RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 GABBR1Q9UBS5 961 aa17.54■□□□□ 0.4
CDC42EP4-201ENST00000335793 ZNF148Q9UQR1 794 aa17.54■□□□□ 0.4
CDC42EP4-201ENST00000335793 USP15Q9Y4E8 981 aaPredicted RBP17.54■□□□□ 0.4
CDC42EP4-201ENST00000335793 DPPA5A6NC42 116 aa17.54■□□□□ 0.4
CDC42EP4-201ENST00000335793 SPDYE2BA6NHP3 402 aa17.54■□□□□ 0.4
CDC42EP4-201ENST00000335793 A8MUI8 341 aa17.54■□□□□ 0.4
CDC42EP4-201ENST00000335793 GH1P01241 217 aa17.54■□□□□ 0.4
CDC42EP4-201ENST00000335793 SPDYE6P0CI01 402 aa17.54■□□□□ 0.4
CDC42EP4-201ENST00000335793 ITIH2P19823 946 aa17.54■□□□□ 0.4
CDC42EP4-201ENST00000335793 ADSSP30520 456 aa17.54■□□□□ 0.4
CDC42EP4-201ENST00000335793 LIG4P49917 911 aa17.54■□□□□ 0.4
CDC42EP4-201ENST00000335793 GTF2BQ00403 316 aa17.54■□□□□ 0.4
CDC42EP4-201ENST00000335793 SPOPLQ6IQ16 392 aa17.54■□□□□ 0.4
CDC42EP4-201ENST00000335793 HAUS1Q96CS2 278 aa17.54■□□□□ 0.4
CDC42EP4-201ENST00000335793 WDR64B1ANS9 1081 aa17.53■□□□□ 0.4
CDC42EP4-201ENST00000335793 KRT15P19012 456 aa17.53■□□□□ 0.4
CDC42EP4-201ENST00000335793 ACOT2P49753 483 aa17.53■□□□□ 0.4
CDC42EP4-201ENST00000335793 TMEM62Q0P6H9 643 aa17.53■□□□□ 0.4
CDC42EP4-201ENST00000335793 PPP1R15BQ5SWA1 713 aa17.53■□□□□ 0.4
CDC42EP4-201ENST00000335793 TGS1Q96RS0 853 aaKnown RBP17.53■□□□□ 0.4
CDC42EP4-201ENST00000335793 ECT2Q9H8V3 914 aa17.53■□□□□ 0.4
CDC42EP4-201ENST00000335793 SEPT9Q9UHD8 586 aaPredicted RBP17.53■□□□□ 0.4
CDC42EP4-201ENST00000335793 PCDHB4Q9Y5E5 795 aa17.53■□□□□ 0.4
CDC42EP4-201ENST00000335793 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.53■□□□□ 0.4
CDC42EP4-201ENST00000335793 ADAMTSL1Q8N6G6 1762 aa17.53■□□□□ 0.4
CDC42EP4-201ENST00000335793 hCG_2014768A0A024R1R8 64 aa17.53■□□□□ 0.4
CDC42EP4-201ENST00000335793 SPAG7O75391 227 aa17.53■□□□□ 0.4
CDC42EP4-201ENST00000335793 GJB6O95452 261 aa17.53■□□□□ 0.4
CDC42EP4-201ENST00000335793 CYP1A2P05177 515 aa17.53■□□□□ 0.4
CDC42EP4-201ENST00000335793 CAP2P40123 477 aa17.53■□□□□ 0.4
CDC42EP4-201ENST00000335793 HADHBP55084 474 aaKnown RBP17.53■□□□□ 0.4
CDC42EP4-201ENST00000335793 MRPS9P82933 396 aaKnown RBP17.53■□□□□ 0.4
CDC42EP4-201ENST00000335793 BRDTQ58F21 947 aaPredicted RBP17.53■□□□□ 0.4
CDC42EP4-201ENST00000335793 LIN9Q5TKA1 542 aa17.53■□□□□ 0.4
CDC42EP4-201ENST00000335793 CWF19L1Q69YN2 538 aaKnown RBP17.53■□□□□ 0.4
CDC42EP4-201ENST00000335793 MAIP1Q8WWC4 291 aa17.53■□□□□ 0.4
CDC42EP4-201ENST00000335793 CNKSR1Q969H4 720 aa17.53■□□□□ 0.4
CDC42EP4-201ENST00000335793 RMI1Q9H9A7 625 aa17.53■□□□□ 0.4
CDC42EP4-201ENST00000335793 ADAM22Q9P0K1 906 aa17.53■□□□□ 0.4
CDC42EP4-201ENST00000335793 KLHL14Q9P2G3 628 aa17.53■□□□□ 0.4
CDC42EP4-201ENST00000335793 RASA4BC9J798 803 aa17.53■□□□□ 0.4
CDC42EP4-201ENST00000335793 RASA4O43374 803 aa17.53■□□□□ 0.4
CDC42EP4-201ENST00000335793 COQ9O75208 318 aa17.53■□□□□ 0.4
CDC42EP4-201ENST00000335793 ICAM1P05362 532 aa17.53■□□□□ 0.4
CDC42EP4-201ENST00000335793 ASNSP08243 561 aa17.53■□□□□ 0.4
CDC42EP4-201ENST00000335793 PIK3CAP42336 1068 aa17.53■□□□□ 0.4
CDC42EP4-201ENST00000335793 MAGEA10P43363 369 aaPredicted RBP17.53■□□□□ 0.4
CDC42EP4-201ENST00000335793 TMEM270Q6UE05 265 aa17.53■□□□□ 0.4
CDC42EP4-201ENST00000335793 ATL2Q8NHH9 583 aa17.53■□□□□ 0.4
CDC42EP4-201ENST00000335793 HELQQ8TDG4 1101 aa17.53■□□□□ 0.4
CDC42EP4-201ENST00000335793 IFT74Q96LB3 600 aa17.53■□□□□ 0.4
CDC42EP4-201ENST00000335793 ROPN1BQ9BZX4 212 aaPredicted RBP17.53■□□□□ 0.4
CDC42EP4-201ENST00000335793 SUDS3Q9H7L9 328 aaPredicted RBP17.53■□□□□ 0.4
CDC42EP4-201ENST00000335793 ROPN1Q9HAT0 212 aaPredicted RBP17.53■□□□□ 0.4
CDC42EP4-201ENST00000335793 R3HDM2Q9Y2K5 976 aaKnown RBP17.53■□□□□ 0.4
CDC42EP4-201ENST00000335793 TTC4O95801 387 aa17.52■□□□□ 0.4
CDC42EP4-201ENST00000335793 IZUMO3Q5VZ72 239 aa17.52■□□□□ 0.4
CDC42EP4-201ENST00000335793 SWSAP1Q6NVH7 229 aa17.52■□□□□ 0.4
CDC42EP4-201ENST00000335793 VPS37BQ9H9H4 285 aa17.52■□□□□ 0.4
CDC42EP4-201ENST00000335793 ANKFY1Q9P2R3 1169 aa17.52■□□□□ 0.4
CDC42EP4-201ENST00000335793 ASTN2O75129 1339 aaPredicted RBP17.52■□□□□ 0.4
CDC42EP4-201ENST00000335793 YDJCA8MPS7 323 aa17.52■□□□□ 0.4
CDC42EP4-201ENST00000335793 MGRN1O60291 552 aa17.52■□□□□ 0.4
CDC42EP4-201ENST00000335793 SNX3O60493 162 aa17.52■□□□□ 0.4
CDC42EP4-201ENST00000335793 SPP2Q13103 211 aa17.52■□□□□ 0.4
CDC42EP4-201ENST00000335793 ITIH4Q14624 930 aa17.52■□□□□ 0.4
CDC42EP4-201ENST00000335793 TAF11Q15544 211 aa17.52■□□□□ 0.4
CDC42EP4-201ENST00000335793 LACTB2Q53H82 288 aaPredicted RBP17.52■□□□□ 0.4
CDC42EP4-201ENST00000335793 ARHGAP22Q7Z5H3 698 aa17.52■□□□□ 0.4
CDC42EP4-201ENST00000335793 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.52■□□□□ 0.4
CDC42EP4-201ENST00000335793 SYTL5Q8TDW5 730 aaPredicted RBP17.52■□□□□ 0.4
CDC42EP4-201ENST00000335793 LRRC19Q9H756 370 aa17.52■□□□□ 0.4
CDC42EP4-201ENST00000335793 NOP53Q9NZM5 478 aaKnown RBP17.52■□□□□ 0.4
CDC42EP4-201ENST00000335793 DHX15O43143 795 aaKnown RBP17.52■□□□□ 0.39
CDC42EP4-201ENST00000335793 NPM3O75607 178 aaKnown RBP17.52■□□□□ 0.39
CDC42EP4-201ENST00000335793 ABCD1P33897 745 aa17.52■□□□□ 0.39
CDC42EP4-201ENST00000335793 XRCC4Q13426 336 aa17.52■□□□□ 0.39
CDC42EP4-201ENST00000335793 MTERF2Q49AM1 385 aa17.52■□□□□ 0.39
CDC42EP4-201ENST00000335793 DNAJC14Q6Y2X3 702 aaPredicted RBP17.52■□□□□ 0.39
CDC42EP4-201ENST00000335793 TEKT4Q8WW24 435 aa17.52■□□□□ 0.39
CDC42EP4-201ENST00000335793 CCDC97Q96F63 343 aaPredicted RBP17.52■□□□□ 0.39
CDC42EP4-201ENST00000335793 TRAIPQ9BWF2 469 aa17.52■□□□□ 0.39
CDC42EP4-201ENST00000335793 STRA6Q9BX79 667 aa17.52■□□□□ 0.39
CDC42EP4-201ENST00000335793 O00370 1275 aa17.51■□□□□ 0.39
CDC42EP4-201ENST00000335793 ONECUT3O60422 494 aaPredicted RBP17.51■□□□□ 0.39
CDC42EP4-201ENST00000335793 GHRP10912 638 aa17.51■□□□□ 0.39
CDC42EP4-201ENST00000335793 MTM1Q13496 603 aa17.51■□□□□ 0.39
CDC42EP4-201ENST00000335793 SEPT7Q16181 437 aaKnown RBP17.51■□□□□ 0.39
CDC42EP4-201ENST00000335793 CLEC16AQ2KHT3 1053 aa17.51■□□□□ 0.39
CDC42EP4-201ENST00000335793 ZNF394Q53GI3 561 aa17.51■□□□□ 0.39
CDC42EP4-201ENST00000335793 PIGWQ7Z7B1 504 aa17.51■□□□□ 0.39
CDC42EP4-201ENST00000335793 LONP2Q86WA8 852 aa17.51■□□□□ 0.39
CDC42EP4-201ENST00000335793 ERICH1Q86X53 443 aa17.51■□□□□ 0.39
CDC42EP4-201ENST00000335793 TMEM161BQ8NDZ6 487 aa17.51■□□□□ 0.39
CDC42EP4-201ENST00000335793 CD101Q93033 1021 aa17.51■□□□□ 0.39
CDC42EP4-201ENST00000335793 SERPINB12Q96P63 405 aa17.51■□□□□ 0.39
CDC42EP4-201ENST00000335793 TCHPQ9BT92 498 aa17.51■□□□□ 0.39
CDC42EP4-201ENST00000335793 SAYSD1Q9NPB0 183 aa17.51■□□□□ 0.39
CDC42EP4-201ENST00000335793 ZNF277Q9NRM2 450 aaPredicted RBP17.51■□□□□ 0.39
CDC42EP4-201ENST00000335793 WHRNQ9P202 907 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms