RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 SNRNP27Q8WVK2 155 aaKnown RBP16.13■□□□□ 0.17
VARS2-201ENST00000321897 RUBCNQ92622 972 aa16.13■□□□□ 0.17
VARS2-201ENST00000321897 MYOZ2Q9NPC6 264 aa16.13■□□□□ 0.17
VARS2-201ENST00000321897 GRIN2DO15399 1336 aa16.13■□□□□ 0.17
VARS2-201ENST00000321897 PRLRP16471 622 aa16.13■□□□□ 0.17
VARS2-201ENST00000321897 RFC1P35251 1148 aaPredicted RBP16.13■□□□□ 0.17
VARS2-201ENST00000321897 C1orf228Q6PIY5 440 aa16.13■□□□□ 0.17
VARS2-201ENST00000321897 TRIM50Q86XT4 487 aa16.13■□□□□ 0.17
VARS2-201ENST00000321897 FAM163AQ96GL9 167 aaPredicted RBP16.13■□□□□ 0.17
VARS2-201ENST00000321897 POLR3CQ9BUI4 534 aaPredicted RBP16.13■□□□□ 0.17
VARS2-201ENST00000321897 PABPC3Q9H361 631 aaKnown RBP16.13■□□□□ 0.17
VARS2-201ENST00000321897 CYP4F11Q9HBI6 524 aa16.13■□□□□ 0.17
VARS2-201ENST00000321897 PNMA3Q9UL41 463 aa16.13■□□□□ 0.17
VARS2-201ENST00000321897 INPP5FQ9Y2H2 1132 aa16.13■□□□□ 0.17
VARS2-201ENST00000321897 BAZ2AQ9UIF9 1905 aaKnown RBP16.13■□□□□ 0.17
VARS2-201ENST00000321897 CCDC195A0A1B0GUA6 201 aa16.13■□□□□ 0.17
VARS2-201ENST00000321897 SLC16A3O15427 465 aaKnown RBP16.13■□□□□ 0.17
VARS2-201ENST00000321897 TMEM253P0C7T8 217 aa16.13■□□□□ 0.17
VARS2-201ENST00000321897 FAM160B1Q5W0V3 765 aa16.13■□□□□ 0.17
VARS2-201ENST00000321897 SV2AQ7L0J3 742 aa16.13■□□□□ 0.17
VARS2-201ENST00000321897 RBM46Q8TBY0 533 aaKnown RBP16.13■□□□□ 0.17
VARS2-201ENST00000321897 MED10Q9BTT4 135 aa16.13■□□□□ 0.17
VARS2-201ENST00000321897 FBXO40Q9UH90 709 aa16.13■□□□□ 0.17
VARS2-201ENST00000321897 RGPD1P0DJD0 1748 aa16.12■□□□□ 0.17
VARS2-201ENST00000321897 SHOX2O60902 331 aaPredicted RBP16.12■□□□□ 0.17
VARS2-201ENST00000321897 ATP9AO75110 1047 aa16.12■□□□□ 0.17
VARS2-201ENST00000321897 RARRES1P49788 294 aa16.12■□□□□ 0.17
VARS2-201ENST00000321897 KDSRQ06136 332 aa16.12■□□□□ 0.17
VARS2-201ENST00000321897 NFX1Q12986 1120 aaKnown RBP16.12■□□□□ 0.17
VARS2-201ENST00000321897 P3H1Q32P28 736 aa16.12■□□□□ 0.17
VARS2-201ENST00000321897 ZNF667Q5HYK9 610 aa16.12■□□□□ 0.17
VARS2-201ENST00000321897 MSL3Q8N5Y2 521 aaKnown RBP16.12■□□□□ 0.17
VARS2-201ENST00000321897 MORC4Q8TE76 937 aa16.12■□□□□ 0.17
VARS2-201ENST00000321897 GGA3Q9NZ52 723 aa16.12■□□□□ 0.17
VARS2-201ENST00000321897 GAKO14976 1311 aa16.12■□□□□ 0.17
VARS2-201ENST00000321897 PGK2P07205 417 aa16.12■□□□□ 0.17
VARS2-201ENST00000321897 FAXCQ5TGI0 409 aa16.12■□□□□ 0.17
VARS2-201ENST00000321897 OR6B3Q8NGW1 331 aa16.12■□□□□ 0.17
VARS2-201ENST00000321897 TSNARE1Q96NA8 513 aa16.12■□□□□ 0.17
VARS2-201ENST00000321897 TMX2Q9Y320 296 aa16.12■□□□□ 0.17
VARS2-201ENST00000321897 ZNF711Q9Y462 761 aa16.12■□□□□ 0.17
VARS2-201ENST00000321897 CIITAP33076 1130 aa16.12■□□□□ 0.17
VARS2-201ENST00000321897 PAPOLAP51003 745 aaKnown RBP16.12■□□□□ 0.17
VARS2-201ENST00000321897 NCOA4Q13772 614 aa16.12■□□□□ 0.17
VARS2-201ENST00000321897 C1orf146Q5VVC0 180 aa16.12■□□□□ 0.17
VARS2-201ENST00000321897 RBBP8NLQ8NC74 664 aaPredicted RBP16.12■□□□□ 0.17
VARS2-201ENST00000321897 ZSWIM2Q8NEG5 633 aa16.12■□□□□ 0.17
VARS2-201ENST00000321897 SLC13A1Q9BZW2 595 aa16.12■□□□□ 0.17
VARS2-201ENST00000321897 DNAJC18Q9H819 358 aa16.12■□□□□ 0.17
VARS2-201ENST00000321897 MARCOQ9UEW3 520 aaPredicted RBP16.12■□□□□ 0.17
VARS2-201ENST00000321897 TBX20Q9UMR3 447 aa16.12■□□□□ 0.17
VARS2-201ENST00000321897 CSPG5O95196 566 aa16.11■□□□□ 0.17
VARS2-201ENST00000321897 SETSIPP0DME0 302 aa16.11■□□□□ 0.17
VARS2-201ENST00000321897 PYGMP11217 842 aa16.11■□□□□ 0.17
VARS2-201ENST00000321897 TMC3Q7Z5M5 1100 aa16.11■□□□□ 0.17
VARS2-201ENST00000321897 TMEM35BQ8NCS4 154 aa16.11■□□□□ 0.17
VARS2-201ENST00000321897 SLC5A5Q92911 643 aa16.11■□□□□ 0.17
VARS2-201ENST00000321897 ATXN7L3BQ96GX2 97 aa16.11■□□□□ 0.17
VARS2-201ENST00000321897 KDM4CQ9H3R0 1056 aa16.11■□□□□ 0.17
VARS2-201ENST00000321897 RPF1Q9H9Y2 349 aaKnown RBP16.11■□□□□ 0.17
VARS2-201ENST00000321897 ANLNQ9NQW6 1124 aa16.11■□□□□ 0.17
VARS2-201ENST00000321897 MRPL42Q9Y6G3 142 aaKnown RBP16.11■□□□□ 0.17
VARS2-201ENST00000321897 ANKRD63C9JTQ0 380 aa16.11■□□□□ 0.17
VARS2-201ENST00000321897 DNAJC6O75061 913 aa16.11■□□□□ 0.17
VARS2-201ENST00000321897 STAT5BP51692 787 aa16.11■□□□□ 0.17
VARS2-201ENST00000321897 SEPT6Q14141 434 aa16.11■□□□□ 0.17
VARS2-201ENST00000321897 CDHR1Q96JP9 859 aa16.11■□□□□ 0.17
VARS2-201ENST00000321897 ACAD9Q9H845 621 aa16.11■□□□□ 0.17
VARS2-201ENST00000321897 ELP3Q9H9T3 547 aa16.11■□□□□ 0.17
VARS2-201ENST00000321897 GDF3Q9NR23 364 aa16.11■□□□□ 0.17
VARS2-201ENST00000321897 FNDC3AQ9Y2H6 1198 aaKnown RBP16.11■□□□□ 0.17
VARS2-201ENST00000321897 ASTN1O14525 1302 aa16.11■□□□□ 0.17
VARS2-201ENST00000321897 FOXO6A8MYZ6 492 aa16.11■□□□□ 0.17
VARS2-201ENST00000321897 MCF2LO15068 1137 aa16.11■□□□□ 0.17
VARS2-201ENST00000321897 MT-ND3P03897 115 aa16.11■□□□□ 0.17
VARS2-201ENST00000321897 HSPA6P17066 643 aa16.11■□□□□ 0.17
VARS2-201ENST00000321897 ITGA8P53708 1063 aa16.11■□□□□ 0.17
VARS2-201ENST00000321897 RCN1Q15293 331 aa16.11■□□□□ 0.17
VARS2-201ENST00000321897 GEN1Q17RS7 908 aa16.11■□□□□ 0.17
VARS2-201ENST00000321897 OLFML2BQ68BL8 750 aa16.11■□□□□ 0.17
VARS2-201ENST00000321897 SYTL5Q8TDW5 730 aaPredicted RBP16.11■□□□□ 0.17
VARS2-201ENST00000321897 ATP8B4Q8TF62 1192 aa16.11■□□□□ 0.17
VARS2-201ENST00000321897 RBM15Q96T37 977 aaKnown RBP eCLIP16.11■□□□□ 0.172e-10■■□□□ 13.6
VARS2-201ENST00000321897 HACL1Q9UJ83 578 aa16.11■□□□□ 0.17
VARS2-201ENST00000321897 UBE4BO95155 1302 aa16.1■□□□□ 0.17
VARS2-201ENST00000321897 MYH10P35580 1976 aa16.1■□□□□ 0.17
VARS2-201ENST00000321897 CYP11B1P15538 503 aa16.1■□□□□ 0.17
VARS2-201ENST00000321897 ITGB5P18084 799 aa16.1■□□□□ 0.17
VARS2-201ENST00000321897 GTF2H1P32780 548 aa16.1■□□□□ 0.17
VARS2-201ENST00000321897 BTKQ06187 659 aa16.1■□□□□ 0.17
VARS2-201ENST00000321897 FAM102AQ5T9C2 384 aaPredicted RBP16.1■□□□□ 0.17
VARS2-201ENST00000321897 BZW1Q7L1Q6 419 aaKnown RBP16.1■□□□□ 0.17
VARS2-201ENST00000321897 C1orf131Q8NDD1 294 aaKnown RBP16.1■□□□□ 0.17
VARS2-201ENST00000321897 PSPC1Q8WXF1 523 aaKnown RBP16.1■□□□□ 0.17
VARS2-201ENST00000321897 IFT122Q9HBG6 1241 aa16.1■□□□□ 0.17
VARS2-201ENST00000321897 KCNMB3Q9NPA1 279 aa16.1■□□□□ 0.17
VARS2-201ENST00000321897 AIPL1Q9NZN9 384 aa16.1■□□□□ 0.17
VARS2-201ENST00000321897 FAM187AA6NFU0 413 aa16.1■□□□□ 0.17
VARS2-201ENST00000321897 M0QYV0 167 aa16.1■□□□□ 0.17
VARS2-201ENST00000321897 NOL4O94818 638 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms