RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 MAATS1Q7Z4T9 603 aa13.44□□□□□ -0.26
LIMK1-201ENST00000336180 CCDC50Q8IVM0 306 aa13.44□□□□□ -0.26
LIMK1-201ENST00000336180 HAUS1Q96CS2 278 aa13.44□□□□□ -0.26
LIMK1-201ENST00000336180 ZIM3Q96PE6 472 aa13.44□□□□□ -0.26
LIMK1-201ENST00000336180 LAMA3Q16787 3333 aa13.43□□□□□ -0.26
LIMK1-201ENST00000336180 DOCK3Q8IZD9 2030 aa13.43□□□□□ -0.26
LIMK1-201ENST00000336180 MEFVO15553 781 aaPredicted RBP13.43□□□□□ -0.26
LIMK1-201ENST00000336180 C22orf31O95567 290 aa13.43□□□□□ -0.26
LIMK1-201ENST00000336180 HUNKP57058 714 aa13.43□□□□□ -0.26
LIMK1-201ENST00000336180 DHX9Q08211 1270 aaKnown RBP13.43□□□□□ -0.26
LIMK1-201ENST00000336180 AMHR2Q16671 573 aa13.43□□□□□ -0.26
LIMK1-201ENST00000336180 KAZNQ674X7 775 aa13.43□□□□□ -0.26
LIMK1-201ENST00000336180 SLFN12LQ6IEE8 588 aa13.43□□□□□ -0.26
LIMK1-201ENST00000336180 AFAP1L1Q8TED9 768 aa13.43□□□□□ -0.26
LIMK1-201ENST00000336180 ZC3H15Q8WU90 426 aaKnown RBP13.43□□□□□ -0.26
LIMK1-201ENST00000336180 TFAP2BQ92481 460 aa13.43□□□□□ -0.26
LIMK1-201ENST00000336180 MPHOSPH6Q99547 160 aaKnown RBP13.43□□□□□ -0.26
LIMK1-201ENST00000336180 LPIN3Q9BQK8 851 aa13.43□□□□□ -0.26
LIMK1-201ENST00000336180 ERAP1Q9NZ08 941 aa13.43□□□□□ -0.26
LIMK1-201ENST00000336180 ADAM22Q9P0K1 906 aa13.43□□□□□ -0.26
LIMK1-201ENST00000336180 A0A0A6YYK5 440 aaPredicted RBP13.43□□□□□ -0.26
LIMK1-201ENST00000336180 IQCA1LA6NCM1 817 aa13.43□□□□□ -0.26
LIMK1-201ENST00000336180 H3BRB1 525 aa13.43□□□□□ -0.26
LIMK1-201ENST00000336180 MAPK13O15264 365 aa13.43□□□□□ -0.26
LIMK1-201ENST00000336180 ITGB3P05106 788 aa13.43□□□□□ -0.26
LIMK1-201ENST00000336180 GTF2A1P52655 376 aaPredicted RBP13.43□□□□□ -0.26
LIMK1-201ENST00000336180 SF3A3Q12874 501 aaKnown RBP eCLIP13.43□□□□□ -0.26
LIMK1-201ENST00000336180 TTC27Q6P3X3 843 aa13.43□□□□□ -0.26
LIMK1-201ENST00000336180 OR6J1Q8NGC5 347 aa13.43□□□□□ -0.26
LIMK1-201ENST00000336180 MAGOHBQ96A72 148 aaKnown RBP13.43□□□□□ -0.26
LIMK1-201ENST00000336180 CCDC113Q9H0I3 377 aa13.43□□□□□ -0.26
LIMK1-201ENST00000336180 TUT1Q9H6E5 874 aaKnown RBP13.43□□□□□ -0.26
LIMK1-201ENST00000336180 IFT122Q9HBG6 1241 aa13.43□□□□□ -0.26
LIMK1-201ENST00000336180 LACTBL1A8MY62 500 aa13.43□□□□□ -0.26
LIMK1-201ENST00000336180 HCRTO43612 131 aa13.43□□□□□ -0.26
LIMK1-201ENST00000336180 FAM189A1O60320 539 aa13.43□□□□□ -0.26
LIMK1-201ENST00000336180 MBTD1Q05BQ5 628 aa13.43□□□□□ -0.26
LIMK1-201ENST00000336180 ZNF699Q32M78 642 aa13.43□□□□□ -0.26
LIMK1-201ENST00000336180 ZNF792Q3KQV3 632 aa13.43□□□□□ -0.26
LIMK1-201ENST00000336180 B4GALNT4Q76KP1 1039 aa13.43□□□□□ -0.26
LIMK1-201ENST00000336180 BRSK2Q8IWQ3 736 aa13.43□□□□□ -0.26
LIMK1-201ENST00000336180 RHOT2Q8IXI1 618 aa13.43□□□□□ -0.26
LIMK1-201ENST00000336180 MCOLN2Q8IZK6 566 aa13.43□□□□□ -0.26
LIMK1-201ENST00000336180 ACTRT1Q8TDG2 376 aa13.43□□□□□ -0.26
LIMK1-201ENST00000336180 RNF25Q96BH1 459 aaPredicted RBP13.43□□□□□ -0.26
LIMK1-201ENST00000336180 MYCBPQ99417 103 aaPredicted RBP13.43□□□□□ -0.26
LIMK1-201ENST00000336180 IMPG2Q9BZV3 1241 aa13.43□□□□□ -0.26
LIMK1-201ENST00000336180 SMYD3Q9H7B4 428 aa13.43□□□□□ -0.26
LIMK1-201ENST00000336180 CISHQ9NSE2 258 aa13.43□□□□□ -0.26
LIMK1-201ENST00000336180 FLRT1Q9NZU1 646 aa13.43□□□□□ -0.26
LIMK1-201ENST00000336180 INTUQ9ULD6 942 aa13.43□□□□□ -0.26
LIMK1-201ENST00000336180 MROH7Q68CQ1 1323 aa13.43□□□□□ -0.26
LIMK1-201ENST00000336180 H0YCG3 227 aa13.42□□□□□ -0.26
LIMK1-201ENST00000336180 TULP2O00295 520 aa13.42□□□□□ -0.26
LIMK1-201ENST00000336180 OGTO15294 1046 aa13.42□□□□□ -0.26
LIMK1-201ENST00000336180 ITGBL1O95965 494 aaPredicted RBP13.42□□□□□ -0.26
LIMK1-201ENST00000336180 CETPP11597 493 aa13.42□□□□□ -0.26
LIMK1-201ENST00000336180 RFX1P22670 979 aa13.42□□□□□ -0.26
LIMK1-201ENST00000336180 SNRPFP62306 86 aaKnown RBP13.42□□□□□ -0.26
LIMK1-201ENST00000336180 GPS2Q13227 327 aa13.42□□□□□ -0.26
LIMK1-201ENST00000336180 JADE1Q6IE81 842 aa13.42□□□□□ -0.26
LIMK1-201ENST00000336180 ZNF572Q7Z3I7 529 aaPredicted RBP13.42□□□□□ -0.26
LIMK1-201ENST00000336180 UBLCP1Q8WVY7 318 aaPredicted RBP13.42□□□□□ -0.26
LIMK1-201ENST00000336180 CACNG4Q9UBN1 327 aa13.42□□□□□ -0.26
LIMK1-201ENST00000336180 PNMA3Q9UL41 463 aa13.42□□□□□ -0.26
LIMK1-201ENST00000336180 HOXC6P09630 235 aa13.42□□□□□ -0.26
LIMK1-201ENST00000336180 ARF4P18085 180 aaPredicted RBP13.42□□□□□ -0.26
LIMK1-201ENST00000336180 PLTPP55058 493 aa13.42□□□□□ -0.26
LIMK1-201ENST00000336180 TAS2R40P59535 323 aa13.42□□□□□ -0.26
LIMK1-201ENST00000336180 SATB1Q01826 763 aa13.42□□□□□ -0.26
LIMK1-201ENST00000336180 GCNT1Q02742 428 aa13.42□□□□□ -0.26
LIMK1-201ENST00000336180 CST9Q5W186 159 aa13.42□□□□□ -0.26
LIMK1-201ENST00000336180 ANKS1BQ7Z6G8 1248 aa13.42□□□□□ -0.26
LIMK1-201ENST00000336180 CCDC25Q86WR0 208 aa13.42□□□□□ -0.26
LIMK1-201ENST00000336180 FAM167AQ96KS9 214 aa13.42□□□□□ -0.26
LIMK1-201ENST00000336180 PWWP2AQ96N64 755 aa13.42□□□□□ -0.26
LIMK1-201ENST00000336180 TWNKQ96RR1 684 aa13.42□□□□□ -0.26
LIMK1-201ENST00000336180 GDF3Q9NR23 364 aa13.42□□□□□ -0.26
LIMK1-201ENST00000336180 TMEM59LQ9UK28 342 aa13.42□□□□□ -0.26
LIMK1-201ENST00000336180 STYXL1Q9Y6J8 313 aa13.42□□□□□ -0.26
LIMK1-201ENST00000336180 ZNFX1Q9P2E3 1918 aaKnown RBP13.42□□□□□ -0.26
LIMK1-201ENST00000336180 LOXHD1Q8IVV2 1947 aa13.41□□□□□ -0.26
LIMK1-201ENST00000336180 CCDC66A2RUB6 948 aa13.41□□□□□ -0.26
LIMK1-201ENST00000336180 ASB14A6NK59 587 aa13.41□□□□□ -0.26
LIMK1-201ENST00000336180 ABLIM1O14639 778 aa13.41□□□□□ -0.26
LIMK1-201ENST00000336180 HBP1O60381 514 aa13.41□□□□□ -0.26
LIMK1-201ENST00000336180 LGR5O75473 907 aa13.41□□□□□ -0.26
LIMK1-201ENST00000336180 GH1P01241 217 aa13.41□□□□□ -0.26
LIMK1-201ENST00000336180 STAG3L1P0CL83 205 aa13.41□□□□□ -0.26
LIMK1-201ENST00000336180 EPHB4P54760 987 aa13.41□□□□□ -0.26
LIMK1-201ENST00000336180 PPFIA1Q13136 1202 aa13.41□□□□□ -0.26
LIMK1-201ENST00000336180 MTM1Q13496 603 aa13.41□□□□□ -0.26
LIMK1-201ENST00000336180 SESTD1Q86VW0 696 aa13.41□□□□□ -0.26
LIMK1-201ENST00000336180 ZNF606Q8WXB4 792 aa13.41□□□□□ -0.26
LIMK1-201ENST00000336180 RUFY1Q96T51 708 aa13.41□□□□□ -0.26
LIMK1-201ENST00000336180 OSMRQ99650 979 aa13.41□□□□□ -0.26
LIMK1-201ENST00000336180 C10orf88Q9H8K7 445 aa13.41□□□□□ -0.26
LIMK1-201ENST00000336180 KLK14Q9P0G3 267 aa13.41□□□□□ -0.26
LIMK1-201ENST00000336180 PCDHB2Q9Y5E7 798 aa13.41□□□□□ -0.26
LIMK1-201ENST00000336180 ATP8B1O43520 1251 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms