RNA–Protein interactions for RNA: ENST00000332395.6

DDX28-201, Transcript of DEAD-box helicase 28, humanhuman

APPRIS P1 BASIC

Gene DDX28, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX28-201ENST00000332395 OGTO15294 1046 aa18.56■□□□□ 0.56
DDX28-201ENST00000332395 DRG2P55039 364 aaKnown RBP18.56■□□□□ 0.56
DDX28-201ENST00000332395 MCL1Q07820 350 aa18.56■□□□□ 0.56
DDX28-201ENST00000332395 DHX9Q08211 1270 aaKnown RBP18.56■□□□□ 0.56
DDX28-201ENST00000332395 SIX1Q15475 284 aaPredicted RBP18.56■□□□□ 0.56
DDX28-201ENST00000332395 TMEM63BQ5T3F8 832 aa18.56■□□□□ 0.56
DDX28-201ENST00000332395 LLGL2Q6P1M3 1020 aa18.56■□□□□ 0.56
DDX28-201ENST00000332395 TRAPPC12Q8WVT3 735 aa18.56■□□□□ 0.56
DDX28-201ENST00000332395 CAPS2Q9BXY5 557 aa18.56■□□□□ 0.56
DDX28-201ENST00000332395 MTMR12Q9C0I1 747 aa18.56■□□□□ 0.56
DDX28-201ENST00000332395 C2orf40Q9H1Z8 148 aa18.56■□□□□ 0.56
DDX28-201ENST00000332395 ZDHHC18Q9NUE0 388 aa18.56■□□□□ 0.56
DDX28-201ENST00000332395 MYO1FO00160 1098 aa18.55■□□□□ 0.56
DDX28-201ENST00000332395 ABLIM1O14639 778 aa18.55■□□□□ 0.56
DDX28-201ENST00000332395 ASS1P00966 412 aaKnown RBP18.55■□□□□ 0.56
DDX28-201ENST00000332395 CST3P01034 146 aaPredicted RBP18.55■□□□□ 0.56
DDX28-201ENST00000332395 TXNP10599 105 aaKnown RBP18.55■□□□□ 0.56
DDX28-201ENST00000332395 SKOR1P84550 965 aa18.55■□□□□ 0.56
DDX28-201ENST00000332395 EFCAB13Q8IY85 973 aa18.55■□□□□ 0.56
DDX28-201ENST00000332395 ZC3H15Q8WU90 426 aaKnown RBP18.55■□□□□ 0.56
DDX28-201ENST00000332395 ATP6V1G3Q96LB4 118 aa18.55■□□□□ 0.56
DDX28-201ENST00000332395 JPH2Q9BR39 696 aaPredicted RBP18.55■□□□□ 0.56
DDX28-201ENST00000332395 C11orf70Q9BRQ4 267 aa18.55■□□□□ 0.56
DDX28-201ENST00000332395 PLVAPQ9BX97 442 aa18.55■□□□□ 0.56
DDX28-201ENST00000332395 SNX24Q9Y343 169 aa18.55■□□□□ 0.56
DDX28-201ENST00000332395 GOLGA6L10A6NI86 522 aa18.55■□□□□ 0.56
DDX28-201ENST00000332395 THAP12O43422 761 aa18.55■□□□□ 0.56
DDX28-201ENST00000332395 RARAP10276 462 aa18.55■□□□□ 0.56
DDX28-201ENST00000332395 SSTR3P32745 418 aaPredicted RBP18.55■□□□□ 0.56
DDX28-201ENST00000332395 EPHX2P34913 555 aa18.55■□□□□ 0.56
DDX28-201ENST00000332395 SLC1A1P43005 524 aa18.55■□□□□ 0.56
DDX28-201ENST00000332395 SLC26A2P50443 739 aa18.55■□□□□ 0.56
DDX28-201ENST00000332395 OR2W6PQ8NHA6 318 aa18.55■□□□□ 0.56
DDX28-201ENST00000332395 FAM212AQ96EL1 285 aa18.55■□□□□ 0.56
DDX28-201ENST00000332395 SMARCAD1Q9H4L7 1026 aa18.55■□□□□ 0.56
DDX28-201ENST00000332395 CPSF3Q9UKF6 684 aaKnown RBP18.55■□□□□ 0.56
DDX28-201ENST00000332395 HMGB1P1B2RPK0 211 aaPredicted RBP18.54■□□□□ 0.56
DDX28-201ENST00000332395 PODXLO00592 558 aa18.54■□□□□ 0.56
DDX28-201ENST00000332395 POTEJP0CG39 1038 aa18.54■□□□□ 0.56
DDX28-201ENST00000332395 COILP38432 576 aaPredicted RBP18.54■□□□□ 0.56
DDX28-201ENST00000332395 ZNF132P52740 706 aa18.54■□□□□ 0.56
DDX28-201ENST00000332395 ZNF844Q08AG5 666 aa18.54■□□□□ 0.56
DDX28-201ENST00000332395 LIN9Q5TKA1 542 aa18.54■□□□□ 0.56
DDX28-201ENST00000332395 UBR7Q8N806 425 aa18.54■□□□□ 0.56
DDX28-201ENST00000332395 UPF1Q92900 1129 aaKnown RBP eCLIP18.54■□□□□ 0.56
DDX28-201ENST00000332395 NLRP4Q96MN2 994 aa18.54■□□□□ 0.56
DDX28-201ENST00000332395 TMBIM4Q9HC24 238 aa18.54■□□□□ 0.56
DDX28-201ENST00000332395 PDGFCQ9NRA1 345 aa18.54■□□□□ 0.56
DDX28-201ENST00000332395 ADAM22Q9P0K1 906 aa18.54■□□□□ 0.56
DDX28-201ENST00000332395 PPFIA2O75334 1257 aa18.54■□□□□ 0.56
DDX28-201ENST00000332395 GJB1P08034 283 aa18.54■□□□□ 0.56
DDX28-201ENST00000332395 MYZAPP0CAP1 466 aa18.54■□□□□ 0.56
DDX28-201ENST00000332395 YBX3P16989 372 aaKnown RBP eCLIP18.54■□□□□ 0.56
DDX28-201ENST00000332395 IRAK1P51617 712 aa18.54■□□□□ 0.56
DDX28-201ENST00000332395 TTLL4Q14679 1199 aa18.54■□□□□ 0.56
DDX28-201ENST00000332395 ARMC9Q7Z3E5 817 aa18.54■□□□□ 0.56
DDX28-201ENST00000332395 PHF13Q86YI8 300 aaPredicted RBP18.54■□□□□ 0.56
DDX28-201ENST00000332395 C12orf50Q8NA57 414 aaPredicted RBP18.54■□□□□ 0.56
DDX28-201ENST00000332395 VCPIP1Q96JH7 1222 aa18.54■□□□□ 0.56
DDX28-201ENST00000332395 L3MBTL3Q96JM7 780 aaPredicted RBP18.54■□□□□ 0.56
DDX28-201ENST00000332395 ZNF668Q96K58 619 aaPredicted RBP18.54■□□□□ 0.56
DDX28-201ENST00000332395 RUNDC3BQ96NL0 473 aa18.54■□□□□ 0.56
DDX28-201ENST00000332395 TXLNGYQ9BZA5 131 aa18.54■□□□□ 0.56
DDX28-201ENST00000332395 HBP1O60381 514 aa18.53■□□□□ 0.56
DDX28-201ENST00000332395 ERLIN2O94905 339 aa18.53■□□□□ 0.56
DDX28-201ENST00000332395 PROZP22891 400 aa18.53■□□□□ 0.56
DDX28-201ENST00000332395 GJA5P36382 358 aa18.53■□□□□ 0.56
DDX28-201ENST00000332395 FNTAP49354 379 aa18.53■□□□□ 0.56
DDX28-201ENST00000332395 PLTPP55058 493 aa18.53■□□□□ 0.56
DDX28-201ENST00000332395 CORO7P57737 925 aa18.53■□□□□ 0.56
DDX28-201ENST00000332395 MYL6P60660 151 aa18.53■□□□□ 0.56
DDX28-201ENST00000332395 TFDP1Q14186 410 aa18.53■□□□□ 0.56
DDX28-201ENST00000332395 SURF1Q15526 300 aa18.53■□□□□ 0.56
DDX28-201ENST00000332395 DUOXA2Q1HG44 320 aa18.53■□□□□ 0.56
DDX28-201ENST00000332395 DPY19L2Q6NUT2 758 aa18.53■□□□□ 0.56
DDX28-201ENST00000332395 MPZL3Q6UWV2 235 aa18.53■□□□□ 0.56
DDX28-201ENST00000332395 ZDHHC24Q6UX98 284 aa18.53■□□□□ 0.56
DDX28-201ENST00000332395 KDM7AQ6ZMT4 941 aa18.53■□□□□ 0.56
DDX28-201ENST00000332395 TSHZ1Q6ZSZ6 1077 aa18.53■□□□□ 0.56
DDX28-201ENST00000332395 CCDC105Q8IYK2 499 aa18.53■□□□□ 0.56
DDX28-201ENST00000332395 GRHL1Q9NZI5 618 aa18.53■□□□□ 0.56
DDX28-201ENST00000332395 ATP8A1Q9Y2Q0 1164 aa18.53■□□□□ 0.56
DDX28-201ENST00000332395 LOC102724159A0A0B4J2E5 919 aa18.52■□□□□ 0.56
DDX28-201ENST00000332395 INO80B-WBP1J3KQ70 363 aa18.52■□□□□ 0.56
DDX28-201ENST00000332395 ACKR2O00590 384 aa18.52■□□□□ 0.56
DDX28-201ENST00000332395 FSCN2O14926 492 aa18.52■□□□□ 0.56
DDX28-201ENST00000332395 PROSCO94903 275 aa18.52■□□□□ 0.56
DDX28-201ENST00000332395 NR1D1P20393 614 aa18.52■□□□□ 0.56
DDX28-201ENST00000332395 RPL21P46778 160 aaKnown RBP18.52■□□□□ 0.56
DDX28-201ENST00000332395 CLCN3P51790 818 aa18.52■□□□□ 0.56
DDX28-201ENST00000332395 GNGT1P63211 74 aa18.52■□□□□ 0.56
DDX28-201ENST00000332395 MAMLD1Q13495 774 aa18.52■□□□□ 0.56
DDX28-201ENST00000332395 PWP2Q15269 919 aaKnown RBP18.52■□□□□ 0.56
DDX28-201ENST00000332395 LLGL1Q15334 1064 aa18.52■□□□□ 0.56
DDX28-201ENST00000332395 ATF7IP2Q5U623 682 aa18.52■□□□□ 0.56
DDX28-201ENST00000332395 EFCAB12Q6NXP0 572 aa18.52■□□□□ 0.56
DDX28-201ENST00000332395 PPP1R2P3Q6NXS1 205 aa18.52■□□□□ 0.56
DDX28-201ENST00000332395 MMS22LQ6ZRQ5 1243 aa18.52■□□□□ 0.56
DDX28-201ENST00000332395 SHCBP1Q8NEM2 672 aa18.52■□□□□ 0.56
DDX28-201ENST00000332395 FBXO25Q8TCJ0 367 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms