RNA–Protein interactions for RNA: ENST00000339987.7

SDCBP2-201, Transcript of syndecan binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDCBP2, Length 1,404 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP2-201ENST00000339987 ZC3H11AO75152 810 aaKnown RBP eCLIP19.25■□□□□ 0.67
SDCBP2-201ENST00000339987 ASS1P00966 412 aaKnown RBP19.25■□□□□ 0.67
SDCBP2-201ENST00000339987 KRT19P08727 400 aa19.25■□□□□ 0.67
SDCBP2-201ENST00000339987 PBX1P40424 430 aa19.25■□□□□ 0.67
SDCBP2-201ENST00000339987 PNPLA4P41247 253 aa19.25■□□□□ 0.67
SDCBP2-201ENST00000339987 ZNF75DP51815 510 aa19.25■□□□□ 0.67
SDCBP2-201ENST00000339987 KCNMA1Q12791 1236 aa19.25■□□□□ 0.67
SDCBP2-201ENST00000339987 UPP1Q16831 310 aa19.25■□□□□ 0.67
SDCBP2-201ENST00000339987 SGSM1Q2NKQ1 1148 aa19.25■□□□□ 0.67
SDCBP2-201ENST00000339987 TMEM130Q8N3G9 435 aa19.25■□□□□ 0.67
SDCBP2-201ENST00000339987 SP7Q8TDD2 431 aaPredicted RBP19.25■□□□□ 0.67
SDCBP2-201ENST00000339987 MRFAP1L1Q96HT8 127 aa19.25■□□□□ 0.67
SDCBP2-201ENST00000339987 ZNF560Q96MR9 790 aa19.25■□□□□ 0.67
SDCBP2-201ENST00000339987 CRACR2AQ9BSW2 395 aa19.25■□□□□ 0.67
SDCBP2-201ENST00000339987 INTS2Q9H0H0 1204 aaKnown RBP19.25■□□□□ 0.67
SDCBP2-201ENST00000339987 XYLT2Q9H1B5 865 aa19.25■□□□□ 0.67
SDCBP2-201ENST00000339987 CWH43Q9H720 699 aa19.25■□□□□ 0.67
SDCBP2-201ENST00000339987 VRTNQ9H8Y1 702 aa19.25■□□□□ 0.67
SDCBP2-201ENST00000339987 SIK3Q9Y2K2 1263 aa19.25■□□□□ 0.67
SDCBP2-201ENST00000339987 CEP290O15078 2479 aa19.25■□□□□ 0.67
SDCBP2-201ENST00000339987 CARNS1A5YM72 827 aa19.25■□□□□ 0.67
SDCBP2-201ENST00000339987 PPEF2O14830 753 aa19.25■□□□□ 0.67
SDCBP2-201ENST00000339987 TLL1O43897 1013 aa19.25■□□□□ 0.67
SDCBP2-201ENST00000339987 PAX3P23760 479 aa19.25■□□□□ 0.67
SDCBP2-201ENST00000339987 PON1P27169 355 aa19.25■□□□□ 0.67
SDCBP2-201ENST00000339987 CLCNKBP51801 687 aa19.25■□□□□ 0.67
SDCBP2-201ENST00000339987 MYL6P60660 151 aa19.25■□□□□ 0.67
SDCBP2-201ENST00000339987 SYCP1Q15431 976 aa19.25■□□□□ 0.67
SDCBP2-201ENST00000339987 SCARA3Q6AZY7 606 aa19.25■□□□□ 0.67
SDCBP2-201ENST00000339987 TRIM65Q6PJ69 517 aa19.25■□□□□ 0.67
SDCBP2-201ENST00000339987 CCDC150Q8NCX0 1101 aa19.25■□□□□ 0.67
SDCBP2-201ENST00000339987 IMPG2Q9BZV3 1241 aa19.25■□□□□ 0.67
SDCBP2-201ENST00000339987 DNAJB4Q9UDY4 337 aa19.25■□□□□ 0.67
SDCBP2-201ENST00000339987 TMEM189-UBE2V1I3L0A0 370 aa19.24■□□□□ 0.67
SDCBP2-201ENST00000339987 SLC9A1P19634 815 aa19.24■□□□□ 0.67
SDCBP2-201ENST00000339987 MYO1EQ12965 1108 aa19.24■□□□□ 0.67
SDCBP2-201ENST00000339987 ZNF699Q32M78 642 aa19.24■□□□□ 0.67
SDCBP2-201ENST00000339987 WDR44Q5JSH3 913 aa19.24■□□□□ 0.67
SDCBP2-201ENST00000339987 DCLRE1AQ6PJP8 1040 aa19.24■□□□□ 0.67
SDCBP2-201ENST00000339987 HPDLQ96IR7 371 aa19.24■□□□□ 0.67
SDCBP2-201ENST00000339987 PAAF1Q9BRP4 392 aa19.24■□□□□ 0.67
SDCBP2-201ENST00000339987 PLCB1Q9NQ66 1216 aa19.24■□□□□ 0.67
SDCBP2-201ENST00000339987 HCSTQ9UBK5 93 aa19.24■□□□□ 0.67
SDCBP2-201ENST00000339987 CACNG4Q9UBN1 327 aa19.24■□□□□ 0.67
SDCBP2-201ENST00000339987 MRPL42Q9Y6G3 142 aaKnown RBP19.24■□□□□ 0.67
SDCBP2-201ENST00000339987 ALDH2P05091 517 aa19.23■□□□□ 0.67
SDCBP2-201ENST00000339987 GALTP07902 379 aa19.23■□□□□ 0.67
SDCBP2-201ENST00000339987 LAG3P18627 525 aa19.23■□□□□ 0.67
SDCBP2-201ENST00000339987 SLC11A1P49279 550 aa19.23■□□□□ 0.67
SDCBP2-201ENST00000339987 TAF6P49848 677 aa19.23■□□□□ 0.67
SDCBP2-201ENST00000339987 NOP14P78316 857 aaKnown RBP19.23■□□□□ 0.67
SDCBP2-201ENST00000339987 SV2CQ496J9 727 aa19.23■□□□□ 0.67
SDCBP2-201ENST00000339987 DPY19L2P1Q6NXN4 242 aa19.23■□□□□ 0.67
SDCBP2-201ENST00000339987 FIBCD1Q8N539 461 aa19.23■□□□□ 0.67
SDCBP2-201ENST00000339987 FAXDC2Q96IV6 333 aa19.23■□□□□ 0.67
SDCBP2-201ENST00000339987 NT5C1BQ96P26 610 aa19.23■□□□□ 0.67
SDCBP2-201ENST00000339987 PI4K2AQ9BTU6 479 aa19.23■□□□□ 0.67
SDCBP2-201ENST00000339987 LSM14BQ9BX40 385 aaKnown RBP19.23■□□□□ 0.67
SDCBP2-201ENST00000339987 PRO3102Q9H379 93 aa19.23■□□□□ 0.67
SDCBP2-201ENST00000339987 SIX2Q9NPC8 291 aa19.23■□□□□ 0.67
SDCBP2-201ENST00000339987 NRP1O14786 923 aa19.22■□□□□ 0.67
SDCBP2-201ENST00000339987 LRRN2O75325 713 aa19.22■□□□□ 0.67
SDCBP2-201ENST00000339987 OR1G1P47890 313 aa19.22■□□□□ 0.67
SDCBP2-201ENST00000339987 AARSP49588 968 aaKnown RBP eCLIP19.22■□□□□ 0.67
SDCBP2-201ENST00000339987 BCAR1P56945 870 aa19.22■□□□□ 0.67
SDCBP2-201ENST00000339987 LILRA4P59901 499 aa19.22■□□□□ 0.67
SDCBP2-201ENST00000339987 CD300LGQ6UXG3 332 aa19.22■□□□□ 0.67
SDCBP2-201ENST00000339987 TDHQ8IZJ6 230 aa19.22■□□□□ 0.67
SDCBP2-201ENST00000339987 CLP1Q92989 425 aaKnown RBP19.22■□□□□ 0.67
SDCBP2-201ENST00000339987 COLEC11Q9BWP8 271 aa19.22■□□□□ 0.67
SDCBP2-201ENST00000339987 FAN1Q9Y2M0 1017 aa19.22■□□□□ 0.67
SDCBP2-201ENST00000339987 DAAM1Q9Y4D1 1078 aa19.22■□□□□ 0.67
SDCBP2-201ENST00000339987 PCDHA11Q9Y5I1 949 aa19.22■□□□□ 0.67
SDCBP2-201ENST00000339987 ITIH6Q6UXX5 1313 aa19.22■□□□□ 0.67
SDCBP2-201ENST00000339987 SCN1AP35498 2009 aa19.22■□□□□ 0.67
SDCBP2-201ENST00000339987 B3GAT3O94766 335 aa19.21■□□□□ 0.67
SDCBP2-201ENST00000339987 ADCY5O95622 1261 aa19.21■□□□□ 0.67
SDCBP2-201ENST00000339987 KLK7P49862 253 aa19.21■□□□□ 0.67
SDCBP2-201ENST00000339987 ZNF667Q5HYK9 610 aa19.21■□□□□ 0.67
SDCBP2-201ENST00000339987 FAM109BQ6ICB4 259 aaPredicted RBP19.21■□□□□ 0.67
SDCBP2-201ENST00000339987 VSTM4Q8IW00 320 aa19.21■□□□□ 0.67
SDCBP2-201ENST00000339987 C3orf58Q8NDZ4 430 aa19.21■□□□□ 0.67
SDCBP2-201ENST00000339987 PCMTD1Q96MG8 357 aaPredicted RBP19.21■□□□□ 0.67
SDCBP2-201ENST00000339987 ZNF558Q96NG5 402 aa19.21■□□□□ 0.67
SDCBP2-201ENST00000339987 NIF3L1Q9GZT8 377 aa19.21■□□□□ 0.67
SDCBP2-201ENST00000339987 APOBEC3GQ9HC16 384 aaKnown RBP19.21■□□□□ 0.67
SDCBP2-201ENST00000339987 AAASQ9NRG9 546 aa19.21■□□□□ 0.67
SDCBP2-201ENST00000339987 GDAP2Q9NXN4 497 aa19.21■□□□□ 0.67
SDCBP2-201ENST00000339987 APEX2Q9UBZ4 518 aa19.21■□□□□ 0.67
SDCBP2-201ENST00000339987 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.2■□□□□ 0.66
SDCBP2-201ENST00000339987 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.2■□□□□ 0.66
SDCBP2-201ENST00000339987 SPTLC1O15269 473 aa19.2■□□□□ 0.66
SDCBP2-201ENST00000339987 KIF4AO95239 1232 aa19.2■□□□□ 0.66
SDCBP2-201ENST00000339987 LINC00271P0C7V0 271 aa19.2■□□□□ 0.66
SDCBP2-201ENST00000339987 RFX1P22670 979 aa19.2■□□□□ 0.66
SDCBP2-201ENST00000339987 CDC25BP30305 580 aa19.2■□□□□ 0.66
SDCBP2-201ENST00000339987 ALDH7A1P49419 539 aaKnown RBP19.2■□□□□ 0.66
SDCBP2-201ENST00000339987 RABGGTBP53611 331 aa19.2■□□□□ 0.66
SDCBP2-201ENST00000339987 SPOUT1Q5T280 376 aaKnown RBP19.2■□□□□ 0.66
SDCBP2-201ENST00000339987 KLHDC7AQ5VTJ3 777 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms