RNA–Protein interactions for RNA: ENST00000324938.9

LIMS2-201, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS2, Length 2,111 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-201ENST00000324938 R3HDMLQ9H3Y0 253 aa22.83■■□□□ 1.25
LIMS2-201ENST00000324938 SBDSQ9Y3A5 250 aaKnown RBP eCLIP22.83■■□□□ 1.25
LIMS2-201ENST00000324938 UTRNP46939 3433 aa22.82■■□□□ 1.24
LIMS2-201ENST00000324938 ECEL1O95672 775 aa22.82■■□□□ 1.24
LIMS2-201ENST00000324938 HPDP32754 393 aaPredicted RBP22.82■■□□□ 1.24
LIMS2-201ENST00000324938 TNFSF9P41273 254 aa22.82■■□□□ 1.24
LIMS2-201ENST00000324938 CCT5P48643 541 aa22.82■■□□□ 1.24
LIMS2-201ENST00000324938 ZNF132P52740 706 aa22.82■■□□□ 1.24
LIMS2-201ENST00000324938 KRT71Q3SY84 523 aa22.82■■□□□ 1.24
LIMS2-201ENST00000324938 MAIP1Q8WWC4 291 aa22.82■■□□□ 1.24
LIMS2-201ENST00000324938 DDX27Q96GQ7 796 aaKnown RBP22.82■■□□□ 1.24
LIMS2-201ENST00000324938 ADAM22Q9P0K1 906 aa22.82■■□□□ 1.24
LIMS2-201ENST00000324938 IGKV6-21A0A0C4DH24 114 aa22.82■■□□□ 1.24
LIMS2-201ENST00000324938 SRRM3A6NNA2 597 aaPredicted RBP22.82■■□□□ 1.24
LIMS2-201ENST00000324938 CXCL11O14625 94 aa22.82■■□□□ 1.24
LIMS2-201ENST00000324938 ASS1P00966 412 aaKnown RBP22.82■■□□□ 1.24
LIMS2-201ENST00000324938 IFFO1Q0D2I5 559 aa22.82■■□□□ 1.24
LIMS2-201ENST00000324938 LAMTOR4Q0VGL1 99 aa22.82■■□□□ 1.24
LIMS2-201ENST00000324938 MKRN4PQ13434 485 aaPredicted RBP22.82■■□□□ 1.24
LIMS2-201ENST00000324938 MXD4Q14582 209 aaPredicted RBP22.82■■□□□ 1.24
LIMS2-201ENST00000324938 C2CD6Q53TS8 623 aa22.82■■□□□ 1.24
LIMS2-201ENST00000324938 SGO2Q562F6 1265 aa22.82■■□□□ 1.24
LIMS2-201ENST00000324938 PASD1Q8IV76 773 aa22.82■■□□□ 1.24
LIMS2-201ENST00000324938 EXOC8Q8IYI6 725 aa22.82■■□□□ 1.24
LIMS2-201ENST00000324938 ACO2Q99798 780 aaKnown RBP22.82■■□□□ 1.24
LIMS2-201ENST00000324938 MRPL47Q9HD33 250 aaKnown RBP22.82■■□□□ 1.24
LIMS2-201ENST00000324938 ZBTB42B2RXF5 422 aa22.81■■□□□ 1.24
LIMS2-201ENST00000324938 THAP12O43422 761 aa22.81■■□□□ 1.24
LIMS2-201ENST00000324938 KCNJ1P48048 391 aa22.81■■□□□ 1.24
LIMS2-201ENST00000324938 C1QBPQ07021 282 aaKnown RBP22.81■■□□□ 1.24
LIMS2-201ENST00000324938 CELF3Q5SZQ8 465 aaKnown RBP22.81■■□□□ 1.24
LIMS2-201ENST00000324938 PLEKHA7Q6IQ23 1121 aa22.81■■□□□ 1.24
LIMS2-201ENST00000324938 PHLDB2Q86SQ0 1253 aa22.81■■□□□ 1.24
LIMS2-201ENST00000324938 ZBTB8OSQ8IWT0 167 aa22.81■■□□□ 1.24
LIMS2-201ENST00000324938 ART4Q93070 314 aa22.81■■□□□ 1.24
LIMS2-201ENST00000324938 EPN3Q9H201 632 aa22.81■■□□□ 1.24
LIMS2-201ENST00000324938 SLC12A6Q9UHW9 1150 aa22.81■■□□□ 1.24
LIMS2-201ENST00000324938 AGTPBP1Q9UPW5 1226 aa22.81■■□□□ 1.24
LIMS2-201ENST00000324938 PTPN22Q9Y2R2 807 aa22.81■■□□□ 1.24
LIMS2-201ENST00000324938 SCINQ9Y6U3 715 aa22.81■■□□□ 1.24
LIMS2-201ENST00000324938 MYO1CO00159 1063 aa22.81■■□□□ 1.24
LIMS2-201ENST00000324938 ABLIM1O14639 778 aa22.81■■□□□ 1.24
LIMS2-201ENST00000324938 OGTO15294 1046 aa22.81■■□□□ 1.24
LIMS2-201ENST00000324938 PSTPIP1O43586 416 aa22.81■■□□□ 1.24
LIMS2-201ENST00000324938 PRKCBP05771 671 aa22.81■■□□□ 1.24
LIMS2-201ENST00000324938 MARK3P27448 753 aa22.81■■□□□ 1.24
LIMS2-201ENST00000324938 PTGISQ16647 500 aa22.81■■□□□ 1.24
LIMS2-201ENST00000324938 HSDL1Q3SXM5 330 aa22.81■■□□□ 1.24
LIMS2-201ENST00000324938 PLPPR4Q7Z2D5 763 aa22.81■■□□□ 1.24
LIMS2-201ENST00000324938 ZBTB33Q86T24 672 aa22.81■■□□□ 1.24
LIMS2-201ENST00000324938 HOOK3Q86VS8 718 aa22.81■■□□□ 1.24
LIMS2-201ENST00000324938 TRIM50Q86XT4 487 aa22.81■■□□□ 1.24
LIMS2-201ENST00000324938 ZSWIM8A7E2V4 1837 aa22.8■■□□□ 1.24
LIMS2-201ENST00000324938 SPDYE5A6NIY4 337 aa22.8■■□□□ 1.24
LIMS2-201ENST00000324938 PGK2P07205 417 aa22.8■■□□□ 1.24
LIMS2-201ENST00000324938 MCL1Q07820 350 aa22.8■■□□□ 1.24
LIMS2-201ENST00000324938 MAMLD1Q13495 774 aa22.8■■□□□ 1.24
LIMS2-201ENST00000324938 DENND2CQ68D51 928 aa22.8■■□□□ 1.24
LIMS2-201ENST00000324938 CLMNQ96JQ2 1002 aa22.8■■□□□ 1.24
LIMS2-201ENST00000324938 TCHPQ9BT92 498 aa22.8■■□□□ 1.24
LIMS2-201ENST00000324938 C2orf40Q9H1Z8 148 aa22.8■■□□□ 1.24
LIMS2-201ENST00000324938 RABEP2Q9H5N1 569 aa22.8■■□□□ 1.24
LIMS2-201ENST00000324938 BCCIPQ9P287 314 aaKnown RBP eCLIP22.8■■□□□ 1.24
LIMS2-201ENST00000324938 NOVA2Q9UNW9 492 aaKnown RBP22.8■■□□□ 1.24
LIMS2-201ENST00000324938 KCNH4Q9UQ05 1017 aa22.8■■□□□ 1.24
LIMS2-201ENST00000324938 DNAJC25-GNG10A0A024R161 153 aa22.79■■□□□ 1.24
LIMS2-201ENST00000324938 EBAG9O00559 213 aa22.79■■□□□ 1.24
LIMS2-201ENST00000324938 NOP56O00567 594 aaKnown RBP22.79■■□□□ 1.24
LIMS2-201ENST00000324938 MAN1A1P33908 653 aa22.79■■□□□ 1.24
LIMS2-201ENST00000324938 SURF1Q15526 300 aa22.79■■□□□ 1.24
LIMS2-201ENST00000324938 MAPK6Q16659 721 aa22.79■■□□□ 1.24
LIMS2-201ENST00000324938 MMS22LQ6ZRQ5 1243 aa22.79■■□□□ 1.24
LIMS2-201ENST00000324938 ANKRD13AQ8IZ07 590 aa22.79■■□□□ 1.24
LIMS2-201ENST00000324938 RNF149Q8NC42 400 aa22.79■■□□□ 1.24
LIMS2-201ENST00000324938 GADD45GIP1Q8TAE8 222 aaPredicted RBP22.79■■□□□ 1.24
LIMS2-201ENST00000324938 C1orf54Q8WWF1 131 aa22.79■■□□□ 1.24
LIMS2-201ENST00000324938 RNF25Q96BH1 459 aaPredicted RBP22.79■■□□□ 1.24
LIMS2-201ENST00000324938 TLCD1Q96CP7 247 aa22.79■■□□□ 1.24
LIMS2-201ENST00000324938 LRRC4CQ9HCJ2 640 aa22.79■■□□□ 1.24
LIMS2-201ENST00000324938 TXNRD2Q9NNW7 524 aa22.79■■□□□ 1.24
LIMS2-201ENST00000324938 EVPLQ92817 2033 aa22.79■■□□□ 1.24
LIMS2-201ENST00000324938 NDUFAB1O14561 156 aa22.79■■□□□ 1.24
LIMS2-201ENST00000324938 SRGAP2CP0DJJ0 459 aa22.79■■□□□ 1.24
LIMS2-201ENST00000324938 PPP2R2AP63151 447 aa22.79■■□□□ 1.24
LIMS2-201ENST00000324938 PLCB4Q15147 1175 aa22.79■■□□□ 1.24
LIMS2-201ENST00000324938 PPP1R7Q15435 360 aa22.79■■□□□ 1.24
LIMS2-201ENST00000324938 SCARA3Q6AZY7 606 aa22.79■■□□□ 1.24
LIMS2-201ENST00000324938 LRRC71Q8N4P6 559 aa22.79■■□□□ 1.24
LIMS2-201ENST00000324938 MTMR12Q9C0I1 747 aa22.79■■□□□ 1.24
LIMS2-201ENST00000324938 CPSF3Q9UKF6 684 aaKnown RBP22.79■■□□□ 1.24
LIMS2-201ENST00000324938 CST3P01034 146 aaPredicted RBP22.78■■□□□ 1.24
LIMS2-201ENST00000324938 KRT17Q04695 432 aa22.78■■□□□ 1.24
LIMS2-201ENST00000324938 SLMAPQ14BN4 828 aa22.78■■□□□ 1.24
LIMS2-201ENST00000324938 SYDE1Q6ZW31 735 aaPredicted RBP22.78■■□□□ 1.24
LIMS2-201ENST00000324938 RHOT1Q8IXI2 618 aa22.78■■□□□ 1.24
LIMS2-201ENST00000324938 ZNF606Q8WXB4 792 aa22.78■■□□□ 1.24
LIMS2-201ENST00000324938 HERPUD2Q9BSE4 406 aa22.78■■□□□ 1.24
LIMS2-201ENST00000324938 WHRNQ9P202 907 aa22.78■■□□□ 1.24
LIMS2-201ENST00000324938 RBPJLQ9UBG7 517 aa22.78■■□□□ 1.24
LIMS2-201ENST00000324938 SHBGP04278 402 aa22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms