RNA–Protein interactions for RNA: ENST00000328796.4

CLDN6-201, Transcript of claudin 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDN6, Length 1,369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6-201ENST00000328796 NUB1Q9Y5A7 615 aa18.22■□□□□ 0.51
CLDN6-201ENST00000328796 I3L4J1 428 aa18.21■□□□□ 0.51
CLDN6-201ENST00000328796 BIN1O00499 593 aa18.21■□□□□ 0.51
CLDN6-201ENST00000328796 C2CD2LO14523 706 aa18.21■□□□□ 0.51
CLDN6-201ENST00000328796 LINC01565O15544 149 aa18.21■□□□□ 0.51
CLDN6-201ENST00000328796 GLP2RO95838 553 aa18.21■□□□□ 0.51
CLDN6-201ENST00000328796 CNPP09543 421 aaKnown RBP18.21■□□□□ 0.51
CLDN6-201ENST00000328796 CD44P16070 742 aaKnown RBP18.21■□□□□ 0.51
CLDN6-201ENST00000328796 PAX3P23760 479 aa18.21■□□□□ 0.51
CLDN6-201ENST00000328796 NR2F2P24468 414 aa18.21■□□□□ 0.51
CLDN6-201ENST00000328796 CA8P35219 290 aa18.21■□□□□ 0.51
CLDN6-201ENST00000328796 LTBRP36941 435 aa18.21■□□□□ 0.51
CLDN6-201ENST00000328796 PPP1R2P41236 205 aa18.21■□□□□ 0.51
CLDN6-201ENST00000328796 CASP4P49662 377 aa18.21■□□□□ 0.51
CLDN6-201ENST00000328796 ISM2Q6H9L7 571 aa18.21■□□□□ 0.51
CLDN6-201ENST00000328796 WDR49Q8IV35 697 aa18.21■□□□□ 0.51
CLDN6-201ENST00000328796 C1orf127Q8N9H9 656 aa18.21■□□□□ 0.51
CLDN6-201ENST00000328796 CXorf38Q8TB03 319 aa18.21■□□□□ 0.51
CLDN6-201ENST00000328796 HLA-CQ95604 372 aa18.21■□□□□ 0.51
CLDN6-201ENST00000328796 FAM84AQ96KN4 292 aa18.21■□□□□ 0.51
CLDN6-201ENST00000328796 KLHL5Q96PQ7 755 aa18.21■□□□□ 0.51
CLDN6-201ENST00000328796 CGRRF1Q99675 332 aa18.21■□□□□ 0.51
CLDN6-201ENST00000328796 EMILIN2Q9BXX0 1053 aa18.21■□□□□ 0.51
CLDN6-201ENST00000328796 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.21■□□□□ 0.51
CLDN6-201ENST00000328796 FNIP2Q9P278 1114 aa18.21■□□□□ 0.51
CLDN6-201ENST00000328796 THEGQ9P2T0 379 aa18.21■□□□□ 0.51
CLDN6-201ENST00000328796 PTPRJQ12913 1337 aa18.21■□□□□ 0.51
CLDN6-201ENST00000328796 M0QZQ0 153 aa18.2■□□□□ 0.5
CLDN6-201ENST00000328796 SYN3O14994 580 aa18.2■□□□□ 0.5
CLDN6-201ENST00000328796 MAPK13O15264 365 aa18.2■□□□□ 0.5
CLDN6-201ENST00000328796 RPL13P26373 211 aaKnown RBP18.2■□□□□ 0.5
CLDN6-201ENST00000328796 TKTP29401 623 aaKnown RBP18.2■□□□□ 0.5
CLDN6-201ENST00000328796 MCM4P33991 863 aa18.2■□□□□ 0.5
CLDN6-201ENST00000328796 LILRA4P59901 499 aa18.2■□□□□ 0.5
CLDN6-201ENST00000328796 STIM1Q13586 685 aa18.2■□□□□ 0.5
CLDN6-201ENST00000328796 LMBRD2Q68DH5 695 aaPredicted RBP18.2■□□□□ 0.5
CLDN6-201ENST00000328796 TMEM184AQ6ZMB5 413 aa18.2■□□□□ 0.5
CLDN6-201ENST00000328796 VN1R2Q8NFZ6 395 aa18.2■□□□□ 0.5
CLDN6-201ENST00000328796 OR5B17Q8NGF7 314 aa18.2■□□□□ 0.5
CLDN6-201ENST00000328796 LNX1Q8TBB1 728 aaPredicted RBP18.2■□□□□ 0.5
CLDN6-201ENST00000328796 PLEKHO2Q8TD55 490 aa18.2■□□□□ 0.5
CLDN6-201ENST00000328796 PARD3BQ8TEW8 1205 aa18.2■□□□□ 0.5
CLDN6-201ENST00000328796 DHTKD1Q96HY7 919 aaPredicted RBP18.2■□□□□ 0.5
CLDN6-201ENST00000328796 MTMR12Q9C0I1 747 aa18.2■□□□□ 0.5
CLDN6-201ENST00000328796 NUP62CLQ9H1M0 184 aa18.2■□□□□ 0.5
CLDN6-201ENST00000328796 CLDND1Q9NY35 253 aa18.2■□□□□ 0.5
CLDN6-201ENST00000328796 ITGA11Q9UKX5 1188 aa18.2■□□□□ 0.5
CLDN6-201ENST00000328796 PPP1R3GB7ZBB8 358 aa18.19■□□□□ 0.5
CLDN6-201ENST00000328796 PSMA7O14818 248 aa18.19■□□□□ 0.5
CLDN6-201ENST00000328796 TEX28O15482 410 aa18.19■□□□□ 0.5
CLDN6-201ENST00000328796 TBX10O75333 385 aa18.19■□□□□ 0.5
CLDN6-201ENST00000328796 TMEM191BP0C7N4 346 aa18.19■□□□□ 0.5
CLDN6-201ENST00000328796 CCNE1P24864 410 aa18.19■□□□□ 0.5
CLDN6-201ENST00000328796 CREMQ03060 361 aa18.19■□□□□ 0.5
CLDN6-201ENST00000328796 ADAM9Q13443 819 aa18.19■□□□□ 0.5
CLDN6-201ENST00000328796 DUOXA2Q1HG44 320 aa18.19■□□□□ 0.5
CLDN6-201ENST00000328796 PDXDC1Q6P996 788 aa18.19■□□□□ 0.5
CLDN6-201ENST00000328796 PRSS55Q6UWB4 352 aaPredicted RBP18.19■□□□□ 0.5
CLDN6-201ENST00000328796 CEP57Q86XR8 500 aa18.19■□□□□ 0.5
CLDN6-201ENST00000328796 ZC3H3Q8IXZ2 948 aaKnown RBP18.19■□□□□ 0.5
CLDN6-201ENST00000328796 SLC22A17Q8WUG5 538 aa18.19■□□□□ 0.5
CLDN6-201ENST00000328796 CCDC127Q96BQ5 260 aa18.19■□□□□ 0.5
CLDN6-201ENST00000328796 ANKRD36BP1Q96IX9 119 aa18.19■□□□□ 0.5
CLDN6-201ENST00000328796 FNBP1Q96RU3 617 aa18.19■□□□□ 0.5
CLDN6-201ENST00000328796 SIX4Q9UIU6 781 aa18.19■□□□□ 0.5
CLDN6-201ENST00000328796 PCDHB8Q9UN66 801 aa18.19■□□□□ 0.5
CLDN6-201ENST00000328796 FRMD4BQ9Y2L6 1034 aa18.19■□□□□ 0.5
CLDN6-201ENST00000328796 MTCL1Q9Y4B5 1905 aaKnown RBP18.19■□□□□ 0.5
CLDN6-201ENST00000328796 PLXNA3P51805 1871 aa18.19■□□□□ 0.5
CLDN6-201ENST00000328796 NCOR1O75376 2440 aa18.19■□□□□ 0.5
CLDN6-201ENST00000328796 SPTLC1O15269 473 aa18.18■□□□□ 0.5
CLDN6-201ENST00000328796 AKAP3O75969 853 aa18.18■□□□□ 0.5
CLDN6-201ENST00000328796 ITGB3P05106 788 aa18.18■□□□□ 0.5
CLDN6-201ENST00000328796 DLATP10515 647 aaKnown RBP18.18■□□□□ 0.5
CLDN6-201ENST00000328796 PMS1P54277 932 aaKnown RBP18.18■□□□□ 0.5
CLDN6-201ENST00000328796 CLDN10P78369 228 aa18.18■□□□□ 0.5
CLDN6-201ENST00000328796 RBM10P98175 930 aaKnown RBP18.18■□□□□ 0.5
CLDN6-201ENST00000328796 LRRC63Q05C16 580 aa18.18■□□□□ 0.5
CLDN6-201ENST00000328796 DLX2Q07687 328 aaPredicted RBP18.18■□□□□ 0.5
CLDN6-201ENST00000328796 MRPL58Q14197 206 aaKnown RBP18.18■□□□□ 0.5
CLDN6-201ENST00000328796 PSMD5Q16401 504 aa18.18■□□□□ 0.5
CLDN6-201ENST00000328796 CEP135Q66GS9 1140 aa18.18■□□□□ 0.5
CLDN6-201ENST00000328796 ANKRD40Q6AI12 368 aa18.18■□□□□ 0.5
CLDN6-201ENST00000328796 FOXR2Q6PJQ5 311 aa18.18■□□□□ 0.5
CLDN6-201ENST00000328796 PPFIBP1Q86W92 1011 aa18.18■□□□□ 0.5
CLDN6-201ENST00000328796 TMC2Q8TDI7 906 aa18.18■□□□□ 0.5
CLDN6-201ENST00000328796 POP1Q99575 1024 aaKnown RBP18.18■□□□□ 0.5
CLDN6-201ENST00000328796 TSG101Q99816 390 aa18.18■□□□□ 0.5
CLDN6-201ENST00000328796 CLEC1BQ9P126 229 aa18.18■□□□□ 0.5
CLDN6-201ENST00000328796 MTRRQ9UBK8 725 aa18.18■□□□□ 0.5
CLDN6-201ENST00000328796 HCFC2Q9Y5Z7 792 aa18.18■□□□□ 0.5
CLDN6-201ENST00000328796 TRIM49BA6NDI0 452 aa18.17■□□□□ 0.5
CLDN6-201ENST00000328796 TULP1O00294 542 aaPredicted RBP18.17■□□□□ 0.5
CLDN6-201ENST00000328796 C1RP00736 705 aa18.17■□□□□ 0.5
CLDN6-201ENST00000328796 TNNC2P02585 160 aa18.17■□□□□ 0.5
CLDN6-201ENST00000328796 ADH1AP07327 375 aa18.17■□□□□ 0.5
CLDN6-201ENST00000328796 RPL17P18621 184 aaKnown RBP18.17■□□□□ 0.5
CLDN6-201ENST00000328796 TNNI1P19237 187 aa18.17■□□□□ 0.5
CLDN6-201ENST00000328796 KLRC2P26717 231 aa18.17■□□□□ 0.5
CLDN6-201ENST00000328796 POLR2BP30876 1174 aaKnown RBP18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms