RNA–Protein interactions for RNA: ENST00000323853.9

SNRNP200-201, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP200, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-201ENST00000323853 PTK7Q13308 1070 aa11.47□□□□□ -0.57
SNRNP200-201ENST00000323853 RARS2Q5T160 578 aaKnown RBP11.47□□□□□ -0.57
SNRNP200-201ENST00000323853 CEP70Q8NHQ1 597 aa11.47□□□□□ -0.57
SNRNP200-201ENST00000323853 AGR3Q8TD06 166 aa11.47□□□□□ -0.57
SNRNP200-201ENST00000323853 SIK2Q9H0K1 926 aa11.47□□□□□ -0.57
SNRNP200-201ENST00000323853 ING2Q9H160 280 aa11.47□□□□□ -0.57
SNRNP200-201ENST00000323853 SMARCAD1Q9H4L7 1026 aa11.47□□□□□ -0.57
SNRNP200-201ENST00000323853 ZC3H7BQ9UGR2 993 aaKnown RBP11.47□□□□□ -0.57
SNRNP200-201ENST00000323853 ZNRF3Q9ULT6 936 aa11.47□□□□□ -0.57
SNRNP200-201ENST00000323853 PIN4Q9Y237 131 aaKnown RBP11.47□□□□□ -0.57
SNRNP200-201ENST00000323853 ADAMTS13Q76LX8 1427 aa11.47□□□□□ -0.57
SNRNP200-201ENST00000323853 CDH16O75309 829 aa11.47□□□□□ -0.57
SNRNP200-201ENST00000323853 RIBC1Q8N443 379 aaPredicted RBP11.47□□□□□ -0.57
SNRNP200-201ENST00000323853 ULK4Q96C45 1275 aa11.47□□□□□ -0.57
SNRNP200-201ENST00000323853 CYFIP2Q96F07 1278 aa11.47□□□□□ -0.57
SNRNP200-201ENST00000323853 SGSM3Q96HU1 749 aa11.47□□□□□ -0.57
SNRNP200-201ENST00000323853 ERP44Q9BS26 406 aa11.47□□□□□ -0.57
SNRNP200-201ENST00000323853 FAM129AQ9BZQ8 928 aa11.47□□□□□ -0.57
SNRNP200-201ENST00000323853 FOXP3Q9BZS1 431 aa11.47□□□□□ -0.57
SNRNP200-201ENST00000323853 ELP3Q9H9T3 547 aa11.47□□□□□ -0.57
SNRNP200-201ENST00000323853 HPSEQ9Y251 543 aa11.47□□□□□ -0.57
SNRNP200-201ENST00000323853 ADGRB1O14514 1584 aa11.47□□□□□ -0.57
SNRNP200-201ENST00000323853 NWD1Q149M9 1564 aa11.47□□□□□ -0.57
SNRNP200-201ENST00000323853 UBA6A0AVT1 1052 aaPredicted RBP11.47□□□□□ -0.57
SNRNP200-201ENST00000323853 PDGFRAP16234 1089 aa11.47□□□□□ -0.57
SNRNP200-201ENST00000323853 KLRC1P26715 233 aa11.47□□□□□ -0.57
SNRNP200-201ENST00000323853 MAGEA4P43358 317 aa11.47□□□□□ -0.57
SNRNP200-201ENST00000323853 SESN2P58004 480 aaPredicted RBP11.47□□□□□ -0.57
SNRNP200-201ENST00000323853 ZBTB17Q13105 803 aa11.47□□□□□ -0.57
SNRNP200-201ENST00000323853 DYNC1I2Q13409 638 aaKnown RBP11.47□□□□□ -0.57
SNRNP200-201ENST00000323853 ITPK1Q13572 414 aa11.47□□□□□ -0.57
SNRNP200-201ENST00000323853 VPS72Q15906 364 aa11.47□□□□□ -0.57
SNRNP200-201ENST00000323853 MICALL2Q8IY33 904 aa11.47□□□□□ -0.57
SNRNP200-201ENST00000323853 ARHGAP18Q8N392 663 aa11.47□□□□□ -0.57
SNRNP200-201ENST00000323853 CATSPER1Q8NEC5 780 aa11.47□□□□□ -0.57
SNRNP200-201ENST00000323853 RANBP17Q9H2T7 1088 aaKnown RBP11.47□□□□□ -0.57
SNRNP200-201ENST00000323853 GRIK1P39086 918 aa11.47□□□□□ -0.57
SNRNP200-201ENST00000323853 KCNA1Q09470 495 aa11.47□□□□□ -0.57
SNRNP200-201ENST00000323853 C4orf33Q8N1A6 199 aa11.47□□□□□ -0.57
SNRNP200-201ENST00000323853 MED15Q96RN5 788 aa11.47□□□□□ -0.57
SNRNP200-201ENST00000323853 MMTAG2Q9BU76 263 aaKnown RBP11.47□□□□□ -0.57
SNRNP200-201ENST00000323853 RUSC1Q9BVN2 902 aa11.47□□□□□ -0.57
SNRNP200-201ENST00000323853 IGSF9BQ9UPX0 1349 aa11.47□□□□□ -0.57
SNRNP200-201ENST00000323853 EEF2KO00418 725 aaKnown RBP11.47□□□□□ -0.57
SNRNP200-201ENST00000323853 TMCC1O94876 653 aa11.47□□□□□ -0.57
SNRNP200-201ENST00000323853 CDC42EP1Q00587 391 aa11.47□□□□□ -0.57
SNRNP200-201ENST00000323853 TMEM259Q4ZIN3 620 aa11.47□□□□□ -0.57
SNRNP200-201ENST00000323853 ELMSAN1Q6PJG2 1045 aa11.47□□□□□ -0.57
SNRNP200-201ENST00000323853 SPATA2LQ8IUW3 424 aaPredicted RBP11.47□□□□□ -0.57
SNRNP200-201ENST00000323853 ANKS1AQ92625 1134 aa11.47□□□□□ -0.57
SNRNP200-201ENST00000323853 FAM118BQ9BPY3 351 aa11.47□□□□□ -0.57
SNRNP200-201ENST00000323853 TRAF3IP3Q9Y228 551 aa11.47□□□□□ -0.57
SNRNP200-201ENST00000323853 SNX5Q9Y5X3 404 aa11.47□□□□□ -0.57
SNRNP200-201ENST00000323853 PLEKP08567 350 aaPredicted RBP11.46□□□□□ -0.57
SNRNP200-201ENST00000323853 FOXD4Q12950 439 aaPredicted RBP11.46□□□□□ -0.57
SNRNP200-201ENST00000323853 PTGISQ16647 500 aa11.46□□□□□ -0.57
SNRNP200-201ENST00000323853 ZNF280CQ8ND82 737 aa11.46□□□□□ -0.57
SNRNP200-201ENST00000323853 ASAP3Q8TDY4 903 aa11.46□□□□□ -0.57
SNRNP200-201ENST00000323853 ELMO2Q96JJ3 720 aa11.46□□□□□ -0.57
SNRNP200-201ENST00000323853 PNKPQ96T60 521 aa11.46□□□□□ -0.57
SNRNP200-201ENST00000323853 EGFL8Q99944 293 aa11.46□□□□□ -0.57
SNRNP200-201ENST00000323853 SYCE1LA8MT33 242 aa11.46□□□□□ -0.57
SNRNP200-201ENST00000323853 PON1P27169 355 aa11.46□□□□□ -0.57
SNRNP200-201ENST00000323853 PPP1R36Q96LQ0 422 aa11.46□□□□□ -0.57
SNRNP200-201ENST00000323853 METTL5Q9NRN9 209 aaKnown RBP11.46□□□□□ -0.57
SNRNP200-201ENST00000323853 PCDHB2Q9Y5E7 798 aa11.46□□□□□ -0.57
SNRNP200-201ENST00000323853 MSH4O15457 936 aa11.46□□□□□ -0.57
SNRNP200-201ENST00000323853 GPD1P21695 349 aa11.46□□□□□ -0.57
SNRNP200-201ENST00000323853 TOB1P50616 345 aaPredicted RBP11.46□□□□□ -0.57
SNRNP200-201ENST00000323853 OCA2Q04671 838 aa11.46□□□□□ -0.57
SNRNP200-201ENST00000323853 KDSRQ06136 332 aa11.46□□□□□ -0.57
SNRNP200-201ENST00000323853 DNAL1Q4LDG9 190 aa11.46□□□□□ -0.57
SNRNP200-201ENST00000323853 FBXW10Q5XX13 1052 aa11.46□□□□□ -0.57
SNRNP200-201ENST00000323853 ACAD10Q6JQN1 1059 aa11.46□□□□□ -0.57
SNRNP200-201ENST00000323853 C16orf87Q6PH81 154 aa11.46□□□□□ -0.57
SNRNP200-201ENST00000323853 RNF217Q8TC41 542 aa11.46□□□□□ -0.57
SNRNP200-201ENST00000323853 YY1AP1Q9H869 796 aa11.46□□□□□ -0.57
SNRNP200-201ENST00000323853 PCMTD2Q9NV79 361 aa11.46□□□□□ -0.57
SNRNP200-201ENST00000323853 TSR3Q9UJK0 312 aaKnown RBP11.46□□□□□ -0.57
SNRNP200-201ENST00000323853 ALG6Q9Y672 507 aa11.46□□□□□ -0.57
SNRNP200-201ENST00000323853 RECQLP46063 649 aaPredicted RBP11.46□□□□□ -0.58
SNRNP200-201ENST00000323853 HERVK_113P62684 666 aa11.46□□□□□ -0.58
SNRNP200-201ENST00000323853 STX3Q13277 289 aa11.46□□□□□ -0.58
SNRNP200-201ENST00000323853 ZNF235Q14590 738 aa11.46□□□□□ -0.58
SNRNP200-201ENST00000323853 GOLGA7BQ2TAP0 167 aa11.46□□□□□ -0.58
SNRNP200-201ENST00000323853 ATF7IP2Q5U623 682 aa11.46□□□□□ -0.58
SNRNP200-201ENST00000323853 TEX13BQ9BXU2 312 aa11.46□□□□□ -0.58
SNRNP200-201ENST00000323853 IRAK4Q9NWZ3 460 aa11.46□□□□□ -0.58
SNRNP200-201ENST00000323853 VWDEQ8N2E2 1590 aa11.46□□□□□ -0.58
SNRNP200-201ENST00000323853 EIF4E1BA6NMX2 242 aaKnown RBP11.46□□□□□ -0.58
SNRNP200-201ENST00000323853 KLRK1P26718 216 aa11.46□□□□□ -0.58
SNRNP200-201ENST00000323853 HSD17B3P37058 310 aa11.46□□□□□ -0.58
SNRNP200-201ENST00000323853 HSD17B4P51659 736 aa11.46□□□□□ -0.58
SNRNP200-201ENST00000323853 TRADDQ15628 312 aa11.46□□□□□ -0.58
SNRNP200-201ENST00000323853 MFSD14CQ5VZR4 134 aa11.46□□□□□ -0.58
SNRNP200-201ENST00000323853 ZNF526Q8TF50 670 aaPredicted RBP11.46□□□□□ -0.58
SNRNP200-201ENST00000323853 MTBPQ96DY7 904 aa11.46□□□□□ -0.58
SNRNP200-201ENST00000323853 RMDN2Q96LZ7 410 aa11.46□□□□□ -0.58
SNRNP200-201ENST00000323853 OSBPL8Q9BZF1 889 aa11.46□□□□□ -0.58
SNRNP200-201ENST00000323853 THAP2Q9H0W7 228 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms