RNA–Protein interactions for RNA: ENST00000331450.9

LRRC28-202, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 752 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-202ENST00000331450 ZNF697Q5TEC3 545 aa17.33■□□□□ 0.36
LRRC28-202ENST00000331450 CDKAL1Q5VV42 579 aa17.33■□□□□ 0.36
LRRC28-202ENST00000331450 TDRD10Q5VZ19 366 aaKnown RBP17.33■□□□□ 0.36
LRRC28-202ENST00000331450 TRAPPC11Q7Z392 1133 aa17.33■□□□□ 0.36
LRRC28-202ENST00000331450 NAT10Q9H0A0 1025 aaKnown RBP17.33■□□□□ 0.36
LRRC28-202ENST00000331450 LZTS1Q9Y250 596 aa17.33■□□□□ 0.36
LRRC28-202ENST00000331450 LPXNO60711 386 aa17.32■□□□□ 0.36
LRRC28-202ENST00000331450 B3GAT3O94766 335 aa17.32■□□□□ 0.36
LRRC28-202ENST00000331450 POLR2BP30876 1174 aaKnown RBP17.32■□□□□ 0.36
LRRC28-202ENST00000331450 ZNF165P49910 485 aa17.32■□□□□ 0.36
LRRC28-202ENST00000331450 ZNF445P59923 1031 aa17.32■□□□□ 0.36
LRRC28-202ENST00000331450 UBE3AQ05086 875 aa17.32■□□□□ 0.36
LRRC28-202ENST00000331450 GPM6BQ13491 265 aa17.32■□□□□ 0.36
LRRC28-202ENST00000331450 TPD52L1Q16890 204 aaPredicted RBP17.32■□□□□ 0.36
LRRC28-202ENST00000331450 LRSAM1Q6UWE0 723 aa17.32■□□□□ 0.36
LRRC28-202ENST00000331450 DDX53Q86TM3 631 aaKnown RBP17.32■□□□□ 0.36
LRRC28-202ENST00000331450 AOPEPQ8N6M6 819 aa17.32■□□□□ 0.36
LRRC28-202ENST00000331450 LRRC52Q8N7C0 313 aa17.32■□□□□ 0.36
LRRC28-202ENST00000331450 SPPL3Q8TCT6 385 aa17.32■□□□□ 0.36
LRRC28-202ENST00000331450 HASPINQ8TF76 798 aa17.32■□□□□ 0.36
LRRC28-202ENST00000331450 GDPD5Q8WTR4 605 aa17.32■□□□□ 0.36
LRRC28-202ENST00000331450 TMEM169Q96HH4 297 aa17.32■□□□□ 0.36
LRRC28-202ENST00000331450 HSD3B7Q9H2F3 369 aa17.32■□□□□ 0.36
LRRC28-202ENST00000331450 SAMSN1Q9NSI8 373 aaKnown RBP17.32■□□□□ 0.36
LRRC28-202ENST00000331450 SF3B1O75533 1304 aaKnown RBP eCLIP17.31■□□□□ 0.36
LRRC28-202ENST00000331450 GRM6O15303 877 aa17.31■□□□□ 0.36
LRRC28-202ENST00000331450 DNAJB1P25685 340 aa17.31■□□□□ 0.36
LRRC28-202ENST00000331450 GTF2H1P32780 548 aa17.31■□□□□ 0.36
LRRC28-202ENST00000331450 CAMK1Q14012 370 aa17.31■□□□□ 0.36
LRRC28-202ENST00000331450 GRIN2CQ14957 1233 aa17.31■□□□□ 0.36
LRRC28-202ENST00000331450 IQCB1Q15051 598 aa17.31■□□□□ 0.36
LRRC28-202ENST00000331450 DCAF17Q5H9S7 520 aaPredicted RBP17.31■□□□□ 0.36
LRRC28-202ENST00000331450 FUT10Q6P4F1 479 aa17.31■□□□□ 0.36
LRRC28-202ENST00000331450 SV2AQ7L0J3 742 aa17.31■□□□□ 0.36
LRRC28-202ENST00000331450 FAM114A1Q8IWE2 563 aa17.31■□□□□ 0.36
LRRC28-202ENST00000331450 DHX40Q8IX18 779 aaKnown RBP17.31■□□□□ 0.36
LRRC28-202ENST00000331450 GPR62Q9BZJ7 368 aa17.31■□□□□ 0.36
LRRC28-202ENST00000331450 TMEM8AQ9HCN3 771 aa17.31■□□□□ 0.36
LRRC28-202ENST00000331450 ALG13Q9NP73 1137 aaKnown RBP17.31■□□□□ 0.36
LRRC28-202ENST00000331450 RFXAPO00287 272 aa17.3■□□□□ 0.36
LRRC28-202ENST00000331450 SPTLC1O15269 473 aa17.3■□□□□ 0.36
LRRC28-202ENST00000331450 STX10O60499 249 aa17.3■□□□□ 0.36
LRRC28-202ENST00000331450 VNN1O95497 513 aa17.3■□□□□ 0.36
LRRC28-202ENST00000331450 CAVIN2O95810 425 aa17.3■□□□□ 0.36
LRRC28-202ENST00000331450 PAX3P23760 479 aa17.3■□□□□ 0.36
LRRC28-202ENST00000331450 BRCC3P46736 316 aa17.3■□□□□ 0.36
LRRC28-202ENST00000331450 GCLMP48507 274 aa17.3■□□□□ 0.36
LRRC28-202ENST00000331450 LILRA4P59901 499 aa17.3■□□□□ 0.36
LRRC28-202ENST00000331450 TCERG1LQ5VWI1 586 aa17.3■□□□□ 0.36
LRRC28-202ENST00000331450 POF1BQ8WVV4 589 aa17.3■□□□□ 0.36
LRRC28-202ENST00000331450 SUSD3Q96L08 255 aa17.3■□□□□ 0.36
LRRC28-202ENST00000331450 ZNF560Q96MR9 790 aa17.3■□□□□ 0.36
LRRC28-202ENST00000331450 HERC2P3Q9BVR0 1158 aa17.3■□□□□ 0.36
LRRC28-202ENST00000331450 LMAN2LQ9H0V9 348 aa17.3■□□□□ 0.36
LRRC28-202ENST00000331450 ZBP1Q9H171 429 aa17.3■□□□□ 0.36
LRRC28-202ENST00000331450 FANCLQ9NW38 375 aa17.3■□□□□ 0.36
LRRC28-202ENST00000331450 AGAP1Q9UPQ3 857 aa17.3■□□□□ 0.36
LRRC28-202ENST00000331450 TULP1O00294 542 aaPredicted RBP17.29■□□□□ 0.36
LRRC28-202ENST00000331450 TADA2AO75478 443 aa17.29■□□□□ 0.36
LRRC28-202ENST00000331450 STAU1O95793 577 aaKnown RBP17.29■□□□□ 0.36
LRRC28-202ENST00000331450 CST3P01034 146 aaPredicted RBP17.29■□□□□ 0.36
LRRC28-202ENST00000331450 SOD2P04179 222 aa17.29■□□□□ 0.36
LRRC28-202ENST00000331450 ZNF18P17022 549 aa17.29■□□□□ 0.36
LRRC28-202ENST00000331450 EEF1GP26641 437 aaKnown RBP17.29■□□□□ 0.36
LRRC28-202ENST00000331450 PNPLA4P41247 253 aa17.29■□□□□ 0.36
LRRC28-202ENST00000331450 TAF6P49848 677 aa17.29■□□□□ 0.36
LRRC28-202ENST00000331450 MXI1P50539 228 aa17.29■□□□□ 0.36
LRRC28-202ENST00000331450 RBP5P82980 135 aa17.29■□□□□ 0.36
LRRC28-202ENST00000331450 KRT17Q04695 432 aa17.29■□□□□ 0.36
LRRC28-202ENST00000331450 ELAVL2Q12926 359 aaKnown RBP17.29■□□□□ 0.36
LRRC28-202ENST00000331450 CBWD6Q4V339 395 aa17.29■□□□□ 0.36
LRRC28-202ENST00000331450 TIGD5Q53EQ6 642 aa17.29■□□□□ 0.36
LRRC28-202ENST00000331450 HSP90AA4PQ58FG1 418 aa17.29■□□□□ 0.36
LRRC28-202ENST00000331450 CBWD3Q5JTY5 395 aa17.29■□□□□ 0.36
LRRC28-202ENST00000331450 CBWD5Q5RIA9 395 aa17.29■□□□□ 0.36
LRRC28-202ENST00000331450 KRT39Q6A163 491 aa17.29■□□□□ 0.36
LRRC28-202ENST00000331450 XYLT2Q9H1B5 865 aa17.29■□□□□ 0.36
LRRC28-202ENST00000331450 PRDM12Q9H4Q4 367 aa17.29■□□□□ 0.36
LRRC28-202ENST00000331450 CBX8Q9HC52 389 aa17.29■□□□□ 0.36
LRRC28-202ENST00000331450 STK39Q9UEW8 545 aa17.29■□□□□ 0.36
LRRC28-202ENST00000331450 COQ4Q9Y3A0 265 aa17.29■□□□□ 0.36
LRRC28-202ENST00000331450 NUB1Q9Y5A7 615 aa17.29■□□□□ 0.36
LRRC28-202ENST00000331450 PLXNA3P51805 1871 aa17.29■□□□□ 0.36
LRRC28-202ENST00000331450 KCNJ18B7U540 433 aa17.28■□□□□ 0.36
LRRC28-202ENST00000331450 I3L4J1 428 aa17.28■□□□□ 0.36
LRRC28-202ENST00000331450 M0QZQ0 153 aa17.28■□□□□ 0.36
LRRC28-202ENST00000331450 FSCN2O14926 492 aa17.28■□□□□ 0.36
LRRC28-202ENST00000331450 PMM2O15305 246 aa17.28■□□□□ 0.36
LRRC28-202ENST00000331450 KRT19P08727 400 aa17.28■□□□□ 0.36
LRRC28-202ENST00000331450 FGFR3P22607 806 aa17.28■□□□□ 0.36
LRRC28-202ENST00000331450 FMO5P49326 533 aa17.28■□□□□ 0.36
LRRC28-202ENST00000331450 BIRC3Q13489 604 aa17.28■□□□□ 0.36
LRRC28-202ENST00000331450 KCNJ12Q14500 433 aa17.28■□□□□ 0.36
LRRC28-202ENST00000331450 SV2CQ496J9 727 aa17.28■□□□□ 0.36
LRRC28-202ENST00000331450 TCP11X2Q5H9J9 407 aa17.28■□□□□ 0.36
LRRC28-202ENST00000331450 Q7L0L9 218 aa17.28■□□□□ 0.36
LRRC28-202ENST00000331450 TAS1R1Q7RTX1 841 aa17.28■□□□□ 0.36
LRRC28-202ENST00000331450 VPS52Q8N1B4 723 aa17.28■□□□□ 0.36
LRRC28-202ENST00000331450 TAS1R2Q8TE23 839 aa17.28■□□□□ 0.36
LRRC28-202ENST00000331450 VRTNQ9H8Y1 702 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms