RNA–Protein interactions for RNA: ENST00000324288.12

CIITA-201, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIITA, Length 11,952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-201ENST00000324288 SH2D3AQ9BRG2 576 aa8.28□□□□□ -1.08
CIITA-201ENST00000324288 MYL2P10916 166 aa8.28□□□□□ -1.08
CIITA-201ENST00000324288 GRIK1P39086 918 aa8.28□□□□□ -1.08
CIITA-201ENST00000324288 TRIP4Q15650 581 aaPredicted RBP8.28□□□□□ -1.08
CIITA-201ENST00000324288 LLGL2Q6P1M3 1020 aa8.28□□□□□ -1.08
CIITA-201ENST00000324288 CCDC17Q96LX7 622 aa8.28□□□□□ -1.08
CIITA-201ENST00000324288 MRPL1Q9BYD6 325 aaKnown RBP8.28□□□□□ -1.08
CIITA-201ENST00000324288 SLC9A1P19634 815 aa8.28□□□□□ -1.08
CIITA-201ENST00000324288 COG2Q14746 738 aa8.28□□□□□ -1.08
CIITA-201ENST00000324288 TRIM69Q86WT6 500 aa8.28□□□□□ -1.08
CIITA-201ENST00000324288 QTRT2Q9H974 415 aaKnown RBP8.28□□□□□ -1.08
CIITA-201ENST00000324288 CEP72Q9P209 647 aa8.28□□□□□ -1.08
CIITA-201ENST00000324288 PITPNM2Q9BZ72 1349 aa8.28□□□□□ -1.08
CIITA-201ENST00000324288 ATP10BO94823 1461 aa8.28□□□□□ -1.08
CIITA-201ENST00000324288 VHLP40337 213 aa8.28□□□□□ -1.08
CIITA-201ENST00000324288 SLC16A1P53985 500 aa8.28□□□□□ -1.08
CIITA-201ENST00000324288 DSG1Q02413 1049 aa8.28□□□□□ -1.08
CIITA-201ENST00000324288 C16orf89Q6UX73 402 aa8.28□□□□□ -1.08
CIITA-201ENST00000324288 GLYCTKQ8IVS8 523 aa8.28□□□□□ -1.08
CIITA-201ENST00000324288 EFHBQ8N7U6 833 aa8.28□□□□□ -1.08
CIITA-201ENST00000324288 GFM2Q969S9 779 aaKnown RBP8.28□□□□□ -1.08
CIITA-201ENST00000324288 APOL5Q9BWW9 433 aa8.28□□□□□ -1.08
CIITA-201ENST00000324288 TRIM45Q9H8W5 580 aaPredicted RBP8.28□□□□□ -1.08
CIITA-201ENST00000324288 SESN1Q9Y6P5 492 aa8.28□□□□□ -1.08
CIITA-201ENST00000324288 MYH14Q7Z406 1995 aaKnown RBP8.28□□□□□ -1.08
CIITA-201ENST00000324288 KIAA0232Q92628 1395 aa8.28□□□□□ -1.08
CIITA-201ENST00000324288 RGS5O15539 181 aa8.28□□□□□ -1.08
CIITA-201ENST00000324288 RC3H1Q5TC82 1133 aaKnown RBP8.28□□□□□ -1.08
CIITA-201ENST00000324288 NOA1Q8NC60 698 aaKnown RBP8.28□□□□□ -1.08
CIITA-201ENST00000324288 BEST2Q8NFU1 509 aa8.28□□□□□ -1.08
CIITA-201ENST00000324288 DCUN1D1Q96GG9 259 aa8.28□□□□□ -1.08
CIITA-201ENST00000324288 GABBR1Q9UBS5 961 aa8.28□□□□□ -1.08
CIITA-201ENST00000324288 PCDHA6Q9UN73 950 aa8.28□□□□□ -1.08
CIITA-201ENST00000324288 PCDHA8Q9Y5H6 950 aa8.28□□□□□ -1.08
CIITA-201ENST00000324288 CABIN1Q9Y6J0 2220 aa8.28□□□□□ -1.08
CIITA-201ENST00000324288 PODXLO00592 558 aa8.28□□□□□ -1.08
CIITA-201ENST00000324288 KCNJ1P48048 391 aa8.28□□□□□ -1.08
CIITA-201ENST00000324288 CELF4Q9BZC1 486 aaKnown RBP8.28□□□□□ -1.08
CIITA-201ENST00000324288 BATF3Q9NR55 127 aa8.28□□□□□ -1.08
CIITA-201ENST00000324288 FAM32AQ9Y421 112 aaKnown RBP8.28□□□□□ -1.08
CIITA-201ENST00000324288 C16orf96A6NNT2 1141 aa8.28□□□□□ -1.08
CIITA-201ENST00000324288 PDZK1P1A8MUH7 402 aa8.28□□□□□ -1.08
CIITA-201ENST00000324288 KCNN4O15554 427 aa8.28□□□□□ -1.08
CIITA-201ENST00000324288 EIF3EP60228 445 aaKnown RBP8.28□□□□□ -1.08
CIITA-201ENST00000324288 MAPK6Q16659 721 aa8.28□□□□□ -1.08
CIITA-201ENST00000324288 NAALADL2Q58DX5 795 aa8.28□□□□□ -1.08
CIITA-201ENST00000324288 SWSAP1Q6NVH7 229 aa8.28□□□□□ -1.08
CIITA-201ENST00000324288 ANKRD7Q92527 254 aa8.28□□□□□ -1.08
CIITA-201ENST00000324288 KCNK16Q96T55 309 aa8.28□□□□□ -1.08
CIITA-201ENST00000324288 PIF1Q9H611 641 aa8.28□□□□□ -1.08
CIITA-201ENST00000324288 FAM153AQ9UHL3 310 aa8.28□□□□□ -1.08
CIITA-201ENST00000324288 ABCC10Q5T3U5 1492 aa8.28□□□□□ -1.08
CIITA-201ENST00000324288 TMEM120BA0PK00 339 aa8.28□□□□□ -1.08
CIITA-201ENST00000324288 PRPF3O43395 683 aaKnown RBP8.28□□□□□ -1.08
CIITA-201ENST00000324288 SPATA33Q96N06 139 aa8.28□□□□□ -1.08
CIITA-201ENST00000324288 HAO1Q9UJM8 370 aa8.28□□□□□ -1.08
CIITA-201ENST00000324288 SNX12Q9UMY4 172 aa8.28□□□□□ -1.08
CIITA-201ENST00000324288 MEI4A8MW99 385 aa8.28□□□□□ -1.08
CIITA-201ENST00000324288 KRT16P08779 473 aa8.28□□□□□ -1.08
CIITA-201ENST00000324288 BCAR1P56945 870 aa8.28□□□□□ -1.08
CIITA-201ENST00000324288 TMEM62Q0P6H9 643 aa8.28□□□□□ -1.08
CIITA-201ENST00000324288 CYB5D1Q6P9G0 228 aa8.28□□□□□ -1.08
CIITA-201ENST00000324288 BARGINQ6ZT62 677 aa8.28□□□□□ -1.08
CIITA-201ENST00000324288 LEMD3Q9Y2U8 911 aa8.28□□□□□ -1.08
CIITA-201ENST00000324288 EFCAB14O75071 495 aa8.27□□□□□ -1.08
CIITA-201ENST00000324288 PCP11498 1178 aaKnown RBP8.27□□□□□ -1.08
CIITA-201ENST00000324288 HMOX2P30519 316 aa8.27□□□□□ -1.08
CIITA-201ENST00000324288 ABCE1P61221 599 aaKnown RBP8.27□□□□□ -1.08
CIITA-201ENST00000324288 ZCWPW2Q504Y3 356 aa8.27□□□□□ -1.08
CIITA-201ENST00000324288 EFHC2Q5JST6 749 aa8.27□□□□□ -1.08
CIITA-201ENST00000324288 VN1R5Q7Z5H4 357 aa8.27□□□□□ -1.08
CIITA-201ENST00000324288 FGD2Q7Z6J4 655 aa8.27□□□□□ -1.08
CIITA-201ENST00000324288 SLC25A41Q8N5S1 370 aa8.27□□□□□ -1.08
CIITA-201ENST00000324288 ZFP42Q96MM3 310 aa8.27□□□□□ -1.08
CIITA-201ENST00000324288 GPBP1L1Q9HC44 474 aaPredicted RBP8.27□□□□□ -1.08
CIITA-201ENST00000324288 HEY2Q9UBP5 337 aa8.27□□□□□ -1.08
CIITA-201ENST00000324288 XPO7Q9UIA9 1087 aaKnown RBP8.27□□□□□ -1.08
CIITA-201ENST00000324288 RAD51CO43502 376 aa8.27□□□□□ -1.08
CIITA-201ENST00000324288 MFSD4BQ5TF39 518 aa8.27□□□□□ -1.08
CIITA-201ENST00000324288 PGBD3Q8N328 593 aa8.27□□□□□ -1.08
CIITA-201ENST00000324288 UBASH3BQ8TF42 649 aa8.27□□□□□ -1.08
CIITA-201ENST00000324288 PLEKHA8Q96JA3 519 aa8.27□□□□□ -1.08
CIITA-201ENST00000324288 TAF4O00268 1085 aa8.27□□□□□ -1.09
CIITA-201ENST00000324288 ASNA1O43681 348 aa8.27□□□□□ -1.09
CIITA-201ENST00000324288 TAF5Q15542 800 aa8.27□□□□□ -1.09
CIITA-201ENST00000324288 MAPRE2Q15555 327 aa8.27□□□□□ -1.09
CIITA-201ENST00000324288 OTUB1Q96FW1 271 aaPredicted RBP8.27□□□□□ -1.09
CIITA-201ENST00000324288 SCN3BQ9NY72 215 aa8.27□□□□□ -1.09
CIITA-201ENST00000324288 DNAJC5BQ9UF47 199 aa8.27□□□□□ -1.09
CIITA-201ENST00000324288 PRR23AA6NEV1 266 aa8.27□□□□□ -1.09
CIITA-201ENST00000324288 SNAP23O00161 211 aa8.27□□□□□ -1.09
CIITA-201ENST00000324288 TLR2O60603 784 aa8.27□□□□□ -1.09
CIITA-201ENST00000324288 SRP72O76094 671 aaKnown RBP8.27□□□□□ -1.09
CIITA-201ENST00000324288 EPB42P16452 691 aa8.27□□□□□ -1.09
CIITA-201ENST00000324288 PTK7Q13308 1070 aa8.27□□□□□ -1.09
CIITA-201ENST00000324288 ANKS3Q6ZW76 656 aa8.27□□□□□ -1.09
CIITA-201ENST00000324288 FMR1NBQ8N0W7 255 aaPredicted RBP8.27□□□□□ -1.09
CIITA-201ENST00000324288 TMEM35BQ8NCS4 154 aa8.27□□□□□ -1.09
CIITA-201ENST00000324288 RAD54LQ92698 747 aa8.27□□□□□ -1.09
CIITA-201ENST00000324288 SGF29Q96ES7 293 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms