RNA–Protein interactions for RNA: ENST00000324238.6

CRLF3-201, Transcript of cytokine receptor like factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRLF3, Length 2,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-201ENST00000324238 SUFUQ9UMX1 484 aa21.1■□□□□ 0.97
CRLF3-201ENST00000324238 NPM3O75607 178 aaKnown RBP21.1■□□□□ 0.97
CRLF3-201ENST00000324238 FDX1P10109 184 aa21.1■□□□□ 0.97
CRLF3-201ENST00000324238 NSFP46459 744 aaKnown RBP21.1■□□□□ 0.97
CRLF3-201ENST00000324238 GPC3P51654 580 aa21.1■□□□□ 0.97
CRLF3-201ENST00000324238 CYP24A1Q07973 514 aa21.1■□□□□ 0.97
CRLF3-201ENST00000324238 ARHGEF16Q5VV41 709 aa21.1■□□□□ 0.97
CRLF3-201ENST00000324238 ECHDC2Q86YB7 292 aa21.1■□□□□ 0.97
CRLF3-201ENST00000324238 RBM15Q96T37 977 aaKnown RBP eCLIP21.1■□□□□ 0.97
CRLF3-201ENST00000324238 SAE1Q9UBE0 346 aaPredicted RBP21.1■□□□□ 0.97
CRLF3-201ENST00000324238 GABBR1Q9UBS5 961 aa21.1■□□□□ 0.97
CRLF3-201ENST00000324238 PTPRJQ12913 1337 aa21.1■□□□□ 0.97
CRLF3-201ENST00000324238 UMODL1Q5DID0 1318 aa21.1■□□□□ 0.97
CRLF3-201ENST00000324238 MYPNQ86TC9 1320 aa21.1■□□□□ 0.97
CRLF3-201ENST00000324238 UNGP13051 313 aaPredicted RBP21.09■□□□□ 0.97
CRLF3-201ENST00000324238 RPL7AP62424 266 aaKnown RBP21.09■□□□□ 0.97
CRLF3-201ENST00000324238 FKBP1AP62942 108 aaKnown RBP21.09■□□□□ 0.97
CRLF3-201ENST00000324238 BAATQ14032 418 aaPredicted RBP21.09■□□□□ 0.97
CRLF3-201ENST00000324238 ZNF394Q53GI3 561 aa21.09■□□□□ 0.97
CRLF3-201ENST00000324238 TMEM270Q6UE05 265 aa21.09■□□□□ 0.97
CRLF3-201ENST00000324238 KCTD17Q8N5Z5 321 aa21.09■□□□□ 0.97
CRLF3-201ENST00000324238 ATL2Q8NHH9 583 aa21.09■□□□□ 0.97
CRLF3-201ENST00000324238 CEP83Q9Y592 693 aa21.09■□□□□ 0.97
CRLF3-201ENST00000324238 WDR91A4D1P6 747 aa21.09■□□□□ 0.97
CRLF3-201ENST00000324238 ASNSP08243 561 aa21.09■□□□□ 0.97
CRLF3-201ENST00000324238 SLC8A1P32418 973 aa21.09■□□□□ 0.97
CRLF3-201ENST00000324238 PTGER2P43116 358 aa21.09■□□□□ 0.97
CRLF3-201ENST00000324238 FAM160B2Q86V87 743 aa21.09■□□□□ 0.97
CRLF3-201ENST00000324238 PITPNM3Q9BZ71 974 aa21.09■□□□□ 0.97
CRLF3-201ENST00000324238 OSBPL8Q9BZF1 889 aa21.09■□□□□ 0.97
CRLF3-201ENST00000324238 NKIRAS1Q9NYS0 192 aa21.09■□□□□ 0.97
CRLF3-201ENST00000324238 QSER1Q2KHR3 1735 aa21.09■□□□□ 0.97
CRLF3-201ENST00000324238 PLSCR1O15162 318 aa21.09■□□□□ 0.97
CRLF3-201ENST00000324238 ZNF862O60290 1169 aa21.09■□□□□ 0.97
CRLF3-201ENST00000324238 IFNB1P01574 187 aa21.09■□□□□ 0.97
CRLF3-201ENST00000324238 HSD17B4P51659 736 aa21.09■□□□□ 0.97
CRLF3-201ENST00000324238 NCKAP1LP55160 1127 aa21.09■□□□□ 0.97
CRLF3-201ENST00000324238 GAD2Q05329 585 aa21.09■□□□□ 0.97
CRLF3-201ENST00000324238 PTK6Q13882 451 aa21.09■□□□□ 0.97
CRLF3-201ENST00000324238 TCEAL1Q15170 157 aa21.09■□□□□ 0.97
CRLF3-201ENST00000324238 TXNRD3NBQ6F5E7 133 aa21.09■□□□□ 0.97
CRLF3-201ENST00000324238 TTLL6Q8N841 843 aa21.09■□□□□ 0.97
CRLF3-201ENST00000324238 TRAIPQ9BWF2 469 aa21.09■□□□□ 0.97
CRLF3-201ENST00000324238 CXCL9Q07325 125 aa21.08■□□□□ 0.97
CRLF3-201ENST00000324238 MIS18BP1Q6P0N0 1132 aa21.08■□□□□ 0.97
CRLF3-201ENST00000324238 SAMD7Q7Z3H4 446 aa21.08■□□□□ 0.97
CRLF3-201ENST00000324238 C12orf56Q8IXR9 622 aa21.08■□□□□ 0.97
CRLF3-201ENST00000324238 MORC4Q8TE76 937 aa21.08■□□□□ 0.97
CRLF3-201ENST00000324238 ATG4CQ96DT6 458 aa21.08■□□□□ 0.97
CRLF3-201ENST00000324238 ETNK1Q9HBU6 452 aa21.08■□□□□ 0.97
CRLF3-201ENST00000324238 C1orf112Q9NSG2 853 aa21.08■□□□□ 0.97
CRLF3-201ENST00000324238 DNPEPQ9ULA0 475 aa21.08■□□□□ 0.97
CRLF3-201ENST00000324238 ARL2BPQ9Y2Y0 163 aa21.08■□□□□ 0.97
CRLF3-201ENST00000324238 CENPFP49454 3210 aa21.08■□□□□ 0.97
CRLF3-201ENST00000324238 GSTA1P08263 222 aa21.08■□□□□ 0.96
CRLF3-201ENST00000324238 DPEP1P16444 411 aa21.08■□□□□ 0.96
CRLF3-201ENST00000324238 TAC1P20366 129 aa21.08■□□□□ 0.96
CRLF3-201ENST00000324238 PAX7P23759 505 aa21.08■□□□□ 0.96
CRLF3-201ENST00000324238 BNIP1Q12981 228 aa21.08■□□□□ 0.96
CRLF3-201ENST00000324238 SYCP2LQ5T4T6 812 aa21.08■□□□□ 0.96
CRLF3-201ENST00000324238 SWSAP1Q6NVH7 229 aa21.08■□□□□ 0.96
CRLF3-201ENST00000324238 ANKMY2Q8IV38 441 aa21.08■□□□□ 0.96
CRLF3-201ENST00000324238 FLAD1Q8NFF5 587 aa21.08■□□□□ 0.96
CRLF3-201ENST00000324238 PLVAPQ9BX97 442 aa21.08■□□□□ 0.96
CRLF3-201ENST00000324238 ADAM22Q9P0K1 906 aa21.08■□□□□ 0.96
CRLF3-201ENST00000324238 UBIAD1Q9Y5Z9 338 aa21.08■□□□□ 0.96
CRLF3-201ENST00000324238 MUTP22033 750 aa21.07■□□□□ 0.96
CRLF3-201ENST00000324238 TARSP26639 723 aaKnown RBP21.07■□□□□ 0.96
CRLF3-201ENST00000324238 MAGEA4P43358 317 aa21.07■□□□□ 0.96
CRLF3-201ENST00000324238 NLRP11P59045 1033 aaKnown RBP21.07■□□□□ 0.96
CRLF3-201ENST00000324238 PSMC5P62195 406 aa21.07■□□□□ 0.96
CRLF3-201ENST00000324238 NOP14P78316 857 aaKnown RBP21.07■□□□□ 0.96
CRLF3-201ENST00000324238 PGM5Q15124 567 aa21.07■□□□□ 0.96
CRLF3-201ENST00000324238 PKN2Q16513 984 aaKnown RBP21.07■□□□□ 0.96
CRLF3-201ENST00000324238 ZNF449Q6P9G9 518 aa21.07■□□□□ 0.96
CRLF3-201ENST00000324238 ALG13Q9NP73 1137 aaKnown RBP21.07■□□□□ 0.96
CRLF3-201ENST00000324238 ZNF148Q9UQR1 794 aa21.07■□□□□ 0.96
CRLF3-201ENST00000324238 ZNFX1Q9P2E3 1918 aaKnown RBP21.07■□□□□ 0.96
CRLF3-201ENST00000324238 TRAF1Q13077 416 aa21.07■□□□□ 0.96
CRLF3-201ENST00000324238 GALNTL6Q49A17 601 aa21.07■□□□□ 0.96
CRLF3-201ENST00000324238 MAP4K3Q8IVH8 894 aa21.07■□□□□ 0.96
CRLF3-201ENST00000324238 GRID1Q9ULK0 1009 aa21.07■□□□□ 0.96
CRLF3-201ENST00000324238 PCDHB4Q9Y5E5 795 aa21.07■□□□□ 0.96
CRLF3-201ENST00000324238 RBBP6Q7Z6E9 1792 aaKnown RBP21.07■□□□□ 0.96
CRLF3-201ENST00000324238 EXOC1LA0A1B0GW35 172 aa21.06■□□□□ 0.96
CRLF3-201ENST00000324238 PLCB3Q01970 1234 aa21.06■□□□□ 0.96
CRLF3-201ENST00000324238 KLF6Q99612 283 aaPredicted RBP21.06■□□□□ 0.96
CRLF3-201ENST00000324238 VPS37BQ9H9H4 285 aa21.06■□□□□ 0.96
CRLF3-201ENST00000324238 A0A1W2PPM1 405 aa21.06■□□□□ 0.96
CRLF3-201ENST00000324238 TLR3O15455 904 aaKnown RBP21.06■□□□□ 0.96
CRLF3-201ENST00000324238 HLA-DRAP01903 254 aa21.06■□□□□ 0.96
CRLF3-201ENST00000324238 KRT15P19012 456 aa21.06■□□□□ 0.96
CRLF3-201ENST00000324238 DYNLT1P63172 113 aa21.06■□□□□ 0.96
CRLF3-201ENST00000324238 TLDC1Q6P9B6 456 aa21.06■□□□□ 0.96
CRLF3-201ENST00000324238 TMEM143Q96AN5 459 aa21.06■□□□□ 0.96
CRLF3-201ENST00000324238 GMLQ99445 158 aa21.06■□□□□ 0.96
CRLF3-201ENST00000324238 RPAP3Q9H6T3 665 aaPredicted RBP21.06■□□□□ 0.96
CRLF3-201ENST00000324238 KLHL14Q9P2G3 628 aa21.06■□□□□ 0.96
CRLF3-201ENST00000324238 ANKFY1Q9P2R3 1169 aa21.06■□□□□ 0.96
CRLF3-201ENST00000324238 HAO1Q9UJM8 370 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms