RNA–Protein interactions for RNA: ENST00000339438.10

CSDE1-202, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,006 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-202ENST00000339438 CHMP2BQ9UQN3 213 aa5.95□□□□□ -1.46
CSDE1-202ENST00000339438 DDX3XO00571 662 aaKnown RBP eCLIP5.95□□□□□ -1.466e-27■■■□□ 16.5
CSDE1-202ENST00000339438 DDX3YO15523 660 aaKnown RBP5.95□□□□□ -1.46
CSDE1-202ENST00000339438 CA12O43570 354 aa5.95□□□□□ -1.46
CSDE1-202ENST00000339438 ZNF862O60290 1169 aa5.95□□□□□ -1.46
CSDE1-202ENST00000339438 ATP5HO75947 161 aa5.95□□□□□ -1.46
CSDE1-202ENST00000339438 CBX6O95503 412 aa5.95□□□□□ -1.46
CSDE1-202ENST00000339438 UBTFL6P0CB48 400 aaPredicted RBP5.95□□□□□ -1.46
CSDE1-202ENST00000339438 ZCCHC18P0CG32 403 aa5.95□□□□□ -1.46
CSDE1-202ENST00000339438 CETPP11597 493 aa5.95□□□□□ -1.46
CSDE1-202ENST00000339438 FCER1AP12319 257 aa5.95□□□□□ -1.46
CSDE1-202ENST00000339438 ALAS1P13196 640 aa5.95□□□□□ -1.46
CSDE1-202ENST00000339438 CRHR2Q13324 411 aa5.95□□□□□ -1.46
CSDE1-202ENST00000339438 ZRSR2Q15696 482 aaKnown RBP5.95□□□□□ -1.46
CSDE1-202ENST00000339438 PLEKHG4Q58EX7 1191 aa5.95□□□□□ -1.46
CSDE1-202ENST00000339438 RASIP1Q5U651 963 aa5.95□□□□□ -1.46
CSDE1-202ENST00000339438 FAM47EQ6ZV65 393 aa5.95□□□□□ -1.46
CSDE1-202ENST00000339438 NT5DC3Q86UY8 548 aa5.95□□□□□ -1.46
CSDE1-202ENST00000339438 SPATA24Q86W54 205 aa5.95□□□□□ -1.46
CSDE1-202ENST00000339438 TMTC2Q8N394 836 aa5.95□□□□□ -1.46
CSDE1-202ENST00000339438 ESR2Q92731 530 aa5.95□□□□□ -1.46
CSDE1-202ENST00000339438 ERP44Q9BS26 406 aa5.95□□□□□ -1.46
CSDE1-202ENST00000339438 EDEM3Q9BZQ6 932 aa5.95□□□□□ -1.46
CSDE1-202ENST00000339438 TUT1Q9H6E5 874 aaKnown RBP5.95□□□□□ -1.46
CSDE1-202ENST00000339438 HESX1Q9UBX0 185 aa5.95□□□□□ -1.46
CSDE1-202ENST00000339438 WASF2Q9Y6W5 498 aa5.95□□□□□ -1.46
CSDE1-202ENST00000339438 ATP8B3O60423 1300 aa5.95□□□□□ -1.46
CSDE1-202ENST00000339438 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.95□□□□□ -1.46
CSDE1-202ENST00000339438 RGS16O15492 202 aaPredicted RBP5.95□□□□□ -1.46
CSDE1-202ENST00000339438 AP1G1O43747 822 aa5.95□□□□□ -1.46
CSDE1-202ENST00000339438 SERPINB7O75635 380 aa5.95□□□□□ -1.46
CSDE1-202ENST00000339438 ASMTLO95671 621 aa5.95□□□□□ -1.46
CSDE1-202ENST00000339438 EFEMP2O95967 443 aa5.95□□□□□ -1.46
CSDE1-202ENST00000339438 ZFYP08048 801 aaPredicted RBP5.95□□□□□ -1.46
CSDE1-202ENST00000339438 SMARCA1P28370 1054 aa5.95□□□□□ -1.46
CSDE1-202ENST00000339438 TCP10Q12799 353 aa5.95□□□□□ -1.46
CSDE1-202ENST00000339438 RCN1Q15293 331 aa5.95□□□□□ -1.46
CSDE1-202ENST00000339438 ENOX2Q16206 610 aaKnown RBP5.95□□□□□ -1.46
CSDE1-202ENST00000339438 RNF111Q6ZNA4 994 aa5.95□□□□□ -1.46
CSDE1-202ENST00000339438 ZC3H18Q86VM9 953 aaKnown RBP5.95□□□□□ -1.46
CSDE1-202ENST00000339438 DNAAF5Q86Y56 855 aa5.95□□□□□ -1.46
CSDE1-202ENST00000339438 FAM114A1Q8IWE2 563 aa5.95□□□□□ -1.46
CSDE1-202ENST00000339438 LRRC8CQ8TDW0 803 aa5.95□□□□□ -1.46
CSDE1-202ENST00000339438 ERP27Q96DN0 273 aa5.95□□□□□ -1.46
CSDE1-202ENST00000339438 MAGEB18Q96M61 343 aa5.95□□□□□ -1.46
CSDE1-202ENST00000339438 STOML1Q9UBI4 398 aa5.95□□□□□ -1.46
CSDE1-202ENST00000339438 INTUQ9ULD6 942 aa5.95□□□□□ -1.46
CSDE1-202ENST00000339438 STARD13Q9Y3M8 1113 aa5.95□□□□□ -1.46
CSDE1-202ENST00000339438 MYH11P35749 1972 aa5.94□□□□□ -1.46
CSDE1-202ENST00000339438 VPS13AQ96RL7 3174 aa5.94□□□□□ -1.46
CSDE1-202ENST00000339438 HTR3EA5X5Y0 456 aa5.94□□□□□ -1.46
CSDE1-202ENST00000339438 PP2D1A8MPX8 630 aa5.94□□□□□ -1.46
CSDE1-202ENST00000339438 BOLA2-SMG1P6H3BVE0 249 aa5.94□□□□□ -1.46
CSDE1-202ENST00000339438 RGS20O76081 388 aa5.94□□□□□ -1.46
CSDE1-202ENST00000339438 PSMG1O95456 288 aa5.94□□□□□ -1.46
CSDE1-202ENST00000339438 LMNAP02545 664 aaKnown RBP5.94□□□□□ -1.46
CSDE1-202ENST00000339438 SERPING1P05155 500 aa5.94□□□□□ -1.46
CSDE1-202ENST00000339438 SKIP12755 728 aa5.94□□□□□ -1.46
CSDE1-202ENST00000339438 PORP16435 677 aaPredicted RBP5.94□□□□□ -1.46
CSDE1-202ENST00000339438 RCAN1P53805 252 aa5.94□□□□□ -1.46
CSDE1-202ENST00000339438 WDR4P57081 412 aaKnown RBP5.94□□□□□ -1.46
CSDE1-202ENST00000339438 GEMIN4P57678 1058 aaKnown RBP5.94□□□□□ -1.46
CSDE1-202ENST00000339438 TMEM67Q5HYA8 995 aa5.94□□□□□ -1.46
CSDE1-202ENST00000339438 UNC13DQ70J99 1090 aa5.94□□□□□ -1.46
CSDE1-202ENST00000339438 IRF2BP2Q7Z5L9 587 aa5.94□□□□□ -1.46
CSDE1-202ENST00000339438 IFNL3Q8IZI9 196 aa5.94□□□□□ -1.46
CSDE1-202ENST00000339438 METTL25Q8N6Q8 603 aa5.94□□□□□ -1.46
CSDE1-202ENST00000339438 ARL10Q8N8L6 244 aa5.94□□□□□ -1.46
CSDE1-202ENST00000339438 TPCN2Q8NHX9 752 aa5.94□□□□□ -1.46
CSDE1-202ENST00000339438 TGFBRAP1Q8WUH2 860 aa5.94□□□□□ -1.46
CSDE1-202ENST00000339438 RNF26Q9BY78 433 aaPredicted RBP5.94□□□□□ -1.46
CSDE1-202ENST00000339438 UNC45AQ9H3U1 944 aa5.94□□□□□ -1.46
CSDE1-202ENST00000339438 METTL14Q9HCE5 456 aaKnown RBP5.94□□□□□ -1.46
CSDE1-202ENST00000339438 ARHGEF4Q9NR80 690 aa5.94□□□□□ -1.46
CSDE1-202ENST00000339438 ZDHHC7Q9NXF8 308 aa5.94□□□□□ -1.46
CSDE1-202ENST00000339438 MCM9Q9NXL9 1143 aa5.94□□□□□ -1.46
CSDE1-202ENST00000339438 TMOD4Q9NZQ9 345 aa5.94□□□□□ -1.46
CSDE1-202ENST00000339438 ZBTB21Q9ULJ3 1066 aa5.94□□□□□ -1.46
CSDE1-202ENST00000339438 FRYLO94915 3013 aa5.94□□□□□ -1.46
CSDE1-202ENST00000339438 TRIM43BA6NCK2 446 aa5.94□□□□□ -1.46
CSDE1-202ENST00000339438 FAM196BA6NMK8 535 aa5.94□□□□□ -1.46
CSDE1-202ENST00000339438 SPDYE16A6NNV3 312 aaPredicted RBP5.94□□□□□ -1.46
CSDE1-202ENST00000339438 USP17L12C9JPN9 530 aa5.94□□□□□ -1.46
CSDE1-202ENST00000339438 USP17L21D6R901 530 aa5.94□□□□□ -1.46
CSDE1-202ENST00000339438 CAPN15O75808 1086 aa5.94□□□□□ -1.46
CSDE1-202ENST00000339438 PTPN4P29074 926 aa5.94□□□□□ -1.46
CSDE1-202ENST00000339438 PCSK6P29122 969 aa5.94□□□□□ -1.46
CSDE1-202ENST00000339438 MKRN3Q13064 507 aaKnown RBP5.94□□□□□ -1.46
CSDE1-202ENST00000339438 FAM47AQ5JRC9 791 aa5.94□□□□□ -1.46
CSDE1-202ENST00000339438 TTC38Q5R3I4 469 aa5.94□□□□□ -1.46
CSDE1-202ENST00000339438 MFSD4BQ5TF39 518 aa5.94□□□□□ -1.46
CSDE1-202ENST00000339438 RGS9BPQ6ZS82 235 aa5.94□□□□□ -1.46
CSDE1-202ENST00000339438 SATL1Q86VE3 508 aa5.94□□□□□ -1.46
CSDE1-202ENST00000339438 DENND1AQ8TEH3 1009 aa5.94□□□□□ -1.46
CSDE1-202ENST00000339438 PRICKLE1Q96MT3 831 aaPredicted RBP5.94□□□□□ -1.46
CSDE1-202ENST00000339438 GBP5Q96PP8 586 aa5.94□□□□□ -1.46
CSDE1-202ENST00000339438 FAIMQ9NVQ4 179 aa5.94□□□□□ -1.46
CSDE1-202ENST00000339438 ARHGEF38Q9NXL2 777 aa5.94□□□□□ -1.46
CSDE1-202ENST00000339438 PTTG2Q9NZH5 202 aa5.94□□□□□ -1.46
CSDE1-202ENST00000339438 SUCLA2Q9P2R7 463 aaPredicted RBP5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms