RNA–Protein interactions for RNA: ENST00000334352.8

USP16-201, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP16, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-201ENST00000334352 VARS2Q5ST30 1063 aaKnown RBP6.96□□□□□ -1.29
USP16-201ENST00000334352 IER5LQ5T953 404 aa6.96□□□□□ -1.29
USP16-201ENST00000334352 FAM171A1Q5VUB5 890 aa6.96□□□□□ -1.29
USP16-201ENST00000334352 NPAS3Q8IXF0 933 aa6.96□□□□□ -1.29
USP16-201ENST00000334352 MAML2Q8IZL2 1156 aaPredicted RBP6.96□□□□□ -1.29
USP16-201ENST00000334352 ZNF276Q8N554 614 aa6.96□□□□□ -1.29
USP16-201ENST00000334352 TMEM87AQ8NBN3 555 aa6.96□□□□□ -1.29
USP16-201ENST00000334352 RNF169Q8NCN4 708 aa6.96□□□□□ -1.29
USP16-201ENST00000334352 CXorf38Q8TB03 319 aa6.96□□□□□ -1.29
USP16-201ENST00000334352 CALML4Q96GE6 196 aa6.96□□□□□ -1.29
USP16-201ENST00000334352 MYRFLQ96LU7 910 aa6.96□□□□□ -1.29
USP16-201ENST00000334352 KIAA1586Q9HCI6 787 aa6.96□□□□□ -1.29
USP16-201ENST00000334352 EXOC7Q9UPT5 735 aa6.96□□□□□ -1.29
USP16-201ENST00000334352 TECTAO75443 2155 aa6.96□□□□□ -1.29
USP16-201ENST00000334352 TTLL13PA6NNM8 815 aa6.96□□□□□ -1.3
USP16-201ENST00000334352 MAPK13O15264 365 aa6.96□□□□□ -1.3
USP16-201ENST00000334352 VNN2O95498 520 aa6.96□□□□□ -1.3
USP16-201ENST00000334352 AKAP5P24588 427 aa6.96□□□□□ -1.3
USP16-201ENST00000334352 PPP3CCP48454 512 aa6.96□□□□□ -1.3
USP16-201ENST00000334352 PDE6CP51160 858 aa6.96□□□□□ -1.3
USP16-201ENST00000334352 CLCNKBP51801 687 aa6.96□□□□□ -1.3
USP16-201ENST00000334352 ROR1Q01973 937 aa6.96□□□□□ -1.3
USP16-201ENST00000334352 ITIH5Q86UX2 942 aa6.96□□□□□ -1.3
USP16-201ENST00000334352 ALYREFQ86V81 257 aaKnown RBP6.96□□□□□ -1.3
USP16-201ENST00000334352 MFSD6LQ8IWD5 586 aa6.96□□□□□ -1.3
USP16-201ENST00000334352 ZMAT2Q96NC0 199 aaKnown RBP6.96□□□□□ -1.3
USP16-201ENST00000334352 CHRDQ9H2X0 955 aa6.96□□□□□ -1.3
USP16-201ENST00000334352 VRTNQ9H8Y1 702 aa6.96□□□□□ -1.3
USP16-201ENST00000334352 PARVGQ9HBI0 331 aa6.96□□□□□ -1.3
USP16-201ENST00000334352 USP25Q9UHP3 1055 aa6.96□□□□□ -1.3
USP16-201ENST00000334352 INSL5Q9Y5Q6 135 aa6.96□□□□□ -1.3
USP16-201ENST00000334352 TRIP11Q15643 1979 aa6.96□□□□□ -1.3
USP16-201ENST00000334352 FAM237AA0A1B0GTK4 181 aa6.95□□□□□ -1.3
USP16-201ENST00000334352 SP9P0CG40 484 aa6.95□□□□□ -1.3
USP16-201ENST00000334352 PPP2R3AQ06190 1150 aa6.95□□□□□ -1.3
USP16-201ENST00000334352 SOX4Q06945 474 aaPredicted RBP6.95□□□□□ -1.3
USP16-201ENST00000334352 EHHADHQ08426 723 aa6.95□□□□□ -1.3
USP16-201ENST00000334352 RESTQ13127 1097 aa6.95□□□□□ -1.3
USP16-201ENST00000334352 ZNF568Q3ZCX4 644 aa6.95□□□□□ -1.3
USP16-201ENST00000334352 AUTS2Q8WXX7 1259 aa6.95□□□□□ -1.3
USP16-201ENST00000334352 OVCA2Q8WZ82 227 aa6.95□□□□□ -1.3
USP16-201ENST00000334352 SPATA17Q96L03 361 aa6.95□□□□□ -1.3
USP16-201ENST00000334352 ASB16Q96NS5 453 aa6.95□□□□□ -1.3
USP16-201ENST00000334352 HAPLN2Q9GZV7 340 aa6.95□□□□□ -1.3
USP16-201ENST00000334352 TBC1D17Q9HA65 648 aa6.95□□□□□ -1.3
USP16-201ENST00000334352 LTB4R2Q9NPC1 389 aa6.95□□□□□ -1.3
USP16-201ENST00000334352 ZSCAN32Q9NX65 697 aa6.95□□□□□ -1.3
USP16-201ENST00000334352 RAPGEFL1Q9UHV5 662 aa6.95□□□□□ -1.3
USP16-201ENST00000334352 FBXO2Q9UK22 296 aaPredicted RBP6.95□□□□□ -1.3
USP16-201ENST00000334352 FBXL5Q9UKA1 691 aa6.95□□□□□ -1.3
USP16-201ENST00000334352 PRR5-ARHGAP8B1AHC4 643 aa6.95□□□□□ -1.3
USP16-201ENST00000334352 MYL1P05976 194 aa6.95□□□□□ -1.3
USP16-201ENST00000334352 ODC1P11926 461 aa6.95□□□□□ -1.3
USP16-201ENST00000334352 CLDN10P78369 228 aa6.95□□□□□ -1.3
USP16-201ENST00000334352 ARHGAP8P85298 464 aa6.95□□□□□ -1.3
USP16-201ENST00000334352 LRRC32Q14392 662 aa6.95□□□□□ -1.3
USP16-201ENST00000334352 EPM2AIP1Q7L775 607 aaPredicted RBP6.95□□□□□ -1.3
USP16-201ENST00000334352 ZNF720Q7Z2F6 126 aa6.95□□□□□ -1.3
USP16-201ENST00000334352 KCNK18Q7Z418 384 aa6.95□□□□□ -1.3
USP16-201ENST00000334352 HAUS6Q7Z4H7 955 aa6.95□□□□□ -1.3
USP16-201ENST00000334352 WDR5BQ86VZ2 330 aa6.95□□□□□ -1.3
USP16-201ENST00000334352 TOP6BLQ8N6T0 577 aa6.95□□□□□ -1.3
USP16-201ENST00000334352 C12orf76Q8N812 135 aaPredicted RBP6.95□□□□□ -1.3
USP16-201ENST00000334352 C3orf58Q8NDZ4 430 aa6.95□□□□□ -1.3
USP16-201ENST00000334352 SPPL2BQ8TCT7 592 aa6.95□□□□□ -1.3
USP16-201ENST00000334352 PSMG2Q969U7 264 aa6.95□□□□□ -1.3
USP16-201ENST00000334352 FUBP3Q96I24 572 aaKnown RBP eCLIP6.95□□□□□ -1.3
USP16-201ENST00000334352 TNRC6BQ9UPQ9 1833 aaKnown RBP6.95□□□□□ -1.3
USP16-201ENST00000334352 MYBPHLA2RUH7 354 aa6.95□□□□□ -1.3
USP16-201ENST00000334352 E9PMD0 336 aa6.95□□□□□ -1.3
USP16-201ENST00000334352 PPFIA3O75145 1194 aa6.95□□□□□ -1.3
USP16-201ENST00000334352 TKTP29401 623 aaKnown RBP6.95□□□□□ -1.3
USP16-201ENST00000334352 TUFMP49411 452 aaKnown RBP6.95□□□□□ -1.3
USP16-201ENST00000334352 PEX3P56589 373 aa6.95□□□□□ -1.3
USP16-201ENST00000334352 ANGPT1Q15389 498 aa6.95□□□□□ -1.3
USP16-201ENST00000334352 HSF5Q4G112 596 aaPredicted RBP6.95□□□□□ -1.3
USP16-201ENST00000334352 PABPC1LQ4VXU2 614 aaKnown RBP6.95□□□□□ -1.3
USP16-201ENST00000334352 SLC44A4Q53GD3 710 aa6.95□□□□□ -1.3
USP16-201ENST00000334352 SLC39A4Q6P5W5 647 aa6.95□□□□□ -1.3
USP16-201ENST00000334352 TMC5Q6UXY8 1006 aa6.95□□□□□ -1.3
USP16-201ENST00000334352 C1orf210Q8IVY1 113 aa6.95□□□□□ -1.3
USP16-201ENST00000334352 ELMOD1Q8N336 334 aa6.95□□□□□ -1.3
USP16-201ENST00000334352 SUMF1Q8NBK3 374 aa6.95□□□□□ -1.3
USP16-201ENST00000334352 ATOH1Q92858 354 aaPredicted RBP6.95□□□□□ -1.3
USP16-201ENST00000334352 FGF13Q92913 245 aa6.95□□□□□ -1.3
USP16-201ENST00000334352 SMARCD2Q92925 531 aa6.95□□□□□ -1.3
USP16-201ENST00000334352 EXOC4Q96A65 974 aa6.95□□□□□ -1.3
USP16-201ENST00000334352 DNAJC19Q96DA6 116 aa6.95□□□□□ -1.3
USP16-201ENST00000334352 TNMDQ9H2S6 317 aa6.95□□□□□ -1.3
USP16-201ENST00000334352 TMEM206Q9H813 350 aa6.95□□□□□ -1.3
USP16-201ENST00000334352 CCDC39Q9UFE4 941 aa6.95□□□□□ -1.3
USP16-201ENST00000334352 ITGA11Q9UKX5 1188 aa6.95□□□□□ -1.3
USP16-201ENST00000334352 NUMBLQ9Y6R0 609 aa6.95□□□□□ -1.3
USP16-201ENST00000334352 TCHHQ07283 1943 aa6.95□□□□□ -1.3
USP16-201ENST00000334352 TICRRQ7Z2Z1 1910 aa6.94□□□□□ -1.3
USP16-201ENST00000334352 GABRDO14764 452 aa6.94□□□□□ -1.3
USP16-201ENST00000334352 CLDN3O15551 220 aa6.94□□□□□ -1.3
USP16-201ENST00000334352 PRKCSHP14314 528 aaPredicted RBP6.94□□□□□ -1.3
USP16-201ENST00000334352 GJB2P29033 226 aa6.94□□□□□ -1.3
USP16-201ENST00000334352 AP3M2P53677 418 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms