RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 MED1Q15648 1581 aaPredicted RBP15.84■□□□□ 0.13
C9orf47-201ENST00000334490 GRID2IPA4D2P6 1211 aa15.84■□□□□ 0.13
C9orf47-201ENST00000334490 GUCY2CP25092 1073 aa15.84■□□□□ 0.13
C9orf47-201ENST00000334490 ADCYAP1R1P41586 468 aa15.84■□□□□ 0.13
C9orf47-201ENST00000334490 MAPRE1Q15691 268 aaKnown RBP15.84■□□□□ 0.13
C9orf47-201ENST00000334490 TMTC4Q5T4D3 741 aa15.84■□□□□ 0.13
C9orf47-201ENST00000334490 DEFB128Q7Z7B8 93 aa15.84■□□□□ 0.13
C9orf47-201ENST00000334490 PPM1NQ8N819 430 aa15.84■□□□□ 0.13
C9orf47-201ENST00000334490 SLC7A14Q8TBB6 771 aa15.84■□□□□ 0.13
C9orf47-201ENST00000334490 DNAJB3Q8WWF6 145 aa15.84■□□□□ 0.13
C9orf47-201ENST00000334490 VCXQ9H320 206 aa15.84■□□□□ 0.13
C9orf47-201ENST00000334490 RCN2Q14257 317 aa15.83■□□□□ 0.13
C9orf47-201ENST00000334490 ZSCAN26Q16670 478 aa15.83■□□□□ 0.13
C9orf47-201ENST00000334490 SHCBP1Q8NEM2 672 aa15.83■□□□□ 0.13
C9orf47-201ENST00000334490 SCG3Q8WXD2 468 aaKnown RBP15.83■□□□□ 0.13
C9orf47-201ENST00000334490 PDLIM2Q96JY6 352 aa15.83■□□□□ 0.13
C9orf47-201ENST00000334490 ERGIC2Q96RQ1 377 aa15.83■□□□□ 0.13
C9orf47-201ENST00000334490 HMX1Q9NP08 348 aaPredicted RBP15.83■□□□□ 0.13
C9orf47-201ENST00000334490 ZC3H11AO75152 810 aaKnown RBP eCLIP15.83■□□□□ 0.12
C9orf47-201ENST00000334490 CCT5P48643 541 aa15.83■□□□□ 0.12
C9orf47-201ENST00000334490 CHADLQ6NUI6 762 aa15.83■□□□□ 0.12
C9orf47-201ENST00000334490 OTOP1Q7RTM1 612 aa15.83■□□□□ 0.12
C9orf47-201ENST00000334490 DPF3Q92784 378 aa15.83■□□□□ 0.12
C9orf47-201ENST00000334490 RANBP17Q9H2T7 1088 aaKnown RBP15.83■□□□□ 0.12
C9orf47-201ENST00000334490 SARS2Q9NP81 518 aaKnown RBP15.83■□□□□ 0.12
C9orf47-201ENST00000334490 DBR1Q9UK59 544 aaKnown RBP15.83■□□□□ 0.12
C9orf47-201ENST00000334490 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.83■□□□□ 0.12
C9orf47-201ENST00000334490 HOXA2O43364 376 aa15.83■□□□□ 0.12
C9orf47-201ENST00000334490 PQBP1O60828 265 aaKnown RBP15.83■□□□□ 0.12
C9orf47-201ENST00000334490 PCK1P35558 622 aa15.83■□□□□ 0.12
C9orf47-201ENST00000334490 DEFB115Q30KQ5 88 aa15.83■□□□□ 0.12
C9orf47-201ENST00000334490 KDELC2Q7Z4H8 507 aa15.83■□□□□ 0.12
C9orf47-201ENST00000334490 RCOR2Q8IZ40 523 aa15.83■□□□□ 0.12
C9orf47-201ENST00000334490 TRAPPC12Q8WVT3 735 aa15.83■□□□□ 0.12
C9orf47-201ENST00000334490 L3MBTL3Q96JM7 780 aaPredicted RBP15.83■□□□□ 0.12
C9orf47-201ENST00000334490 RNF208Q9H0X6 261 aa15.83■□□□□ 0.12
C9orf47-201ENST00000334490 VCX3BQ9H321 246 aa15.83■□□□□ 0.12
C9orf47-201ENST00000334490 BAIAP2L1Q9UHR4 511 aa15.83■□□□□ 0.12
C9orf47-201ENST00000334490 GYPCP04921 128 aa15.83■□□□□ 0.12
C9orf47-201ENST00000334490 PDIA2Q13087 525 aaKnown RBP15.83■□□□□ 0.12
C9orf47-201ENST00000334490 SMAD1Q15797 465 aaKnown RBP15.83■□□□□ 0.12
C9orf47-201ENST00000334490 EFHC1Q5JVL4 640 aa15.83■□□□□ 0.12
C9orf47-201ENST00000334490 TRIM67Q6ZTA4 783 aa15.83■□□□□ 0.12
C9orf47-201ENST00000334490 NIPA1Q7RTP0 329 aa15.83■□□□□ 0.12
C9orf47-201ENST00000334490 ZC3H15Q8WU90 426 aaKnown RBP15.83■□□□□ 0.12
C9orf47-201ENST00000334490 PLAAQ9Y263 795 aa15.83■□□□□ 0.12
C9orf47-201ENST00000334490 THP07101 528 aa15.82■□□□□ 0.12
C9orf47-201ENST00000334490 IRF1P10914 325 aa15.82■□□□□ 0.12
C9orf47-201ENST00000334490 ARSEP51690 589 aa15.82■□□□□ 0.12
C9orf47-201ENST00000334490 RIOX2Q8IUF8 465 aa15.82■□□□□ 0.12
C9orf47-201ENST00000334490 CEP120Q8N960 986 aa15.82■□□□□ 0.12
C9orf47-201ENST00000334490 YME1L1Q96TA2 773 aa15.82■□□□□ 0.12
C9orf47-201ENST00000334490 VPS11Q9H270 941 aa15.82■□□□□ 0.12
C9orf47-201ENST00000334490 BAG5Q9UL15 447 aa15.82■□□□□ 0.12
C9orf47-201ENST00000334490 SH3BP1Q9Y3L3 701 aa15.82■□□□□ 0.12
C9orf47-201ENST00000334490 COPEO14579 308 aa15.82■□□□□ 0.12
C9orf47-201ENST00000334490 SLITRK3O94933 977 aa15.82■□□□□ 0.12
C9orf47-201ENST00000334490 NCAM1P13591 858 aa15.82■□□□□ 0.12
C9orf47-201ENST00000334490 CD44P16070 742 aaKnown RBP15.82■□□□□ 0.12
C9orf47-201ENST00000334490 ACO1P21399 889 aaKnown RBP15.82■□□□□ 0.12
C9orf47-201ENST00000334490 SH2D4BQ5SQS7 431 aa15.82■□□□□ 0.12
C9orf47-201ENST00000334490 ZNF677Q86XU0 584 aa15.82■□□□□ 0.12
C9orf47-201ENST00000334490 PABPC5Q96DU9 382 aaKnown RBP15.82■□□□□ 0.12
C9orf47-201ENST00000334490 PPP1R12CQ9BZL4 782 aa15.82■□□□□ 0.12
C9orf47-201ENST00000334490 AMACRQ9UHK6 382 aa15.82■□□□□ 0.12
C9orf47-201ENST00000334490 G3BP2Q9UN86 482 aaKnown RBP15.82■□□□□ 0.12
C9orf47-201ENST00000334490 FAM187AA6NFU0 413 aa15.82■□□□□ 0.12
C9orf47-201ENST00000334490 ATMINO43313 823 aaPredicted RBP15.82■□□□□ 0.12
C9orf47-201ENST00000334490 TBC1D12O60347 775 aa15.82■□□□□ 0.12
C9orf47-201ENST00000334490 PNMA6AP0CW24 399 aaPredicted RBP15.82■□□□□ 0.12
C9orf47-201ENST00000334490 ST8SIA6P61647 398 aa15.82■□□□□ 0.12
C9orf47-201ENST00000334490 IZUMO3Q5VZ72 239 aa15.82■□□□□ 0.12
C9orf47-201ENST00000334490 RGMBQ6NW40 437 aa15.82■□□□□ 0.12
C9orf47-201ENST00000334490 TRIM65Q6PJ69 517 aa15.82■□□□□ 0.12
C9orf47-201ENST00000334490 TC2NQ8N9U0 490 aa15.82■□□□□ 0.12
C9orf47-201ENST00000334490 SCFD1Q8WVM8 642 aa15.82■□□□□ 0.12
C9orf47-201ENST00000334490 MMTAG2Q9BU76 263 aaKnown RBP15.82■□□□□ 0.12
C9orf47-201ENST00000334490 TRPV6Q9H1D0 765 aa15.82■□□□□ 0.12
C9orf47-201ENST00000334490 GOLGA8QA0A0J9YX86 632 aa15.82■□□□□ 0.12
C9orf47-201ENST00000334490 GOLGA8OA6NCC3 632 aa15.82■□□□□ 0.12
C9orf47-201ENST00000334490 GOLGA8NF8WBI6 632 aa15.82■□□□□ 0.12
C9orf47-201ENST00000334490 ATP9BO43861 1147 aa15.82■□□□□ 0.12
C9orf47-201ENST00000334490 NOL3O60936 208 aaKnown RBP15.82■□□□□ 0.12
C9orf47-201ENST00000334490 RAG1P15918 1043 aa15.82■□□□□ 0.12
C9orf47-201ENST00000334490 ZBED8Q8IZ13 594 aa15.82■□□□□ 0.12
C9orf47-201ENST00000334490 CCDC197Q8NCU1 140 aa15.82■□□□□ 0.12
C9orf47-201ENST00000334490 CDC26Q8NHZ8 85 aa15.82■□□□□ 0.12
C9orf47-201ENST00000334490 AGAP3Q96P47 875 aa15.82■□□□□ 0.12
C9orf47-201ENST00000334490 WDR24Q96S15 920 aa15.82■□□□□ 0.12
C9orf47-201ENST00000334490 CNOT10Q9H9A5 744 aaKnown RBP15.82■□□□□ 0.12
C9orf47-201ENST00000334490 KCNN4O15554 427 aa15.81■□□□□ 0.12
C9orf47-201ENST00000334490 MX2P20592 715 aa15.81■□□□□ 0.12
C9orf47-201ENST00000334490 CASP2P42575 452 aa15.81■□□□□ 0.12
C9orf47-201ENST00000334490 ORC1Q13415 861 aa15.81■□□□□ 0.12
C9orf47-201ENST00000334490 DRP2Q13474 957 aa15.81■□□□□ 0.12
C9orf47-201ENST00000334490 C10orf120Q5SQS8 335 aa15.81■□□□□ 0.12
C9orf47-201ENST00000334490 MAP3K21Q5TCX8 1036 aa15.81■□□□□ 0.12
C9orf47-201ENST00000334490 C1orf131Q8NDD1 294 aaKnown RBP15.81■□□□□ 0.12
C9orf47-201ENST00000334490 CFAP61Q8NHU2 1237 aa15.81■□□□□ 0.12
C9orf47-201ENST00000334490 POP1Q99575 1024 aaKnown RBP15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms