RNA–Protein interactions for RNA: ENST00000338469.3

TREM2-201, Transcript of triggering receptor expressed on myeloid cells 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TREM2, Length 860 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREM2-201ENST00000338469 PSMD5Q16401 504 aa12.64□□□□□ -0.39
TREM2-201ENST00000338469 UPP1Q16831 310 aa12.64□□□□□ -0.39
TREM2-201ENST00000338469 DCAF4L1Q3SXM0 396 aa12.64□□□□□ -0.39
TREM2-201ENST00000338469 KMT5BQ4FZB7 885 aa12.64□□□□□ -0.39
TREM2-201ENST00000338469 OTOP3Q7RTS5 596 aa12.64□□□□□ -0.39
TREM2-201ENST00000338469 MYCT1Q8N699 235 aa12.64□□□□□ -0.39
TREM2-201ENST00000338469 HDAC7Q8WUI4 952 aa12.64□□□□□ -0.39
TREM2-201ENST00000338469 C18orf25Q96B23 403 aaPredicted RBP12.64□□□□□ -0.39
TREM2-201ENST00000338469 GSDMAQ96QA5 445 aa12.64□□□□□ -0.39
TREM2-201ENST00000338469 NTPCRQ9BSD7 190 aaKnown RBP12.64□□□□□ -0.39
TREM2-201ENST00000338469 PLEKHA4Q9H4M7 779 aa12.64□□□□□ -0.39
TREM2-201ENST00000338469 TMEM134Q9H6X4 195 aa12.64□□□□□ -0.39
TREM2-201ENST00000338469 C17orf75Q9HAS0 396 aa12.64□□□□□ -0.39
TREM2-201ENST00000338469 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.64□□□□□ -0.39
TREM2-201ENST00000338469 RMND1Q9NWS8 449 aa12.64□□□□□ -0.39
TREM2-201ENST00000338469 KIAA1468Q9P260 1216 aa12.64□□□□□ -0.39
TREM2-201ENST00000338469 SEL1LQ9UBV2 794 aa12.64□□□□□ -0.39
TREM2-201ENST00000338469 FBXW11Q9UKB1 542 aa12.64□□□□□ -0.39
TREM2-201ENST00000338469 PCDHA5Q9Y5H7 936 aa12.64□□□□□ -0.39
TREM2-201ENST00000338469 ZFHX2Q9C0A1 2572 aaPredicted RBP12.64□□□□□ -0.39
TREM2-201ENST00000338469 COL4A3Q01955 1670 aa12.64□□□□□ -0.39
TREM2-201ENST00000338469 SF3B1O75533 1304 aaKnown RBP eCLIP12.63□□□□□ -0.39
TREM2-201ENST00000338469 FRMD3A2A2Y4 597 aa12.63□□□□□ -0.39
TREM2-201ENST00000338469 KRBA1A5PL33 1030 aa12.63□□□□□ -0.39
TREM2-201ENST00000338469 H0Y858 1186 aa12.63□□□□□ -0.39
TREM2-201ENST00000338469 KLRC4O43908 158 aa12.63□□□□□ -0.39
TREM2-201ENST00000338469 TKTP29401 623 aaKnown RBP12.63□□□□□ -0.39
TREM2-201ENST00000338469 GBP2P32456 591 aaPredicted RBP12.63□□□□□ -0.39
TREM2-201ENST00000338469 GRM5P41594 1212 aa12.63□□□□□ -0.39
TREM2-201ENST00000338469 SMTNP53814 917 aa12.63□□□□□ -0.39
TREM2-201ENST00000338469 KCNB1Q14721 858 aa12.63□□□□□ -0.39
TREM2-201ENST00000338469 GRASPQ7Z6J2 395 aaPredicted RBP12.63□□□□□ -0.39
TREM2-201ENST00000338469 SFR1Q86XK3 245 aa12.63□□□□□ -0.39
TREM2-201ENST00000338469 SLC44A3Q8N4M1 653 aa12.63□□□□□ -0.39
TREM2-201ENST00000338469 TMEM161BQ8NDZ6 487 aa12.63□□□□□ -0.39
TREM2-201ENST00000338469 SPATA20Q8TB22 786 aa12.63□□□□□ -0.39
TREM2-201ENST00000338469 ACSF2Q96CM8 615 aaPredicted RBP12.63□□□□□ -0.39
TREM2-201ENST00000338469 DDX27Q96GQ7 796 aaKnown RBP12.63□□□□□ -0.39
TREM2-201ENST00000338469 ADPGKQ9BRR6 497 aa12.63□□□□□ -0.39
TREM2-201ENST00000338469 KMT5AQ9NQR1 393 aa12.63□□□□□ -0.39
TREM2-201ENST00000338469 HCFC1R1Q9NWW0 138 aa12.63□□□□□ -0.39
TREM2-201ENST00000338469 EPS15L1Q9UBC2 864 aa12.63□□□□□ -0.39
TREM2-201ENST00000338469 KCNG1Q9UIX4 513 aa12.63□□□□□ -0.39
TREM2-201ENST00000338469 DUSP12Q9UNI6 340 aa12.63□□□□□ -0.39
TREM2-201ENST00000338469 PHLPP2Q6ZVD8 1323 aa12.62□□□□□ -0.39
TREM2-201ENST00000338469 TMEM189-UBE2V1I3L0A0 370 aa12.62□□□□□ -0.39
TREM2-201ENST00000338469 CCL16O15467 120 aa12.62□□□□□ -0.39
TREM2-201ENST00000338469 B3GAT3O94766 335 aa12.62□□□□□ -0.39
TREM2-201ENST00000338469 RHOBTB3O94955 611 aa12.62□□□□□ -0.39
TREM2-201ENST00000338469 LETM1O95202 739 aaPredicted RBP12.62□□□□□ -0.39
TREM2-201ENST00000338469 C1RP00736 705 aa12.62□□□□□ -0.39
TREM2-201ENST00000338469 MAPTP10636 758 aaKnown RBP12.62□□□□□ -0.39
TREM2-201ENST00000338469 LAMP2P13473 410 aa12.62□□□□□ -0.39
TREM2-201ENST00000338469 OR1D2P34982 312 aa12.62□□□□□ -0.39
TREM2-201ENST00000338469 PTPN5P54829 565 aa12.62□□□□□ -0.39
TREM2-201ENST00000338469 PSMD2Q13200 908 aa12.62□□□□□ -0.39
TREM2-201ENST00000338469 SLC10A6Q3KNW5 377 aa12.62□□□□□ -0.39
TREM2-201ENST00000338469 ZNF568Q3ZCX4 644 aa12.62□□□□□ -0.39
TREM2-201ENST00000338469 ZBTB41Q5SVQ8 909 aa12.62□□□□□ -0.39
TREM2-201ENST00000338469 DCLRE1AQ6PJP8 1040 aa12.62□□□□□ -0.39
TREM2-201ENST00000338469 ITFG1Q8TB96 612 aa12.62□□□□□ -0.39
TREM2-201ENST00000338469 MRPL44Q9H9J2 332 aaKnown RBP12.62□□□□□ -0.39
TREM2-201ENST00000338469 OLFML3Q9NRN5 406 aa12.62□□□□□ -0.39
TREM2-201ENST00000338469 ZDHHC7Q9NXF8 308 aa12.62□□□□□ -0.39
TREM2-201ENST00000338469 TBC1D7Q9P0N9 293 aa12.62□□□□□ -0.39
TREM2-201ENST00000338469 MTRRQ9UBK8 725 aa12.62□□□□□ -0.39
TREM2-201ENST00000338469 ANHXE9PGG2 379 aa12.61□□□□□ -0.39
TREM2-201ENST00000338469 H0YCG3 227 aa12.61□□□□□ -0.39
TREM2-201ENST00000338469 K7ENM7 598 aa12.61□□□□□ -0.39
TREM2-201ENST00000338469 GALR2O43603 387 aaPredicted RBP12.61□□□□□ -0.39
TREM2-201ENST00000338469 TBC1D4O60343 1298 aa12.61□□□□□ -0.39
TREM2-201ENST00000338469 C8AP07357 584 aa12.61□□□□□ -0.39
TREM2-201ENST00000338469 CFHP08603 1231 aa12.61□□□□□ -0.39
TREM2-201ENST00000338469 HARSP12081 509 aaKnown RBP12.61□□□□□ -0.39
TREM2-201ENST00000338469 NCKAP1LP55160 1127 aa12.61□□□□□ -0.39
TREM2-201ENST00000338469 SPAG1Q07617 926 aa12.61□□□□□ -0.39
TREM2-201ENST00000338469 EHHADHQ08426 723 aa12.61□□□□□ -0.39
TREM2-201ENST00000338469 HTR4Q13639 388 aa12.61□□□□□ -0.39
TREM2-201ENST00000338469 RAB33AQ14088 237 aa12.61□□□□□ -0.39
TREM2-201ENST00000338469 FAM26FQ5R3K3 315 aa12.61□□□□□ -0.39
TREM2-201ENST00000338469 ASTLQ6HA08 431 aaPredicted RBP12.61□□□□□ -0.39
TREM2-201ENST00000338469 PARM1Q6UWI2 310 aa12.61□□□□□ -0.39
TREM2-201ENST00000338469 CYP26C1Q6V0L0 522 aa12.61□□□□□ -0.39
TREM2-201ENST00000338469 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.61□□□□□ -0.39
TREM2-201ENST00000338469 RBM43Q6ZSC3 357 aaKnown RBP12.61□□□□□ -0.39
TREM2-201ENST00000338469 GET4Q7L5D6 327 aaPredicted RBP12.61□□□□□ -0.39
TREM2-201ENST00000338469 FLCNQ8NFG4 579 aa12.61□□□□□ -0.39
TREM2-201ENST00000338469 SPIRE2Q8WWL2 714 aa12.61□□□□□ -0.39
TREM2-201ENST00000338469 MRPL4Q9BYD3 311 aaKnown RBP12.61□□□□□ -0.39
TREM2-201ENST00000338469 GTPBP4Q9BZE4 634 aaKnown RBP12.61□□□□□ -0.39
TREM2-201ENST00000338469 PIDD1Q9HB75 910 aa12.61□□□□□ -0.39
TREM2-201ENST00000338469 MAN1B1Q9UKM7 699 aa12.61□□□□□ -0.39
TREM2-201ENST00000338469 CDY1Q9Y6F8 540 aa12.61□□□□□ -0.39
TREM2-201ENST00000338469 CFAP54Q96N23 3096 aa12.6□□□□□ -0.39
TREM2-201ENST00000338469 BIN1O00499 593 aa12.6□□□□□ -0.39
TREM2-201ENST00000338469 GCNT3O95395 438 aa12.6□□□□□ -0.39
TREM2-201ENST00000338469 MCF2P10911 925 aa12.6□□□□□ -0.39
TREM2-201ENST00000338469 KCNE1P15382 129 aa12.6□□□□□ -0.39
TREM2-201ENST00000338469 NMT1P30419 496 aaKnown RBP12.6□□□□□ -0.39
TREM2-201ENST00000338469 TNFSF9P41273 254 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms