RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 SCN4BQ8IWT1 228 aa17.68■□□□□ 0.42
SMCHD1-201ENST00000320876 ZNF608Q9ULD9 1512 aaPredicted RBP17.68■□□□□ 0.42
SMCHD1-201ENST00000320876 ABCB11O95342 1321 aa17.68■□□□□ 0.42
SMCHD1-201ENST00000320876 MYH15Q9Y2K3 1946 aa17.68■□□□□ 0.42
SMCHD1-201ENST00000320876 IL6STP40189 918 aaPredicted RBP17.68■□□□□ 0.42
SMCHD1-201ENST00000320876 TRIM13O60858 407 aa17.67■□□□□ 0.42
SMCHD1-201ENST00000320876 DUOXA2Q1HG44 320 aa17.67■□□□□ 0.42
SMCHD1-201ENST00000320876 TWF2Q6IBS0 349 aaKnown RBP17.67■□□□□ 0.42
SMCHD1-201ENST00000320876 GPD1LQ8N335 351 aa17.67■□□□□ 0.42
SMCHD1-201ENST00000320876 AGPAT1Q99943 283 aa17.67■□□□□ 0.42
SMCHD1-201ENST00000320876 PSMC3P17980 439 aa17.67■□□□□ 0.42
SMCHD1-201ENST00000320876 STAT3P40763 770 aa17.67■□□□□ 0.42
SMCHD1-201ENST00000320876 KCNK10P57789 538 aa17.67■□□□□ 0.42
SMCHD1-201ENST00000320876 CCDC60Q8IWA6 550 aaPredicted RBP17.67■□□□□ 0.42
SMCHD1-201ENST00000320876 TASP1Q9H6P5 420 aa17.67■□□□□ 0.42
SMCHD1-201ENST00000320876 RBAKQ9NYW8 714 aaPredicted RBP17.67■□□□□ 0.42
SMCHD1-201ENST00000320876 NCALDP61601 193 aa17.67■□□□□ 0.42
SMCHD1-201ENST00000320876 KRT76Q01546 638 aa17.67■□□□□ 0.42
SMCHD1-201ENST00000320876 RPS6P62753 249 aaKnown RBP17.67■□□□□ 0.42
SMCHD1-201ENST00000320876 KBTBD12Q3ZCT8 623 aa17.67■□□□□ 0.42
SMCHD1-201ENST00000320876 STK33Q9BYT3 514 aa17.67■□□□□ 0.42
SMCHD1-201ENST00000320876 VIRMAQ69YN4 1812 aaKnown RBP17.67■□□□□ 0.42
SMCHD1-201ENST00000320876 MYH3P11055 1940 aa17.67■□□□□ 0.42
SMCHD1-201ENST00000320876 SYTL3Q4VX76 610 aa17.67■□□□□ 0.42
SMCHD1-201ENST00000320876 TRMT2AQ8IZ69 625 aaKnown RBP17.67■□□□□ 0.42
SMCHD1-201ENST00000320876 KIF2BQ8N4N8 673 aa17.67■□□□□ 0.42
SMCHD1-201ENST00000320876 RMDN3Q96TC7 470 aa17.67■□□□□ 0.42
SMCHD1-201ENST00000320876 EXOSC4Q9NPD3 245 aaKnown RBP17.67■□□□□ 0.42
SMCHD1-201ENST00000320876 TJP2Q9UDY2 1190 aa17.67■□□□□ 0.42
SMCHD1-201ENST00000320876 FAM153AQ9UHL3 310 aa17.67■□□□□ 0.42
SMCHD1-201ENST00000320876 GLMNQ92990 594 aa17.67■□□□□ 0.42
SMCHD1-201ENST00000320876 PCDHA6Q9UN73 950 aa17.67■□□□□ 0.42
SMCHD1-201ENST00000320876 PCDHA8Q9Y5H6 950 aa17.67■□□□□ 0.42
SMCHD1-201ENST00000320876 TRIM49P0CI25 452 aa17.67■□□□□ 0.42
SMCHD1-201ENST00000320876 TRIM49CP0CI26 452 aa17.67■□□□□ 0.42
SMCHD1-201ENST00000320876 SLC9A5Q14940 896 aa17.67■□□□□ 0.42
SMCHD1-201ENST00000320876 LRRC8DQ7L1W4 858 aa17.67■□□□□ 0.42
SMCHD1-201ENST00000320876 ATPAF2Q8N5M1 289 aa17.67■□□□□ 0.42
SMCHD1-201ENST00000320876 VPS37AQ8NEZ2 397 aa17.67■□□□□ 0.42
SMCHD1-201ENST00000320876 CALML6Q8TD86 181 aa17.67■□□□□ 0.42
SMCHD1-201ENST00000320876 POTEFA5A3E0 1075 aa17.66■□□□□ 0.42
SMCHD1-201ENST00000320876 POTEIP0CG38 1075 aa17.66■□□□□ 0.42
SMCHD1-201ENST00000320876 ERFP50548 548 aa17.66■□□□□ 0.42
SMCHD1-201ENST00000320876 POTEGQ6S5H5 508 aa17.66■□□□□ 0.42
SMCHD1-201ENST00000320876 POTEEQ6S8J3 1075 aa17.66■□□□□ 0.42
SMCHD1-201ENST00000320876 ANKRD7Q92527 254 aa17.66■□□□□ 0.42
SMCHD1-201ENST00000320876 ELMO2Q96JJ3 720 aa17.66■□□□□ 0.42
SMCHD1-201ENST00000320876 ZNF341Q9BYN7 854 aa17.66■□□□□ 0.42
SMCHD1-201ENST00000320876 TCN1P20061 433 aaPredicted RBP17.66■□□□□ 0.42
SMCHD1-201ENST00000320876 DCAF4L1Q3SXM0 396 aa17.66■□□□□ 0.42
SMCHD1-201ENST00000320876 OSBPL10Q9BXB5 764 aa17.66■□□□□ 0.42
SMCHD1-201ENST00000320876 DBR1Q9UK59 544 aaKnown RBP17.66■□□□□ 0.42
SMCHD1-201ENST00000320876 UBXN8O00124 270 aa17.66■□□□□ 0.42
SMCHD1-201ENST00000320876 CDK17Q00537 523 aa17.66■□□□□ 0.42
SMCHD1-201ENST00000320876 RAD51Q06609 339 aa17.66■□□□□ 0.42
SMCHD1-201ENST00000320876 TXNRD1Q16881 649 aa17.66■□□□□ 0.42
SMCHD1-201ENST00000320876 THNSL1Q8IYQ7 743 aa17.66■□□□□ 0.42
SMCHD1-201ENST00000320876 KLHL31Q9H511 634 aa17.66■□□□□ 0.42
SMCHD1-201ENST00000320876 GEMIN8Q9NWZ8 242 aaKnown RBP17.66■□□□□ 0.42
SMCHD1-201ENST00000320876 NCAPD2Q15021 1401 aa17.66■□□□□ 0.42
SMCHD1-201ENST00000320876 NEDD4P46934 1319 aa17.66■□□□□ 0.42
SMCHD1-201ENST00000320876 IQCA1LA6NCM1 817 aa17.66■□□□□ 0.42
SMCHD1-201ENST00000320876 PDZK1P1A8MUH7 402 aa17.66■□□□□ 0.42
SMCHD1-201ENST00000320876 POLBP06746 335 aa17.66■□□□□ 0.42
SMCHD1-201ENST00000320876 COBLL1Q53SF7 1204 aa17.66■□□□□ 0.42
SMCHD1-201ENST00000320876 GLYCTKQ8IVS8 523 aa17.66■□□□□ 0.42
SMCHD1-201ENST00000320876 KLHL4Q9C0H6 718 aa17.66■□□□□ 0.42
SMCHD1-201ENST00000320876 KLHL25Q9H0H3 589 aa17.66■□□□□ 0.42
SMCHD1-201ENST00000320876 ADCY10Q96PN6 1610 aa17.66■□□□□ 0.42
SMCHD1-201ENST00000320876 POTECB2RU33 542 aa17.66■□□□□ 0.42
SMCHD1-201ENST00000320876 SUPT3HB4E1H0 165 aa17.66■□□□□ 0.42
SMCHD1-201ENST00000320876 PRR29P0C7W0 189 aa17.66■□□□□ 0.42
SMCHD1-201ENST00000320876 APPL2Q8NEU8 664 aa17.66■□□□□ 0.42
SMCHD1-201ENST00000320876 DYNLL2Q96FJ2 89 aa17.66■□□□□ 0.42
SMCHD1-201ENST00000320876 SLC16A4O15374 487 aa17.66■□□□□ 0.42
SMCHD1-201ENST00000320876 RBM46Q8TBY0 533 aaKnown RBP17.66■□□□□ 0.42
SMCHD1-201ENST00000320876 LXNQ9BS40 222 aa17.66■□□□□ 0.42
SMCHD1-201ENST00000320876 POLR3FQ9H1D9 316 aaPredicted RBP17.66■□□□□ 0.42
SMCHD1-201ENST00000320876 ZNF302Q9NR11 478 aa17.66■□□□□ 0.42
SMCHD1-201ENST00000320876 LIMA1Q9UHB6 759 aaKnown RBP17.66■□□□□ 0.42
SMCHD1-201ENST00000320876 ATP10AO60312 1499 aa17.66■□□□□ 0.42
SMCHD1-201ENST00000320876 A0A1B0GTH6 734 aa17.66■□□□□ 0.42
SMCHD1-201ENST00000320876 NCF4Q15080 339 aa17.66■□□□□ 0.42
SMCHD1-201ENST00000320876 CARD9Q9H257 536 aa17.66■□□□□ 0.42
SMCHD1-201ENST00000320876 EPC1Q9H2F5 836 aa17.66■□□□□ 0.42
SMCHD1-201ENST00000320876 BARHL2Q9NY43 387 aa17.66■□□□□ 0.42
SMCHD1-201ENST00000320876 HIST1H2AGP0C0S8 130 aaPredicted RBP17.65■□□□□ 0.42
SMCHD1-201ENST00000320876 HIST1H2ADP20671 130 aa17.65■□□□□ 0.42
SMCHD1-201ENST00000320876 MEI1Q5TIA1 1274 aa17.65■□□□□ 0.42
SMCHD1-201ENST00000320876 CCDC81Q6ZN84 652 aa17.65■□□□□ 0.42
SMCHD1-201ENST00000320876 HIST1H2AHQ96KK5 128 aa17.65■□□□□ 0.42
SMCHD1-201ENST00000320876 HIST1H2AJQ99878 128 aa17.65■□□□□ 0.42
SMCHD1-201ENST00000320876 H2AFJQ9BTM1 129 aa17.65■□□□□ 0.42
SMCHD1-201ENST00000320876 LY9Q9HBG7 655 aa17.65■□□□□ 0.42
SMCHD1-201ENST00000320876 CLRN2A0PK11 232 aa17.65■□□□□ 0.42
SMCHD1-201ENST00000320876 BBOX1O75936 387 aa17.65■□□□□ 0.42
SMCHD1-201ENST00000320876 TARSP26639 723 aaKnown RBP17.65■□□□□ 0.42
SMCHD1-201ENST00000320876 SNAP25P60880 206 aa17.65■□□□□ 0.42
SMCHD1-201ENST00000320876 FAM49AQ9H0Q0 323 aaPredicted RBP17.65■□□□□ 0.42
SMCHD1-201ENST00000320876 FEM1BQ9UK73 627 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms