST00000340477 C1RP00736 705 aa20.78■□□□□ 0.92
SYNE4-202ENST00000340477 EPCAMP16422 314 aa20.78■□□□□ 0.92
SYNE4-202ENST00000340477 HOXD13P35453 343 aa20.78■□□□□ 0.92
SYNE4-202ENST00000340477 CYP2J2P51589 502 aa20.78■□□□□ 0.92
SYNE4-202ENST00000340477 TFAMQ00059 246 aaKnown RBP20.78■□□□□ 0.92
SYNE4-202ENST00000340477 KCNB1Q14721 858 aa20.78■□□□□ 0.92
SYNE4-202ENST00000340477 PRSS55Q6UWB4 352 aaPredicted RBP20.78■□□□□ 0.92
SYNE4-202ENST00000340477 GLYCTKQ8IVS8 523 aa20.78■□□□□ 0.92
SYNE4-202ENST00000340477 XXYLT1Q8NBI6 393 aa20.78■□□□□ 0.92
SYNE4-202ENST00000340477 KIAA0895Q8NCT3 520 aa20.78■□□□□ 0.92
SYNE4-202ENST00000340477 SLC22A17Q8WUG5 538 aa20.78■□□□□ 0.92
SYNE4-202ENST00000340477 SFXN1Q9H9B4 322 aa20.78■□□□□ 0.92
SYNE4-202ENST00000340477 H7C4K7 107 aa20.77■□□□□ 0.92
SYNE4-202ENST00000340477 CLIC2O15247 247 aa20.77■□□□□ 0.92
SYNE4-202ENST00000340477 TGFB1I1O43294 461 aa20.77■□□□□ 0.92
SYNE4-202ENST00000340477 TMEM191BP0C7N4 346 aa20.77■□□□□ 0.92
SYNE4-202ENST00000340477 TKTP29401 623 aaKnown RBP20.77■□□□□ 0.92
SYNE4-202ENST00000340477 GUCY2FP51841 1108 aa20.77■□□□□ 0.92
SYNE4-202ENST00000340477 ITIH3Q06033 890 aa20.77■□□□□ 0.92
SYNE4-202ENST00000340477 SNW1Q13573 536 aaKnown RBP20.77■□□□□ 0.92
SYNE4-202ENST00000340477 DSTYKQ6XUX3 929 aa20.77■□□□□ 0.92
SYNE4-202ENST00000340477 ENGASEQ8NFI3 743 aa20.77■□□□□ 0.92
SYNE4-202ENST00000340477 LNX1Q8TBB1 728 aaPredicted RBP20.77■□□□□ 0.92
SYNE4-202ENST00000340477 SUSD3Q96L08 255 aa20.77■□□□□ 0.92
SYNE4-202ENST00000340477 ZNF560Q96MR9 790 aa20.77■□□□□ 0.92
SYNE4-202ENST00000340477 POP1Q99575 1024 aaKnown RBP20.77■□□□□ 0.92
SYNE4-202ENST00000340477 GTPBP4Q9BZE4 634 aaKnown RBP20.77■□□□□ 0.92
SYNE4-202ENST00000340477 DPP3Q9NY33 737 aa20.77■□□□□ 0.92
SYNE4-202ENST00000340477 CALUO43852 315 aaPredicted RBP20.76■□□□□ 0.91
SYNE4-202ENST00000340477 EXOC3O60645 756 aa20.76■□□□□ 0.91
SYNE4-202ENST00000340477 IL9P15248 144 aa20.76■□□□□ 0.91
SYNE4-202ENST00000340477 RPL17P18621 184 aaKnown RBP20.76■□□□□ 0.91
SYNE4-202ENST00000340477 PNOCQ13519 176 aa20.76■□□□□ 0.91
SYNE4-202ENST00000340477 SMAD2Q15796 467 aaKnown RBP20.76■□□□□ 0.91
SYNE4-202ENST00000340477 SNRNP35Q16560 246 aaKnown RBP20.76■□□□□ 0.91
SYNE4-202ENST00000340477 C9orf57Q5W0N0 161 aa20.76■□□□□ 0.91
SYNE4-202ENST00000340477 PALB2Q86YC2 1186 aa20.76■□□□□ 0.91
SYNE4-202ENST00000340477 C12orf56Q8IXR9 622 aa20.76■□□□□ 0.91
SYNE4-202ENST00000340477 SMARCE1Q969G3 411 aa20.76■□□□□ 0.91
SYNE4-202ENST00000340477 ANKRD36BP1Q96IX9 119 aa20.76■□□□□ 0.91
SYNE4-202ENST00000340477 MAN1C1Q9NR34 630 aa20.76■□□□□ 0.91
SYNE4-202ENST00000340477 MTRRQ9UBK8 725 aa20.76■□□□□ 0.91
SYNE4-202ENST00000340477 PRKAG3Q9UGI9 489 aa20.76■□□□□ 0.91
SYNE4-202ENST00000340477 PCDHB8Q9UN66 801 aa20.76■□□□□ 0.91
SYNE4-202ENST00000340477 USP15Q9Y4E8 981 aaPredicted RBP20.76■□□□□ 0.91
SYNE4-202ENST00000340477 TNNC2P02585 160 aa20.75■□□□□ 0.91
SYNE4-202ENST00000340477 ODC1P11926 461 aa20.75■□□□□ 0.91
SYNE4-202ENST00000340477 UBE2HP62256 183 aa20.75■□□□□ 0.91
SYNE4-202ENST00000340477 VARS2Q5ST30 1063 aaKnown RBP20.75■□□□□ 0.91
SYNE4-202ENST00000340477 RARS2Q5T160 578 aaKnown RBP20.75■□□□□ 0.91
SYNE4-202ENST00000340477 LIN9Q5TKA1 542 aa20.75■□□□□ 0.91
SYNE4-202ENST00000340477 ZNF280DQ6N043 979 aa20.75■□□□□ 0.91
SYNE4-202ENST00000340477 CD300LGQ6UXG3 332 aa20.75■□□□□ 0.91
SYNE4-202ENST00000340477 USP37Q86T82 979 aa20.75■□□□□ 0.91
SYNE4-202ENST00000340477 CBWD2Q8IUF1 395 aa20.75■□□□□ 0.91
SYNE4-202ENST00000340477 EFCAB13Q8IY85 973 aa20.75■□□□□ 0.91
SYNE4-202ENST00000340477 ZSWIM2Q8NEG5 633 aa20.75■□□□□ 0.91
SYNE4-202ENST00000340477 HDAC7Q8WUI4 952 aa20.75■□□□□ 0.91
SYNE4-202ENST00000340477 RIPOR3Q96MK2 946 aa20.75■□□□□ 0.91
SYNE4-202ENST00000340477 NECTIN4Q96NY8 510 aa20.75■□□□□ 0.91
SYNE4-202ENST00000340477 GSDMAQ96QA5 445 aa20.75■□□□□ 0.91
SYNE4-202ENST00000340477 FNBP1Q96RU3 617 aa20.75■□□□□ 0.91
SYNE4-202ENST00000340477 APOL5Q9BWW9 433 aa20.75■□□□□ 0.91
SYNE4-202ENST00000340477 COL25A1Q9BXS0 654 aaPredicted RBP20.75■□□□□ 0.91
SYNE4-202ENST00000340477 PLEKHA4Q9H4M7 779 aa20.75■□□□□ 0.91
SYNE4-202ENST00000340477 BACE2Q9Y5Z0 518 aa20.75■□□□□ 0.91
SYNE4-202ENST00000340477 MTCL1Q9Y4B5 1905 aaKnown RBP20.74■□□□□ 0.91
SYNE4-202ENST00000340477 PDXKO00764 312 aa20.74■□□□□ 0.91
SYNE4-202ENST00000340477 PRPF40AO75400 957 aaKnown RBP20.74■□□□□ 0.91
SYNE4-202ENST00000340477 PNPLA4P41247 253 aa20.74■□□□□ 0.91
SYNE4-202ENST00000340477 TAF6P49848 677 aa20.74■□□□□ 0.91
SYNE4-202ENST00000340477 SV2CQ496J9 727 aa20.74■□□□□ 0.91
SYNE4-202ENST00000340477 SYCE2Q6PIF2 218 aa20.74■□□□□ 0.91
SYNE4-202ENST00000340477 IPO9Q96P70 1041 aaKnown RBP20.74■□□□□ 0.91
SYNE4-202ENST00000340477 ADAM7Q9H2U9 754 aa20.74■□□□□ 0.91
SYNE4-202ENST00000340477 PDE11AQ9HCR9 933 aa20.74■□□□□ 0.91
SYNE4-202ENST00000340477 ITGA11Q9UKX5 1188 aa20.74■□□□□ 0.91
SYNE4-202ENST00000340477 CDY1Q9Y6F8 540 aa20.74■□□□□ 0.91
SYNE4-202ENST00000340477 DLL1O00548 723 aa20.73■□□□□ 0.91
SYNE4-202ENST00000340477 TGM5O43548 720 aa20.73■□□□□ 0.91
SYNE4-202ENST00000340477 GADD45BO75293 160 aaPredicted RBP20.73■□□□□ 0.91
SYNE4-202ENST00000340477 OR1D2P34982 312 aa20.73■□□□□ 0.91
SYNE4-202ENST00000340477 MTHFRP42898 656 aa20.73■□□□□ 0.91
SYNE4-202ENST00000340477 CTXN3Q4LDR2 81 aa20.73■□□□□ 0.91
SYNE4-202ENST00000340477 WDR49Q8IV35 697 aa20.73■□□□□ 0.91
SYNE4-202ENST00000340477 ELOA2Q8IYF1 753 aaPredicted RBP20.73■□□□□ 0.91
SYNE4-202ENST00000340477 GUF1Q8N442 669 aaKnown RBP20.73■□□□□ 0.91
SYNE4-202ENST00000340477 RDH13Q8NBN7 331 aa20.73■□□□□ 0.91
SYNE4-202ENST00000340477 CLSTN3Q9BQT9 956 aa20.73■□□□□ 0.91
SYNE4-202ENST00000340477 OXCT2Q9BYC2 517 aaPredicted RBP20.73■□□□□ 0.91
SYNE4-202ENST00000340477 ANO9A1A5B4 782 aa20.72■□□□□ 0.91
SYNE4-202ENST00000340477 M0QZQ0 153 aa20.72■□□□□ 0.91
SYNE4-202ENST00000340477 PIRO00625 290 aa20.72■□□□□ 0.91
SYNE4-202ENST00000340477 NR3C1P04150 777 aa20.72■□□□□ 0.91
SYNE4-202ENST00000340477 KRT19P08727 400 aa20.72■□□□□ 0.91
SYNE4-202ENST00000340477 TNNI1P19237 187 aa20.72■□□□□ 0.91
SYNE4-202ENST00000340477 IGFBP6P24592 240 aaPredicted RBP20.72■□□□□ 0.91
SYNE4-202ENST00000340477 SSTR3P32745 418 aaPredicted RBP20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms